RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Nipa1Q8BHK1 323 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Sh2d5Q8JZW5 429 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Vps37bQ8R0J7 285 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pde6cQ91ZQ1 861 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Usp26Q99MX1 835 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Terb2Q9D494 218 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rsc1a1Q9ER99 582 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Cetn2Q9R1K9 172 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gm9774A0A0A6YVU8 407 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Bfsp1A2AMT1 669 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 CflarO35732 481 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 RpsaP14206 295 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Epas1P97481 874 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 GsapQ3TCV3 858 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Wdr18Q4VBE8 431 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 2700097O09RikQ6PGK3 301 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Slc9c1Q6UJY2 1175 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Neto2Q8BNJ6 525 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Slc39a13Q8BZH0 361 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 OlahQ8R197 265 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Kdm4bQ91VY5 1086 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 SarnpQ9D1J3 210 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Eddm13E9Q7F5 164 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Birc5O70201 140 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Zfp42P22227 288 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Myl2P51667 166 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rnf216P58283 853 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tbc1d10aP58802 500 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Drp2Q05AA6 957 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Trim72Q1XH17 477 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Acvrl1Q61288 502 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Srd5a1Q68FF9 255 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Spata24Q6P926 205 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Ankzf1Q80UU1 748 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Trim68Q8K243 485 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Cd248Q91V98 765 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tmem206Q9D771 350 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 HemgnQ9ERZ0 503 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Cables1Q9ESJ1 568 aa10.33□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Card9A2AIV8 536 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 DffaO54786 331 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 PdgfraP26618 1089 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Hcls1P49710 486 aaKnown RBP10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 SftpbP50405 377 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Zfyve27Q3TXX3 415 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Srebf2Q3U1N2 1130 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Spdye4aQ5IBH6 268 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gstt2Q61133 244 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pdzph1Q8BGR1 1238 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 4921504E06RikQ8CET2 560 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pcdha2Q91Y17 948 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 St13Q99L47 371 aaKnown RBP10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Thap12Q9CUX1 758 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rnf14Q9JI90 485 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Dusp8O09112 663 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Stra6O70491 670 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tspyl1O88852 379 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Bcat1P24288 386 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rab20P35295 233 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Hsd17b2P51658 381 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Ccng1P51945 294 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 SbdsP70122 250 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Ppp1r12cQ3UMT1 782 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Cyp2j11Q3UNV2 504 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Zfp953Q3UPV7 304 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pabpn1lQ5XFR0 273 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 B3glctQ8BHT6 489 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Frmd4aQ8BIE6 1020 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tcaf1Q8BNE1 924 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pak4Q8BTW9 593 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Osbpl2Q8BX94 484 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 CenpuQ8C4M7 410 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rell1Q8K2J7 272 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 AticQ9CWJ9 592 aaKnown RBP10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tmem174Q9DCX7 243 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Itgb4A2A863 1818 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Plcg1Q62077 1302 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Lipo2D3YY49 398 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gcnt4E9Q649 455 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 AunipE9Q6Z5 340 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tlk2O55047 718 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Ptp4a2O70274 167 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pias1O88907 651 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 PrkchP23298 683 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pdha1P35486 390 aaKnown RBP10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 HpdP49429 393 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Cdk16Q04735 496 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Nt5dc3Q3UHB1 546 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Shroom1Q5SX79 823 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Sema5bQ60519 1093 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Glra2Q7TNC8 452 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 AmphQ7TQF7 686 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Q80ZQ3 298 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Dupd1Q8BK84 215 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Slc4a7Q8BTY2 1034 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Ddx39aQ8VDW0 427 aaKnown RBP10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 BrdtQ91Y44 956 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tbrg4Q91YM4 630 aaKnown RBP10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Slc39a3Q99K24 317 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Npm3Q9CPP0 175 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms