RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	YFR032C-B	Q8TGU2	87 aa		0.73	□□□□□ -2.29
YPR039W	YPR039W	SEY1	Q99287	776 aa		0.73	□□□□□ -2.29
YPR039W	YPR039W	YER188C-A	P0C0V2	99 aa		0.72	□□□□□ -2.29
YPR039W	YPR039W	RPL27A	P0C2H6	136 aa	Known RBP	0.72	□□□□□ -2.29
YPR039W	YPR039W	YBR121C-A	P0C5L4	52 aa		0.72	□□□□□ -2.29
YPR039W	YPR039W	ATP15	P21306	62 aa		0.72	□□□□□ -2.29
YPR039W	YPR039W	RTC3	P38804	111 aa	Predicted RBP	0.72	□□□□□ -2.29
YPR039W	YPR039W	HUA1	P40325	198 aa		0.72	□□□□□ -2.29
YPR039W	YPR039W	JLP1	Q12358	412 aa		0.72	□□□□□ -2.29
YPR039W	YPR039W	PRX1	P34227	261 aa	Known RBP	0.71	□□□□□ -2.3
YPR039W	YPR039W	YHL042W	P38729	150 aa		0.71	□□□□□ -2.3
YPR039W	YPR039W	YER034W	P40022	185 aa	Known RBP	0.71	□□□□□ -2.3
YPR039W	YPR039W	YFL065C	P43539	102 aa		0.71	□□□□□ -2.3
YPR039W	YPR039W	ADO1	P47143	340 aa	Known RBP	0.71	□□□□□ -2.3
YPR039W	YPR039W	RPL37B	P51402	88 aa	Known RBP	0.71	□□□□□ -2.3
YPR039W	YPR039W	MGA1	P53050	456 aa		0.71	□□□□□ -2.3
YPR039W	YPR039W	PDR17	P53844	350 aa		0.71	□□□□□ -2.3
YPR039W	YPR039W	YNL247W	P53852	767 aa	Known RBP	0.71	□□□□□ -2.3
YPR039W	YPR039W	CWC27	Q02770	301 aa		0.71	□□□□□ -2.3
YPR039W	YPR039W	PET191	Q02772	108 aa		0.71	□□□□□ -2.3
YPR039W	YPR039W	YKL183C-A	Q3E765	70 aa		0.71	□□□□□ -2.3
YPR039W	YPR039W	RPL25	P04456	142 aa	Known RBP	0.7	□□□□□ -2.3
YPR039W	YPR039W	YHR212W-A	P0CX91	67 aa		0.7	□□□□□ -2.3
YPR039W	YPR039W	CKS1	P20486	150 aa	Known RBP	0.7	□□□□□ -2.3
YPR039W	YPR039W	MGM101	P32787	269 aa	Known RBP	0.7	□□□□□ -2.3
YPR039W	YPR039W	ERG28	P40030	148 aa		0.7	□□□□□ -2.3
YPR039W	YPR039W	YRB1	P41920	201 aa	Known RBP	0.7	□□□□□ -2.3
YPR039W	YPR039W	IRC18	P47056	224 aa		0.7	□□□□□ -2.3
YPR039W	YPR039W	COG5	P53951	403 aa		0.7	□□□□□ -2.3
YPR039W	YPR039W	YIL177C	P40434	1758 aa		0.7	□□□□□ -2.3
YPR039W	YPR039W	YJL225C	P40889	1758 aa		0.7	□□□□□ -2.3
YPR039W	YPR039W	MDM35	O60200	86 aa		0.69	□□□□□ -2.3
YPR039W	YPR039W	NHP6B	P11633	99 aa	Known RBP	0.69	□□□□□ -2.3
YPR039W	YPR039W	MAG1	P22134	296 aa	Known RBP	0.69	□□□□□ -2.3
YPR039W	YPR039W	BMH2	P34730	273 aa	Known RBP	0.69	□□□□□ -2.3
YPR039W	YPR039W	TVP23	P38962	199 aa		0.69	□□□□□ -2.3
YPR039W	YPR039W	RTR1	P40084	226 aa	Predicted RBP	0.69	□□□□□ -2.3
YPR039W	YPR039W	YPL073C	P40323	161 aa		0.69	□□□□□ -2.3
YPR039W	YPR039W	HYR1	P40581	163 aa	Known RBP	0.69	□□□□□ -2.3
YPR039W	YPR039W	OTU1	P43558	301 aa		0.69	□□□□□ -2.3
YPR039W	YPR039W	LSM7	P53905	115 aa	Known RBP	0.69	□□□□□ -2.3
YPR039W	YPR039W	YOL160W	Q08321	113 aa		0.69	□□□□□ -2.3
YPR039W	YPR039W	YNG1	Q08465	219 aa		0.69	□□□□□ -2.3
YPR039W	YPR039W	SPO13	P23624	291 aa		0.68	□□□□□ -2.3
YPR039W	YPR039W	YNL194C	P40169	301 aa		0.68	□□□□□ -2.3
YPR039W	YPR039W	MPC3	P53311	146 aa		0.68	□□□□□ -2.3
YPR039W	YPR039W	HNT1	Q04344	158 aa	Known RBP	0.68	□□□□□ -2.3
YPR039W	YPR039W	YPR174C	Q06616	221 aa	Predicted RBP	0.68	□□□□□ -2.3
YPR039W	YPR039W	DGA1	Q08650	418 aa		0.68	□□□□□ -2.3
YPR039W	YPR039W	IKI3	Q06706	1349 aa	Known RBP	0.67	□□□□□ -2.3
YPR039W	YPR039W	STE18	P18852	110 aa		0.67	□□□□□ -2.3
YPR039W	YPR039W	CBT1	P36038	271 aa	Predicted RBP	0.67	□□□□□ -2.3
YPR039W	YPR039W	ECM4	P36156	370 aa		0.67	□□□□□ -2.3
YPR039W	YPR039W	TRM5	P38793	499 aa		0.67	□□□□□ -2.3
YPR039W	YPR039W	YFH7	P43591	353 aa		0.67	□□□□□ -2.3
YPR039W	YPR039W	RAD17	P48581	401 aa		0.67	□□□□□ -2.3
YPR039W	YPR039W	YRA1	Q12159	226 aa	Known RBP	0.67	□□□□□ -2.3
YPR039W	YPR039W	MDM32	Q12171	622 aa		0.67	□□□□□ -2.3
YPR039W	YPR039W	NCB2	Q92317	146 aa		0.67	□□□□□ -2.3
YPR039W	YPR039W	ODC2	Q99297	307 aa		0.67	□□□□□ -2.3
YPR039W	YPR039W	YDR157W	A0A023PZE8	133 aa		0.66	□□□□□ -2.3
YPR039W	YPR039W	POR1	P04840	283 aa	Known RBP	0.66	□□□□□ -2.3
YPR039W	YPR039W	MER1	P16523	270 aa		0.66	□□□□□ -2.3
YPR039W	YPR039W	PRP18	P33411	251 aa	Predicted RBP	0.66	□□□□□ -2.3
YPR039W	YPR039W	HMF1	P40037	129 aa	Known RBP	0.66	□□□□□ -2.3
YPR039W	YPR039W	AIM36	Q03798	255 aa		0.66	□□□□□ -2.3
YPR039W	YPR039W	YMR252C	Q04814	134 aa		0.66	□□□□□ -2.3
YPR039W	YPR039W	COQ1	P18900	473 aa		0.65	□□□□□ -2.31
YPR039W	YPR039W	OCH1	P31755	480 aa		0.65	□□□□□ -2.31
YPR039W	YPR039W	SPS18	P32572	300 aa		0.65	□□□□□ -2.31
YPR039W	YPR039W	PAN3	P36102	679 aa	Predicted RBP	0.65	□□□□□ -2.31
YPR039W	YPR039W	CWC23	P52868	283 aa	Predicted RBP	0.65	□□□□□ -2.31
YPR039W	YPR039W	GET1	P53192	235 aa		0.65	□□□□□ -2.31
YPR039W	YPR039W	CDC33	P07260	213 aa	Known RBP	0.64	□□□□□ -2.31
YPR039W	YPR039W	YCR090C	P25654	182 aa	Known RBP	0.64	□□□□□ -2.31
YPR039W	YPR039W	ERG10	P41338	398 aa	Known RBP	0.64	□□□□□ -2.31
YPR039W	YPR039W	YCL042W	P25572	119 aa		0.63	□□□□□ -2.31
YPR039W	YPR039W	YCR087C-A	P37263	153 aa		0.63	□□□□□ -2.31
YPR039W	YPR039W	YHL018W	P38744	120 aa	Predicted RBP	0.63	□□□□□ -2.31
YPR039W	YPR039W	HPA3	P39979	161 aa		0.63	□□□□□ -2.31
YPR039W	YPR039W	YEL008W	P40001	126 aa		0.63	□□□□□ -2.31
YPR039W	YPR039W	MSS2	P40990	351 aa		0.63	□□□□□ -2.31
YPR039W	YPR039W	AIM25	P47140	327 aa		0.63	□□□□□ -2.31
YPR039W	YPR039W	DAD4	P69851	72 aa		0.63	□□□□□ -2.31
YPR039W	YPR039W	CDC36	P06100	191 aa	Predicted RBP	0.62	□□□□□ -2.31
YPR039W	YPR039W	IKI1	P38874	309 aa		0.62	□□□□□ -2.31
YPR039W	YPR039W	YEA4	P40004	342 aa		0.62	□□□□□ -2.31
YPR039W	YPR039W	DYN3	Q04949	312 aa		0.62	□□□□□ -2.31
YPR039W	YPR039W	GGA1	Q06336	557 aa		0.62	□□□□□ -2.31
YPR039W	YPR039W	PRP11	Q07350	266 aa	Predicted RBP	0.62	□□□□□ -2.31
YPR039W	YPR039W	IRC23	Q08416	157 aa		0.62	□□□□□ -2.31
YPR039W	YPR039W	COX8	P04039	78 aa		0.61	□□□□□ -2.31
YPR039W	YPR039W	RPB7	P34087	171 aa		0.61	□□□□□ -2.31
YPR039W	YPR039W	AIM2	P39721	246 aa		0.61	□□□□□ -2.31
YPR039W	YPR039W	UBC12	P52491	188 aa		0.61	□□□□□ -2.31
YPR039W	YPR039W	YMR295C	Q03559	197 aa		0.61	□□□□□ -2.31
YPR039W	YPR039W	LCL2	Q08045	131 aa		0.61	□□□□□ -2.31
YPR039W	YPR039W	FIT2	Q08906	153 aa		0.61	□□□□□ -2.31
YPR039W	YPR039W	SLH1	P53327	1967 aa	Known RBP	0.61	□□□□□ -2.31
YPR039W	YPR039W	YAR023C	D6VPM8	179 aa		0.6	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 186.8 ms