RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 GOLGA6AQ9NYA3 693 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 PCDHB2Q9Y5E7 798 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 IGKV6D-21A0A0A0MT36 114 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 MYO1FO00160 1098 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 DDX3XO00571 662 aaKnown RBP eCLIP16.89■□□□□ 0.29
PDGFB-201ENST00000331163 LCP1P13796 627 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 SGSM1Q2NKQ1 1148 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 ZNF618Q5T7W0 954 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 KCTD16Q68DU8 428 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 ZNF467Q7Z7K2 595 aaPredicted RBP16.89■□□□□ 0.29
PDGFB-201ENST00000331163 WNT8BQ93098 351 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 RUFY1Q96T51 708 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 ZBED2Q9BTP6 218 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 TMEM106CQ9BVX2 250 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 AGO3Q9H9G7 860 aaKnown RBP16.89■□□□□ 0.29
PDGFB-201ENST00000331163 REXO2Q9Y3B8 237 aaKnown RBP16.89■□□□□ 0.29
PDGFB-201ENST00000331163 CORO7P57737 925 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 SLC10A6Q3KNW5 377 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 SND1Q7KZF4 910 aaKnown RBP eCLIP16.89■□□□□ 0.29
PDGFB-201ENST00000331163 TADA2BQ86TJ2 420 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 NUP85Q9BW27 656 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 ZWILCHQ9H900 591 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 NGRNQ9NPE2 291 aaKnown RBP16.89■□□□□ 0.29
PDGFB-201ENST00000331163 PI4K2BG5E9Z4 385 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 CFHP08603 1231 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 MRPS6P82932 125 aaKnown RBP16.88■□□□□ 0.29
PDGFB-201ENST00000331163 MARCH8Q5T0T0 291 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 ERICH1Q86X53 443 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 TRIM58Q8NG06 486 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 SLC35G2Q8TBE7 412 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 HVCN1Q96D96 273 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 TSGA10Q9BZW7 698 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 NIF3L1Q9GZT8 377 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 SDK1Q7Z5N4 2213 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 ANKRD62A6NC57 917 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 CYP2C18P33260 490 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 RBP5P82980 135 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 PSMD6Q15008 389 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 LIN9Q5TKA1 542 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 EMC1Q8N766 993 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 PGLYRP2Q96PD5 576 aa16.88■□□□□ 0.29
PDGFB-201ENST00000331163 APOBEC3GQ9HC16 384 aaKnown RBP16.88■□□□□ 0.29
PDGFB-201ENST00000331163 BZW2Q9Y6E2 419 aaKnown RBP16.88■□□□□ 0.29
PDGFB-201ENST00000331163 MAP3K6O95382 1288 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 CCDC142Q17RM4 750 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 RNF187Q5TA31 235 aaPredicted RBP16.87■□□□□ 0.29
PDGFB-201ENST00000331163 KIAA1841Q6NSI8 718 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 TAF2Q6P1X5 1199 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 CRELD2Q6UXH1 353 aaPredicted RBP16.87■□□□□ 0.29
PDGFB-201ENST00000331163 CCDC33Q8N5R6 958 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 RNF34Q969K3 372 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 AMFRQ9UKV5 643 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 PTPN22Q9Y2R2 807 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 CYBAP13498 195 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 DNAJB2P25686 324 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 SF3A3Q12874 501 aaKnown RBP eCLIP16.87■□□□□ 0.29
PDGFB-201ENST00000331163 ZACNQ401N2 412 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 MYCBPQ99417 103 aaPredicted RBP16.87■□□□□ 0.29
PDGFB-201ENST00000331163 TMEM134Q9H6X4 195 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 TNFSF13BQ9Y275 285 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 KIAA1217Q5T5P2 1943 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 RANBP2P49792 3224 aaKnown RBP16.87■□□□□ 0.29
PDGFB-201ENST00000331163 FGFR1P11362 822 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 GNGT1P63211 74 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 IFI16Q16666 785 aaKnown RBP16.87■□□□□ 0.29
PDGFB-201ENST00000331163 ARHGEF26Q96DR7 871 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 TRIM7Q9C029 511 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 IPPQ9Y573 584 aa16.87■□□□□ 0.29
PDGFB-201ENST00000331163 TAF12Q16514 161 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 SMTNL2Q2TAL5 461 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 MAP9Q49MG5 647 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 C1orf127Q8N9H9 656 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 CCDC114Q96M63 670 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.86■□□□□ 0.29
PDGFB-201ENST00000331163 PDLIM7Q9NR12 457 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 WHAMMP3Q1A5X7 153 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 MSANTD4Q8NCY6 345 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 COG1Q8WTW3 980 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 RNF25Q96BH1 459 aaPredicted RBP16.86■□□□□ 0.29
PDGFB-201ENST00000331163 B3GALT6Q96L58 329 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 SALL4Q9UJQ4 1053 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 GOLGA6BA6NDN3 693 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 SCP2P22307 547 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 RRM1P23921 792 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 NDST1P52848 882 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 MTM1Q13496 603 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 DNAJC24Q6P3W2 148 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 ZNF354CQ86Y25 554 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 PAF1Q8N7H5 531 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 HELQQ8TDG4 1101 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 TMC2Q8TDI7 906 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 HNRNPLLQ8WVV9 542 aaKnown RBP16.86■□□□□ 0.29
PDGFB-201ENST00000331163 KATNBL1Q9H079 304 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 TMEM39AQ9NV64 488 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 TRPV2Q9Y5S1 764 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 FAM169AQ9Y6X4 670 aa16.86■□□□□ 0.29
PDGFB-201ENST00000331163 ACRP10323 421 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 MAP2K2P36507 400 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 SURF1Q15526 300 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 TRIP13Q15645 432 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms