RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C YER034WP40022 185 aaKnown RBP2□□□□□ -2.09
RPC40YPR110C FIS1P40515 155 aa2□□□□□ -2.09
RPC40YPR110C NUP57P48837 541 aa2□□□□□ -2.09
RPC40YPR110C ERV29P53337 310 aa2□□□□□ -2.09
RPC40YPR110C RTC4P53850 401 aa2□□□□□ -2.09
RPC40YPR110C IGO1P53897 168 aa2□□□□□ -2.09
RPC40YPR110C SLM2P53955 656 aa2□□□□□ -2.09
RPC40YPR110C CGI121Q03705 181 aaKnown RBP2□□□□□ -2.09
RPC40YPR110C YML096WQ04489 525 aa2□□□□□ -2.09
RPC40YPR110C LSO2Q3E772 92 aaKnown RBP2□□□□□ -2.09
RPC40YPR110C DDP1Q99321 188 aaKnown RBP2□□□□□ -2.09
RPC40YPR110C RIF1P29539 1916 aa1.99□□□□□ -2.09
RPC40YPR110C RPL22AP05749 121 aaKnown RBP1.99□□□□□ -2.09
RPC40YPR110C MGM101P32787 269 aaKnown RBP1.99□□□□□ -2.09
RPC40YPR110C PRP18P33411 251 aaPredicted RBP1.99□□□□□ -2.09
RPC40YPR110C ECM33P38248 429 aaKnown RBP1.99□□□□□ -2.09
RPC40YPR110C SIP3P38717 1229 aa1.99□□□□□ -2.09
RPC40YPR110C DOG1P38774 246 aa1.99□□□□□ -2.09
RPC40YPR110C DSK2P48510 373 aa1.99□□□□□ -2.09
RPC40YPR110C ALG13P53178 202 aa1.99□□□□□ -2.09
RPC40YPR110C BNA7Q04066 261 aa1.99□□□□□ -2.09
RPC40YPR110C SSQ1Q05931 657 aaPredicted RBP1.99□□□□□ -2.09
RPC40YPR110C CDD1Q06549 142 aa1.99□□□□□ -2.09
RPC40YPR110C AKR2Q12013 749 aa1.99□□□□□ -2.09
RPC40YPR110C EMC6Q12431 108 aa1.99□□□□□ -2.09
RPC40YPR110C RME1P32338 300 aaKnown RBP1.98□□□□□ -2.09
RPC40YPR110C CBT1P36038 271 aaPredicted RBP1.98□□□□□ -2.09
RPC40YPR110C YBR063CP38083 404 aa1.98□□□□□ -2.09
RPC40YPR110C YNL194CP40169 301 aa1.98□□□□□ -2.09
RPC40YPR110C FAR7P43592 221 aa1.98□□□□□ -2.09
RPC40YPR110C IRC18P47056 224 aa1.98□□□□□ -2.09
RPC40YPR110C SNX4P47057 423 aa1.98□□□□□ -2.09
RPC40YPR110C GIM3P53900 129 aa1.98□□□□□ -2.09
RPC40YPR110C YNL010WP53981 241 aaKnown RBP1.98□□□□□ -2.09
RPC40YPR110C MRPS17Q03246 237 aaPredicted RBP1.98□□□□□ -2.09
RPC40YPR110C HEM25Q07534 307 aa1.98□□□□□ -2.09
RPC40YPR110C YOR283WQ12040 230 aaKnown RBP1.98□□□□□ -2.09
RPC40YPR110C YDR157WA0A023PZE8 133 aa1.97□□□□□ -2.09
RPC40YPR110C CDC28P00546 298 aaKnown RBP1.97□□□□□ -2.09
RPC40YPR110C RPL28P02406 149 aaKnown RBP1.97□□□□□ -2.09
RPC40YPR110C YHR032W-AP0C5N6 59 aa1.97□□□□□ -2.09
RPC40YPR110C FCY2P17064 533 aa1.97□□□□□ -2.09
RPC40YPR110C GRX2P17695 143 aaKnown RBP1.97□□□□□ -2.09
RPC40YPR110C YOR062CP36025 268 aa1.97□□□□□ -2.09
RPC40YPR110C YAR068WP39564 161 aa1.97□□□□□ -2.09
RPC40YPR110C IRC22P40006 225 aa1.97□□□□□ -2.09
RPC40YPR110C MNN5P46982 586 aa1.97□□□□□ -2.09
RPC40YPR110C CWC23P52868 283 aaPredicted RBP1.97□□□□□ -2.09
RPC40YPR110C CGR1P53188 120 aa1.97□□□□□ -2.09
RPC40YPR110C YMR321CQ04898 105 aa1.97□□□□□ -2.09
RPC40YPR110C FUS2Q05670 677 aa1.97□□□□□ -2.09
RPC40YPR110C ATG39Q06159 398 aa1.97□□□□□ -2.09
RPC40YPR110C JLP1Q12358 412 aa1.97□□□□□ -2.09
RPC40YPR110C RPL9AP05738 191 aaKnown RBP1.96□□□□□ -2.1
RPC40YPR110C SNF6P18888 332 aa1.96□□□□□ -2.1
RPC40YPR110C APA2P22108 325 aa1.96□□□□□ -2.1
RPC40YPR110C TVP38P36164 337 aa1.96□□□□□ -2.1
RPC40YPR110C GRE3P38715 327 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
RPC40YPR110C DOG2P38773 246 aa1.96□□□□□ -2.1
RPC40YPR110C HMF1P40037 129 aaKnown RBP1.96□□□□□ -2.1
RPC40YPR110C ADO1P47143 340 aaKnown RBP1.96□□□□□ -2.1
RPC40YPR110C BXI1P48558 297 aa1.96□□□□□ -2.1
RPC40YPR110C RPL9BP51401 191 aaKnown RBP1.96□□□□□ -2.1
RPC40YPR110C RGM1Q00453 211 aa1.96□□□□□ -2.1
RPC40YPR110C SNZ1Q03148 297 aa1.96□□□□□ -2.1
RPC40YPR110C PSF1Q12488 208 aa1.96□□□□□ -2.1
RPC40YPR110C LAA1P39526 2014 aa1.96□□□□□ -2.1
RPC40YPR110C PUT1P09368 476 aa1.95□□□□□ -2.1
RPC40YPR110C PHO13P19881 312 aa1.95□□□□□ -2.1
RPC40YPR110C DBF2P22204 572 aa1.95□□□□□ -2.1
RPC40YPR110C TCA17P32613 152 aa1.95□□□□□ -2.1
RPC40YPR110C ARC19P33204 171 aaKnown RBP1.95□□□□□ -2.1
RPC40YPR110C TAF14P35189 244 aa1.95□□□□□ -2.1
RPC40YPR110C YET1P35723 206 aa1.95□□□□□ -2.1
RPC40YPR110C PRM8P53174 237 aa1.95□□□□□ -2.1
RPC40YPR110C PDR17P53844 350 aa1.95□□□□□ -2.1
RPC40YPR110C DAD3P69850 94 aa1.95□□□□□ -2.1
RPC40YPR110C YMD8Q03697 442 aa1.95□□□□□ -2.1
RPC40YPR110C YDR248CQ03786 193 aa1.95□□□□□ -2.1
RPC40YPR110C YMR226CQ05016 267 aaKnown RBP1.95□□□□□ -2.1
RPC40YPR110C ARR2Q06597 130 aa1.95□□□□□ -2.1
RPC40YPR110C MHT1Q12525 324 aa1.95□□□□□ -2.1
RPC40YPR110C OAC1P32332 324 aa1.94□□□□□ -2.1
RPC40YPR110C VMA11P32842 164 aa1.94□□□□□ -2.1
RPC40YPR110C IKI1P38874 309 aa1.94□□□□□ -2.1
RPC40YPR110C CUS2P53830 285 aaPredicted RBP1.94□□□□□ -2.1
RPC40YPR110C TIM8P57744 87 aa1.94□□□□□ -2.1
RPC40YPR110C PRM15Q03262 622 aa1.94□□□□□ -2.1
RPC40YPR110C UBR2Q07963 1872 aa1.94□□□□□ -2.1
RPC40YPR110C CDC8P00572 216 aa1.93□□□□□ -2.1
RPC40YPR110C REP2P03872 296 aa1.93□□□□□ -2.1
RPC40YPR110C MSW1P04803 379 aa1.93□□□□□ -2.1
RPC40YPR110C SEC4P07560 215 aaKnown RBP1.93□□□□□ -2.1
RPC40YPR110C GCN3P14741 305 aa1.93□□□□□ -2.1
RPC40YPR110C YPK2P18961 677 aa1.93□□□□□ -2.1
RPC40YPR110C APS1P35181 156 aa1.93□□□□□ -2.1
RPC40YPR110C RFC4P40339 323 aaKnown RBP1.93□□□□□ -2.1
RPC40YPR110C YRB2P40517 327 aa1.93□□□□□ -2.1
RPC40YPR110C LPP1Q04396 274 aa1.93□□□□□ -2.1
RPC40YPR110C NEJ1Q06148 342 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms