RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 DUR1,2P32528 1835 aaKnown RBP-0.86□□□□□ -2.55
snR49snR49 TIM9O74700 87 aa-0.86□□□□□ -2.55
snR49snR49 MSF1P08425 469 aa-0.86□□□□□ -2.55
snR49snR49 MSN4P33749 630 aa-0.86□□□□□ -2.55
snR49snR49 SFK1P35735 353 aa-0.86□□□□□ -2.55
snR49snR49 SHB17P36136 271 aaKnown RBP-0.86□□□□□ -2.55
snR49snR49 ECM4P36156 370 aa-0.86□□□□□ -2.55
snR49snR49 RIB1P38066 345 aa-0.86□□□□□ -2.55
snR49snR49 IRC22P40006 225 aa-0.86□□□□□ -2.55
snR49snR49 GVP36P40531 326 aaKnown RBP-0.86□□□□□ -2.55
snR49snR49 GLR1P41921 483 aaKnown RBP-0.86□□□□□ -2.55
snR49snR49 NUP84P52891 726 aa-0.86□□□□□ -2.55
snR49snR49 MPC3P53311 146 aa-0.86□□□□□ -2.55
snR49snR49 PET191Q02772 108 aa-0.86□□□□□ -2.55
snR49snR49 SWP1Q02795 286 aa-0.86□□□□□ -2.55
snR49snR49 YMR226CQ05016 267 aaKnown RBP-0.86□□□□□ -2.55
snR49snR49 SEI1Q06058 285 aa-0.86□□□□□ -2.55
snR49snR49 TSC3Q3E790 80 aa-0.86□□□□□ -2.55
snR49snR49 KIN28P06242 306 aa-0.87□□□□□ -2.55
snR49snR49 PHO85P17157 305 aa-0.87□□□□□ -2.55
snR49snR49 STE18P18852 110 aa-0.87□□□□□ -2.55
snR49snR49 YPK2P18961 677 aa-0.87□□□□□ -2.55
snR49snR49 PAN3P36102 679 aaPredicted RBP-0.87□□□□□ -2.55
snR49snR49 PAM17P36147 197 aa-0.87□□□□□ -2.55
snR49snR49 YBR285WP38354 144 aa-0.87□□□□□ -2.55
snR49snR49 MVB12P42939 101 aa-0.87□□□□□ -2.55
snR49snR49 UBC12P52491 188 aa-0.87□□□□□ -2.55
snR49snR49 YMD8Q03697 442 aa-0.87□□□□□ -2.55
snR49snR49 FMN1Q03778 218 aa-0.87□□□□□ -2.55
snR49snR49 LPP1Q04396 274 aa-0.87□□□□□ -2.55
snR49snR49 YMR321CQ04898 105 aa-0.87□□□□□ -2.55
snR49snR49 YDR286CQ05530 114 aa-0.87□□□□□ -2.55
snR49snR49 NAT3Q06504 195 aa-0.87□□□□□ -2.55
snR49snR49 MCP1Q12106 302 aa-0.87□□□□□ -2.55
snR49snR49 SSK22P25390 1331 aaPredicted RBP-0.88□□□□□ -2.55
snR49snR49 RPS22AP0C0W1 130 aaKnown RBP-0.88□□□□□ -2.55
snR49snR49 RPL27AP0C2H6 136 aaKnown RBP-0.88□□□□□ -2.55
snR49snR49 MGM101P32787 269 aaKnown RBP-0.88□□□□□ -2.55
snR49snR49 CAF4P36130 643 aa-0.88□□□□□ -2.55
snR49snR49 SKG1P36169 355 aa-0.88□□□□□ -2.55
snR49snR49 MRPL28P36527 147 aa-0.88□□□□□ -2.55
snR49snR49 POP4P38336 279 aa-0.88□□□□□ -2.55
snR49snR49 YHR127WP38833 243 aaKnown RBP-0.88□□□□□ -2.55
snR49snR49 MPM1P40364 252 aa-0.88□□□□□ -2.55
snR49snR49 OTU1P43558 301 aa-0.88□□□□□ -2.55
snR49snR49 ALB1P47019 175 aaPredicted RBP-0.88□□□□□ -2.55
snR49snR49 CCC1P47818 322 aa-0.88□□□□□ -2.55
snR49snR49 YGL230CP53074 147 aa-0.88□□□□□ -2.55
snR49snR49 YNL122CP53921 115 aaPredicted RBP-0.88□□□□□ -2.55
snR49snR49 PRP11Q07350 266 aaPredicted RBP-0.88□□□□□ -2.55
snR49snR49 PGC1Q08959 321 aa-0.88□□□□□ -2.55
snR49snR49 RPS22BQ3E7Y3 130 aaKnown RBP-0.88□□□□□ -2.55
snR49snR49 OM45P16547 393 aa-0.89□□□□□ -2.55
snR49snR49 PPA2P28239 310 aa-0.89□□□□□ -2.55
snR49snR49 SEC17P32602 292 aa-0.89□□□□□ -2.55
snR49snR49 YMR144WP40214 342 aaKnown RBP-0.89□□□□□ -2.55
snR49snR49 USE1P53146 245 aa-0.89□□□□□ -2.55
snR49snR49 ALG13P53178 202 aa-0.89□□□□□ -2.55
snR49snR49 YDR274CP87283 123 aa-0.89□□□□□ -2.55
snR49snR49 LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.89□□□□□ -2.55not detected
snR49snR49 RRN5Q02983 363 aa-0.89□□□□□ -2.55
snR49snR49 YDR209CQ03480 137 aa-0.89□□□□□ -2.55
snR49snR49 FCY1Q12178 158 aa-0.89□□□□□ -2.55
snR49snR49 SPT7P35177 1332 aa-0.89□□□□□ -2.55
snR49snR49 HAP2P06774 265 aa-0.9□□□□□ -2.55
snR49snR49 TRX1P22217 103 aaKnown RBP-0.9□□□□□ -2.55
snR49snR49 MRPL24P36525 258 aaPredicted RBP-0.9□□□□□ -2.55
snR49snR49 BFR1P38934 470 aaKnown RBP RIP-Chip data-0.9□□□□□ -2.55not detected
snR49snR49 AST2P39945 430 aaKnown RBP-0.9□□□□□ -2.55
snR49snR49 APS3P47064 194 aa-0.9□□□□□ -2.55
snR49snR49 YGL235WP53071 178 aa-0.9□□□□□ -2.55
snR49snR49 RTC4P53850 401 aa-0.9□□□□□ -2.55
snR49snR49 AVO2Q04749 426 aa-0.9□□□□□ -2.55
snR49snR49 HRD1Q08109 551 aa-0.9□□□□□ -2.55
snR49snR49 DGA1Q08650 418 aa-0.9□□□□□ -2.55
snR49snR49 BRR2P32639 2163 aaKnown RBP-0.9□□□□□ -2.55
snR49snR49 MRP1P10662 321 aaKnown RBP-0.91□□□□□ -2.56
snR49snR49 TCP1P12612 559 aaKnown RBP-0.91□□□□□ -2.56
snR49snR49 PHO13P19881 312 aa-0.91□□□□□ -2.56
snR49snR49 ATP15P21306 62 aa-0.91□□□□□ -2.56
snR49snR49 ARO7P32178 256 aa-0.91□□□□□ -2.56
snR49snR49 RPA12P32529 125 aaKnown RBP-0.91□□□□□ -2.56
snR49snR49 YBL010CP32788 280 aa-0.91□□□□□ -2.56
snR49snR49 UTP30P36144 274 aaKnown RBP-0.91□□□□□ -2.56
snR49snR49 GAT4P40569 121 aa-0.91□□□□□ -2.56
snR49snR49 CUP9P41817 306 aa-0.91□□□□□ -2.56
snR49snR49 NSA1P53136 463 aaPredicted RBP-0.91□□□□□ -2.56
snR49snR49 YNL190WP53872 204 aa-0.91□□□□□ -2.56
snR49snR49 DID2P69771 204 aa-0.91□□□□□ -2.56
snR49snR49 ARO80Q04052 950 aa-0.91□□□□□ -2.56
snR49snR49 RRT8Q08219 342 aa-0.91□□□□□ -2.56
snR49snR49 IRC23Q08416 157 aa-0.91□□□□□ -2.56
snR49snR49 YOR072WQ08486 104 aa-0.91□□□□□ -2.56
snR49snR49 GET4Q12125 312 aa-0.91□□□□□ -2.56
snR49snR49 YLR126CQ12288 251 aa-0.91□□□□□ -2.56
snR49snR49 HUG1Q6Q5K6 68 aa-0.91□□□□□ -2.56
snR49snR49 RIB3Q99258 208 aa-0.91□□□□□ -2.56
snR49snR49 POR1P04840 283 aaKnown RBP-0.92□□□□□ -2.56
snR49snR49 STF2P16965 84 aa-0.92□□□□□ -2.56
snR49snR49 ATG8P38182 117 aaRIP-Chip data-0.92□□□□□ -2.56not detected
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms