RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 C16orf89Q6UX73 402 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 CATSPER3Q86XQ3 398 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 CLEC10AQ8IUN9 316 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 TMCO5AQ8N6Q1 288 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 DBR1Q9UK59 544 aaKnown RBP14.19□□□□□ -0.14
SF3A1-201ENST00000215793 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 SYNDIG1LA6NDD5 238 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 PRPF4O43172 522 aaKnown RBP eCLIP14.19□□□□□ -0.14
SF3A1-201ENST00000215793 PDGFRBP09619 1106 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 GPD1P21695 349 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 RGS4P49798 205 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 FBXW4P57775 412 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 GTF2H3Q13889 308 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 KYNUQ16719 465 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 GPAT2Q6NUI2 795 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 SHCBP1Q8NEM2 672 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 FEZF2Q8TBJ5 459 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.19□□□□□ -0.144e-12■■■□□ 16.8
SF3A1-201ENST00000215793 HNRNPRO43390 633 aaKnown RBP14.19□□□□□ -0.14
SF3A1-201ENST00000215793 GAS2O43903 313 aaKnown RBP14.19□□□□□ -0.14
SF3A1-201ENST00000215793 CYP2C8P10632 490 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 KLRC1P26715 233 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 CHRNA5P30532 468 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 SNAPC2Q13487 334 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 PLA2G4FQ68DD2 849 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 RFX8Q6ZV50 586 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 SRLQ86TD4 932 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 MARCH10Q8NA82 808 aaPredicted RBP14.19□□□□□ -0.14
SF3A1-201ENST00000215793 GFM2Q969S9 779 aaKnown RBP14.19□□□□□ -0.14
SF3A1-201ENST00000215793 PCMTD2Q9NV79 361 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 BLOC1S6Q9UL45 172 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 FAM32AQ9Y421 112 aaKnown RBP14.19□□□□□ -0.14
SF3A1-201ENST00000215793 GPR75-ASB3A0A0A6YYF3 556 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 C6orf222P0C671 652 aaPredicted RBP14.19□□□□□ -0.14
SF3A1-201ENST00000215793 KCNA4P22459 653 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 TAF1CQ15572 869 aaPredicted RBP14.19□□□□□ -0.14
SF3A1-201ENST00000215793 ELMO2Q96JJ3 720 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 TRIM10Q9UDY6 481 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 ITM2BQ9Y287 266 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 CDY2AQ9Y6F7 541 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 CDY1Q9Y6F8 540 aa14.19□□□□□ -0.14
SF3A1-201ENST00000215793 TMEM120BA0PK00 339 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 ENO3P13929 434 aaPredicted RBP14.18□□□□□ -0.14
SF3A1-201ENST00000215793 MUTP22033 750 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 LSP1P33241 339 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 NBPF20Q3BBV1 942 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 DAGLBQ8NCG7 672 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 ERP27Q96DN0 273 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 PARK7Q99497 189 aaKnown RBP14.18□□□□□ -0.14
SF3A1-201ENST00000215793 PLAGL2Q9UPG8 496 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 ITGA4P13612 1032 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 CYP11B2P19099 503 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 FNTAP49354 379 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 SYTL3Q4VX76 610 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 MEI1Q5TIA1 1274 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 NAPEPLDQ6IQ20 393 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 GLB1LQ6UWU2 654 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 TRPM8Q7Z2W7 1104 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 EFL1Q7Z2Z2 1120 aaKnown RBP14.18□□□□□ -0.14
SF3A1-201ENST00000215793 KCNH7Q9NS40 1196 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 PHF20L1A8MW92 1017 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 ZNF263O14978 683 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 ARHGEF9O43307 516 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 PNPLA4P41247 253 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 SPDYAQ5MJ70 313 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 ZNF555Q8NEP9 628 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 CYFIP2Q96F07 1278 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 C20orf96Q9NUD7 363 aaPredicted RBP14.18□□□□□ -0.14
SF3A1-201ENST00000215793 CFAP99D6REC4 459 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 RPS6KA5O75582 802 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 STIP1P31948 543 aaKnown RBP14.18□□□□□ -0.14
SF3A1-201ENST00000215793 NEK2P51955 445 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 PPIL6Q8IXY8 311 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 RAET1EQ8TD07 263 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 USP33Q8TEY7 942 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 PPP2R3CQ969Q6 453 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 CCDC134Q9H6E4 229 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 PSD3Q9NYI0 1048 aa14.18□□□□□ -0.14
SF3A1-201ENST00000215793 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.18□□□□□ -0.14
SF3A1-201ENST00000215793 C5orf58C9J3I9 102 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 NTSR2O95665 410 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 AKT1P31749 480 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 CARSP49589 748 aaKnown RBP14.17□□□□□ -0.14
SF3A1-201ENST00000215793 ITGA8P53708 1063 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 PTK6Q13882 451 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 YAF2Q8IY57 180 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 STKLD1Q8NE28 680 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 GPRASP2Q96D09 838 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 SEC16BQ96JE7 1060 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 MTIF3Q9H2K0 278 aaKnown RBP14.17□□□□□ -0.14
SF3A1-201ENST00000215793 GOLPH3Q9H4A6 298 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 BATF3Q9NR55 127 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 MARCOQ9UEW3 520 aaPredicted RBP14.17□□□□□ -0.14
SF3A1-201ENST00000215793 RRN3P2A6NIE6 340 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 SYCP2LQ5T4T6 812 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 TTC39BQ5VTQ0 682 aaPredicted RBP14.17□□□□□ -0.14
SF3A1-201ENST00000215793 IL31Q6EBC2 164 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 EME1Q96AY2 570 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 TMA16Q96EY4 203 aaKnown RBP14.17□□□□□ -0.14
SF3A1-201ENST00000215793 ZNF512Q96ME7 567 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms