RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W ERV1P27882 189 aa1.94□□□□□ -2.1
SEC16YPL085W UTR2P32623 467 aa1.94□□□□□ -2.1
SEC16YPL085W FIG1P38224 298 aa1.94□□□□□ -2.1
SEC16YPL085W GTT1P40582 234 aa1.94□□□□□ -2.1
SEC16YPL085W YJL213WP40896 331 aa1.94□□□□□ -2.1
SEC16YPL085W DAN1P47178 298 aa1.94□□□□□ -2.1
SEC16YPL085W MSY1P48527 492 aa1.94□□□□□ -2.1
SEC16YPL085W ERV29P53337 310 aa1.94□□□□□ -2.1
SEC16YPL085W YNR040WP53736 256 aa1.94□□□□□ -2.1
SEC16YPL085W DAD3P69850 94 aa1.94□□□□□ -2.1
SEC16YPL085W RDL2Q08742 149 aaKnown RBP1.94□□□□□ -2.1
SEC16YPL085W CSM4Q08955 156 aa1.94□□□□□ -2.1
SEC16YPL085W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SEC16YPL085W PAA1Q12447 191 aaKnown RBP1.94□□□□□ -2.1
SEC16YPL085W YLR099W-AQ3E798 87 aa1.94□□□□□ -2.1
SEC16YPL085W IDH2P28241 369 aaKnown RBP1.94□□□□□ -2.1
SEC16YPL085W PAD1P33751 242 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SEC16YPL085W PTC7P38797 343 aa1.94□□□□□ -2.1
SEC16YPL085W FMP52P40008 231 aa1.94□□□□□ -2.1
SEC16YPL085W SGN1P40561 250 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SEC16YPL085W SNO1Q03144 224 aa1.94□□□□□ -2.1
SEC16YPL085W TDA6Q06466 467 aa1.94□□□□□ -2.1
SEC16YPL085W YLR042CQ07990 161 aa1.94□□□□□ -2.1
SEC16YPL085W DFR1P07807 211 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SEC16YPL085W SAR1P20606 190 aaKnown RBP1.94□□□□□ -2.1
SEC16YPL085W RRT1P38192 103 aa1.94□□□□□ -2.1
SEC16YPL085W GZF3P42944 551 aaKnown RBP1.94□□□□□ -2.1
SEC16YPL085W NSE4P43124 402 aa1.94□□□□□ -2.1
SEC16YPL085W OTU1P43558 301 aa1.94□□□□□ -2.1
SEC16YPL085W PLP1Q04004 230 aa1.94□□□□□ -2.1
SEC16YPL085W YDR215CQ12240 137 aa1.94□□□□□ -2.1
SEC16YPL085W YLR111WQ12528 110 aa1.94□□□□□ -2.1
SEC16YPL085W YHR214C-EQ8TGK0 99 aa1.94□□□□□ -2.1
SEC16YPL085W RPL42AP0CX27 106 aaKnown RBP1.94□□□□□ -2.1
SEC16YPL085W RPL42BP0CX28 106 aaKnown RBP1.94□□□□□ -2.1
SEC16YPL085W FMT1P32785 401 aa1.94□□□□□ -2.1
SEC16YPL085W YKL102CP34249 101 aa1.94□□□□□ -2.1
SEC16YPL085W PAU7P39545 55 aa1.94□□□□□ -2.1
SEC16YPL085W YEL057CP39983 233 aa1.94□□□□□ -2.1
SEC16YPL085W VRG4P40107 337 aa1.94□□□□□ -2.1
SEC16YPL085W CFD1P40558 293 aa1.94□□□□□ -2.1
SEC16YPL085W PAU5P43575 122 aa1.94□□□□□ -2.1
SEC16YPL085W PMT3P47190 753 aa1.94□□□□□ -2.1
SEC16YPL085W JAC1P53193 184 aa1.94□□□□□ -2.1
SEC16YPL085W NCE103P53615 221 aa1.94□□□□□ -2.1
SEC16YPL085W ATP23P53722 227 aa1.94□□□□□ -2.1
SEC16YPL085W ATG39Q06159 398 aa1.94□□□□□ -2.1
SEC16YPL085W KEI1Q06346 221 aa1.94□□□□□ -2.1
SEC16YPL085W ENV7Q12003 364 aa1.94□□□□□ -2.1
SEC16YPL085W YPR108W-AQ3E7B3 70 aa1.94□□□□□ -2.1
SEC16YPL085W ATP5P09457 212 aa1.94□□□□□ -2.1
SEC16YPL085W MRP2P10663 115 aaPredicted RBP1.94□□□□□ -2.1
SEC16YPL085W FRM2P37261 193 aa1.94□□□□□ -2.1
SEC16YPL085W ATX1P38636 73 aa1.94□□□□□ -2.1
SEC16YPL085W VMA7P39111 118 aa1.94□□□□□ -2.1
SEC16YPL085W HPA3P39979 161 aa1.94□□□□□ -2.1
SEC16YPL085W GLE2P40066 365 aa1.94□□□□□ -2.1
SEC16YPL085W PAU15P40585 124 aa1.94□□□□□ -2.1
SEC16YPL085W YJL218WP40892 196 aaKnown RBP1.94□□□□□ -2.1
SEC16YPL085W PPT2Q12036 173 aa1.94□□□□□ -2.1
SEC16YPL085W YPR117WQ06116 2489 aa1.93□□□□□ -2.1
SEC16YPL085W EMP70P32802 667 aa1.93□□□□□ -2.1
SEC16YPL085W YKL162CP36052 402 aa1.93□□□□□ -2.1
SEC16YPL085W YNR071CP53757 342 aa1.93□□□□□ -2.1
SEC16YPL085W PDR17P53844 350 aa1.93□□□□□ -2.1
SEC16YPL085W ASM4Q05166 528 aa1.93□□□□□ -2.1
SEC16YPL085W YPR109WQ06104 294 aa1.93□□□□□ -2.1
SEC16YPL085W DXO1Q06349 442 aa1.93□□□□□ -2.1
SEC16YPL085W ATG10Q07879 167 aa1.93□□□□□ -2.1
SEC16YPL085W TFC7Q12415 435 aa1.93□□□□□ -2.1
SEC16YPL085W TOA2P32774 122 aa1.93□□□□□ -2.1
SEC16YPL085W MID1P41821 548 aa1.93□□□□□ -2.1
SEC16YPL085W BXI1P48558 297 aa1.93□□□□□ -2.1
SEC16YPL085W ATC1Q04005 294 aa1.93□□□□□ -2.1
SEC16YPL085W MHR1Q06630 226 aa1.93□□□□□ -2.1
SEC16YPL085W YOR186WQ08560 144 aa1.93□□□□□ -2.1
SEC16YPL085W YLR146W-AQ2V2P1 62 aa1.93□□□□□ -2.1
SEC16YPL085W RPL25P04456 142 aaKnown RBP1.93□□□□□ -2.1
SEC16YPL085W ELO2P25358 347 aa1.93□□□□□ -2.1
SEC16YPL085W POR2P40478 281 aa1.93□□□□□ -2.1
SEC16YPL085W BNA2P47125 453 aa1.93□□□□□ -2.1
SEC16YPL085W NIT3P49954 291 aa1.93□□□□□ -2.1
SEC16YPL085W GTO3Q04806 366 aa1.93□□□□□ -2.1
SEC16YPL085W YOR105WQ08504 108 aa1.93□□□□□ -2.1
SEC16YPL085W ALG6Q12001 544 aaKnown RBP1.93□□□□□ -2.1
SEC16YPL085W TIR4Q12218 487 aaPredicted RBP1.93□□□□□ -2.1
SEC16YPL085W RAD6P06104 172 aa1.93□□□□□ -2.1
SEC16YPL085W HYP2P23301 157 aaKnown RBP1.93□□□□□ -2.1
SEC16YPL085W OCH1P31755 480 aa1.93□□□□□ -2.1
SEC16YPL085W LEU5P38702 357 aa1.93□□□□□ -2.1
SEC16YPL085W MST28P39552 234 aa1.93□□□□□ -2.1
SEC16YPL085W MIT1P40002 666 aa1.93□□□□□ -2.1
SEC16YPL085W EMC5P40540 141 aa1.93□□□□□ -2.1
SEC16YPL085W SFT1P43682 97 aa1.93□□□□□ -2.1
SEC16YPL085W MIC27P50945 234 aa1.93□□□□□ -2.1
SEC16YPL085W ARE2P53629 642 aaKnown RBP1.93□□□□□ -2.1
SEC16YPL085W ATP19P81451 68 aa1.93□□□□□ -2.1
SEC16YPL085W MSC3Q05812 728 aa1.93□□□□□ -2.1
SEC16YPL085W YLR224WQ05947 369 aa1.93□□□□□ -2.1
SEC16YPL085W NAT3Q06504 195 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 82 ms