RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C SPS18P32572 300 aa5.78□□□□□ -1.48
UME1YPL139C MRPL27P36526 146 aaPredicted RBP5.78□□□□□ -1.48
UME1YPL139C CRH1P53301 507 aa5.78□□□□□ -1.48
UME1YPL139C MCH1Q07376 486 aa5.78□□□□□ -1.48
UME1YPL139C YOR292CQ08743 309 aa5.78□□□□□ -1.48
UME1YPL139C YOS1Q3E834 85 aa5.78□□□□□ -1.48
UME1YPL139C RAD52P06778 471 aaKnown RBP5.77□□□□□ -1.49
UME1YPL139C TOM40P23644 387 aaKnown RBP5.77□□□□□ -1.49
UME1YPL139C ERG2P32352 222 aa5.77□□□□□ -1.49
UME1YPL139C TCA17P32613 152 aa5.77□□□□□ -1.49
UME1YPL139C PRY2P36110 329 aa5.77□□□□□ -1.49
UME1YPL139C YKR045CP36138 183 aa5.77□□□□□ -1.49
UME1YPL139C DAD2P36162 133 aa5.77□□□□□ -1.49
UME1YPL139C IKI1P38874 309 aa5.77□□□□□ -1.49
UME1YPL139C PRM5P40476 318 aa5.77□□□□□ -1.49
UME1YPL139C IRC18P47056 224 aa5.77□□□□□ -1.49
UME1YPL139C SRL4Q03085 281 aa5.77□□□□□ -1.49
UME1YPL139C YML122CQ03207 126 aa5.77□□□□□ -1.49
UME1YPL139C NGL2Q03264 515 aaKnown RBP5.77□□□□□ -1.49
UME1YPL139C TY1A-DR2Q03964 440 aaKnown RBP5.77□□□□□ -1.49
UME1YPL139C SYM1Q06563 197 aa5.77□□□□□ -1.49
UME1YPL139C DGK1Q12382 290 aa5.77□□□□□ -1.49
UME1YPL139C HUG1Q6Q5K6 68 aa5.77□□□□□ -1.49
UME1YPL139C ARG80P07249 177 aa5.76□□□□□ -1.49
UME1YPL139C CDC23P16522 626 aa5.76□□□□□ -1.49
UME1YPL139C FUS3P16892 353 aaKnown RBP5.76□□□□□ -1.49
UME1YPL139C YCP4P25349 247 aaKnown RBP5.76□□□□□ -1.49
UME1YPL139C YCR061WP25639 631 aa5.76□□□□□ -1.49
UME1YPL139C MSS1P32559 526 aaPredicted RBP5.76□□□□□ -1.49
UME1YPL139C UTP30P36144 274 aaKnown RBP5.76□□□□□ -1.49
UME1YPL139C YJL213WP40896 331 aa5.76□□□□□ -1.49
UME1YPL139C SER2P42941 309 aa5.76□□□□□ -1.49
UME1YPL139C YML018CQ03730 393 aa5.76□□□□□ -1.49
UME1YPL139C YPD1Q07688 167 aa5.76□□□□□ -1.49
UME1YPL139C SOG2Q08817 791 aa5.76□□□□□ -1.49
UME1YPL139C JID1Q12350 301 aa5.76□□□□□ -1.49
UME1YPL139C MRS4P23500 304 aa5.75□□□□□ -1.49
UME1YPL139C MRP20P32387 263 aa5.75□□□□□ -1.49
UME1YPL139C IPI1P38803 334 aaPredicted RBP5.75□□□□□ -1.49
UME1YPL139C MSE1P48525 536 aa5.75□□□□□ -1.49
UME1YPL139C ALG9P53868 555 aaKnown RBP5.75□□□□□ -1.49
UME1YPL139C VPS71Q03433 280 aa5.75□□□□□ -1.49
UME1YPL139C YGR035W-AQ45U48 73 aa5.75□□□□□ -1.49
UME1YPL139C UBA3Q99344 299 aa5.75□□□□□ -1.49
UME1YPL139C RPN13O13563 156 aa5.74□□□□□ -1.49
UME1YPL139C CYC1P00044 109 aaPredicted RBP5.74□□□□□ -1.49
UME1YPL139C MIR1P23641 311 aaKnown RBP5.74□□□□□ -1.49
UME1YPL139C ROX3P25046 220 aa5.74□□□□□ -1.49
UME1YPL139C INO2P26798 304 aa5.74□□□□□ -1.49
UME1YPL139C TRR1P29509 319 aaKnown RBP5.74□□□□□ -1.49
UME1YPL139C SPT14P32363 452 aa5.74□□□□□ -1.49
UME1YPL139C COQ2P32378 372 aa5.74□□□□□ -1.49
UME1YPL139C PUS4P48567 403 aaKnown RBP5.74□□□□□ -1.49
UME1YPL139C MED4Q12343 284 aa5.74□□□□□ -1.49
UME1YPL139C BOL1Q3E793 110 aa5.74□□□□□ -1.49
UME1YPL139C PET20Q99373 253 aa5.74□□□□□ -1.49
UME1YPL139C FLO10P36170 1169 aa5.73□□□□□ -1.49
UME1YPL139C POP8P38208 133 aa5.73□□□□□ -1.49
UME1YPL139C MRPS17Q03246 237 aaPredicted RBP5.73□□□□□ -1.49
UME1YPL139C MSC3Q05812 728 aa5.73□□□□□ -1.49
UME1YPL139C RGC1Q06108 1083 aaKnown RBP5.73□□□□□ -1.49
UME1YPL139C YOR385WQ08909 290 aa5.73□□□□□ -1.49
UME1YPL139C PHO85P17157 305 aa5.72□□□□□ -1.49
UME1YPL139C LSB5P25369 354 aa5.72□□□□□ -1.49
UME1YPL139C UTP11P34247 250 aaPredicted RBP5.72□□□□□ -1.49
UME1YPL139C FCY21P40039 528 aa5.72□□□□□ -1.49
UME1YPL139C RPA43P46669 326 aa5.72□□□□□ -1.49
UME1YPL139C UBP8P50102 471 aa5.72□□□□□ -1.49
UME1YPL139C LPP1Q04396 274 aa5.72□□□□□ -1.49
UME1YPL139C SPG4Q04438 115 aa5.72□□□□□ -1.49
UME1YPL139C YBR126W-AQ8TGU7 68 aa5.72□□□□□ -1.49
UME1YPL139C RPL9AP05738 191 aaKnown RBP5.71□□□□□ -1.5
UME1YPL139C PET54P10834 293 aa5.71□□□□□ -1.5
UME1YPL139C ERV1P27882 189 aa5.71□□□□□ -1.5
UME1YPL139C ECM31P38122 312 aa5.71□□□□□ -1.5
UME1YPL139C RPL9BP51401 191 aaKnown RBP5.71□□□□□ -1.5
UME1YPL139C RSM27P53305 110 aa5.71□□□□□ -1.5
UME1YPL139C THI74Q04083 370 aa5.71□□□□□ -1.5
UME1YPL139C VBA1Q04301 562 aa5.71□□□□□ -1.5
UME1YPL139C YDL086WQ07505 273 aa5.71□□□□□ -1.5
UME1YPL139C YFH1Q07540 174 aa5.71□□□□□ -1.5
UME1YPL139C FEX2Q08991 375 aa5.71□□□□□ -1.5
UME1YPL139C ENV7Q12003 364 aa5.71□□□□□ -1.5
UME1YPL139C CPR4P25334 318 aa5.7□□□□□ -1.5
UME1YPL139C PAN3P36102 679 aaPredicted RBP5.7□□□□□ -1.5
UME1YPL139C BMT5P40493 336 aa5.7□□□□□ -1.5
UME1YPL139C RPA34P47006 233 aaPredicted RBP5.7□□□□□ -1.5
UME1YPL139C YIP1P53039 248 aa5.7□□□□□ -1.5
UME1YPL139C TPN1P53099 579 aa5.7□□□□□ -1.5
UME1YPL139C LSM7P53905 115 aaKnown RBP5.7□□□□□ -1.5
UME1YPL139C IRC23Q08416 157 aa5.7□□□□□ -1.5
UME1YPL139C MRPL23Q12487 163 aaPredicted RBP5.7□□□□□ -1.5
UME1YPL139C HTZ1Q12692 134 aaKnown RBP5.7□□□□□ -1.5
UME1YPL139C YBR255C-AQ3E776 120 aa5.7□□□□□ -1.5
UME1YPL139C PET494P07390 489 aaPredicted RBP5.69□□□□□ -1.5
UME1YPL139C TAL1P15019 335 aaKnown RBP5.69□□□□□ -1.5
UME1YPL139C STF2P16965 84 aa5.69□□□□□ -1.5
UME1YPL139C YMR31P19955 123 aa5.69□□□□□ -1.5
UME1YPL139C YFL054CP43549 646 aa5.69□□□□□ -1.5
UME1YPL139C VPS55P47111 140 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms