RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Tbx1P70323 479 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Polr1bP70700 1135 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Slc24a2Q14BI1 711 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tmem120bQ3TA38 339 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rc3h1Q4VGL6 1130 aaKnown RBP9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Fam183bQ5NC57 135 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Lilrb4Q64281 335 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 CtifQ6PEE2 600 aaKnown RBP9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Olfr832Q7TRG9 312 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tcp10aQ80W76 438 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Znf618Q80YY7 953 aaKnown RBP9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Sugp1Q8CH02 643 aaKnown RBP9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Fxr2Q9WVR4 673 aaKnown RBP9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Deaf1Q9Z1T5 566 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Znf521Q6KAS7 1311 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Nid2O88322 1403 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Olfr726E9Q8X3 321 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 BrafP28028 804 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Drg1P32233 367 aaKnown RBP9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Erbb2P70424 1256 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rcn1Q05186 325 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Olfr725Q05A45 321 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Vps72Q62481 368 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rfx4Q7TNK1 735 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Sun2Q8BJS4 731 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 ChiaQ91XA9 473 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Txndc9Q9CQ79 226 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Serpinb9bQ9DAV6 377 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Atp5oQ9DB20 213 aaKnown RBP9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Asah2Q9JHE3 756 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Abcb11Q9QY30 1321 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Kif14L0N7N1 1674 aaKnown RBP9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm7356A0A087WSA6 508 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mindy4b-psA0A1W2P7H6 457 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mucl2P02815 138 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 KitP05532 979 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Scp2P32020 547 aaKnown RBP9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Clec4fP70194 548 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Apoa1Q00623 264 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gsdmc2Q2KHK6 480 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ogfod1Q3U0K8 545 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cd180Q62192 661 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ifit3Q64345 403 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ube2oQ6ZPJ3 1288 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 ZfatQ7TS63 1237 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Sgo2Q7TSY8 1164 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rmnd5aQ80YQ8 391 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rd3Q8BRE0 195 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tmem120aQ8C1E7 343 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Eif3lQ8QZY1 564 aaKnown RBP9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tube1Q9D6T1 475 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Fam205aA2APU8 1308 aa9.56□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Oog1E9Q5G7 496 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Grem2O88273 168 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Pou4f1P17208 421 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cst8P32766 142 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 NfiaQ02780 532 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mageb5Q14AN0 366 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Krt2Q3TTY5 707 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Atg9bQ6EBV9 922 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Inpp5fQ8CDA1 1132 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ulbp1Q8HWA3 334 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mlc1Q8VHK5 382 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Trim33Q99PP7 1142 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 CatsperzQ9CQP8 194 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ifi202Q9R002 445 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Zfp277E9Q6D6 583 aaKnown RBP9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm44G3UW88 330 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Akap1O08715 857 aaKnown RBP9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Stx7O70439 261 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 GemP55041 295 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tdrd5Q5VCS6 1040 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Foxd4Q60688 444 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tssk1bQ61241 365 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ces3aQ63880 571 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ccnt2Q7TQK0 723 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Hat1Q8BY71 416 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ces3bQ8VCU1 571 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 B3galt6Q91Z92 325 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ndufa10Q99LC3 355 aaKnown RBP9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mrpl57Q9CQF8 102 aaKnown RBP9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 OoepQ9CWE6 164 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Dmrtc1Q9D9R7 182 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Extl2Q9ES89 330 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Pus3Q9JI38 481 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Adgrl3Q80TS3 1537 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Lcn6A2AJB9 181 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Abcc3B2RX12 1523 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Lonrf1D3YY23 762 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Hoxc6P10629 235 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Slc2a4P14142 509 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Uhmk1P97343 419 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gabpb1Q00420 383 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Capn13Q3UW68 665 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tfe3Q64092 572 aaKnown RBP9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Glt8d2Q640P4 349 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Thoc5Q8BKT7 683 aaKnown RBP9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Kcnv1Q8BZN2 503 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Zfp263Q8CF60 680 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Alg1Q921Q3 482 aa9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms