RNA–Protein interactions for RNA: YOR060C

SLD7, Transcript of Protein with a role in chromosomal DNA replication, yeast

Gene SLD7, Length 774 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLD7	YOR060C	CDC8	P00572	216 aa		4.14	□□□□□ -1.75
SLD7	YOR060C	YAP3	P38749	330 aa		4.14	□□□□□ -1.75
SLD7	YOR060C	GIM4	P40005	111 aa	Known RBP	4.14	□□□□□ -1.75
SLD7	YOR060C	GLE2	P40066	365 aa		4.14	□□□□□ -1.75
SLD7	YOR060C	YGL088W	P53151	121 aa		4.14	□□□□□ -1.75
SLD7	YOR060C	MAK3	Q03503	176 aa		4.14	□□□□□ -1.75
SLD7	YOR060C	PLP1	Q04004	230 aa		4.14	□□□□□ -1.75
SLD7	YOR060C	YOR283W	Q12040	230 aa	Known RBP	4.14	□□□□□ -1.75
SLD7	YOR060C	MBF1	O14467	151 aa	Known RBP	4.13	□□□□□ -1.75
SLD7	YOR060C	VMA11	P32842	164 aa		4.13	□□□□□ -1.75
SLD7	YOR060C	CLG1	P35190	452 aa		4.13	□□□□□ -1.75
SLD7	YOR060C	YER076C	P40049	302 aa		4.13	□□□□□ -1.75
SLD7	YOR060C	CMD1	P06787	147 aa	Known RBP	4.12	□□□□□ -1.75
SLD7	YOR060C	SNF4	P12904	322 aa		4.12	□□□□□ -1.75
SLD7	YOR060C	PET9	P18239	318 aa	Known RBP	4.12	□□□□□ -1.75
SLD7	YOR060C	MIG1	P27705	504 aa		4.12	□□□□□ -1.75
SLD7	YOR060C	COS6	P53344	381 aa		4.12	□□□□□ -1.75
SLD7	YOR060C	RIO1	Q12196	484 aa	Known RBP	4.12	□□□□□ -1.75
SLD7	YOR060C	PEX11	Q12462	236 aa		4.12	□□□□□ -1.75
SLD7	YOR060C	RPB3	P16370	318 aa	Known RBP	4.11	□□□□□ -1.75
SLD7	YOR060C	BET1	P22804	142 aa		4.11	□□□□□ -1.75
SLD7	YOR060C	SEC14	P24280	304 aa	Known RBP	4.11	□□□□□ -1.75
SLD7	YOR060C	YCR090C	P25654	182 aa	Known RBP	4.11	□□□□□ -1.75
SLD7	YOR060C	SCM4	P32564	187 aa		4.11	□□□□□ -1.75
SLD7	YOR060C	EDC3	P39998	551 aa	Known RBP	4.11	□□□□□ -1.75
SLD7	YOR060C	LSM4	P40070	187 aa	Known RBP	4.11	□□□□□ -1.75
SLD7	YOR060C	ICE2	P40499	491 aa		4.11	□□□□□ -1.75
SLD7	YOR060C	FMP32	P43557	207 aa		4.11	□□□□□ -1.75
SLD7	YOR060C	SUE1	Q06524	206 aa		4.11	□□□□□ -1.75
SLD7	YOR060C	RPL26A	P05743	127 aa	Known RBP	4.1	□□□□□ -1.75
SLD7	YOR060C	SCO1	P23833	295 aa		4.1	□□□□□ -1.75
SLD7	YOR060C	ARO7	P32178	256 aa		4.1	□□□□□ -1.75
SLD7	YOR060C	NUF2	P33895	451 aa		4.1	□□□□□ -1.75
SLD7	YOR060C	MED6	P38782	295 aa		4.1	□□□□□ -1.75
SLD7	YOR060C	SPO73	P40031	143 aa		4.1	□□□□□ -1.75
SLD7	YOR060C	ARP3	P47117	449 aa	Known RBP	4.1	□□□□□ -1.75
SLD7	YOR060C	RPL26B	P53221	127 aa	Known RBP	4.1	□□□□□ -1.75
SLD7	YOR060C	NQM1	P53228	333 aa	Predicted RBP	4.1	□□□□□ -1.75
SLD7	YOR060C	SWP1	Q02795	286 aa		4.1	□□□□□ -1.75
SLD7	YOR060C	YDC1	Q02896	317 aa		4.1	□□□□□ -1.75
SLD7	YOR060C	MSW1	P04803	379 aa		4.09	□□□□□ -1.75
SLD7	YOR060C	RPS24A	P0CX31	135 aa	Known RBP	4.09	□□□□□ -1.75
SLD7	YOR060C	RPS24B	P0CX32	135 aa	Known RBP	4.09	□□□□□ -1.75
SLD7	YOR060C	URA5	P13298	226 aa	Known RBP	4.09	□□□□□ -1.75
SLD7	YOR060C	SDH4	P37298	181 aa		4.09	□□□□□ -1.75
SLD7	YOR060C	YHL026C	P38740	315 aa		4.09	□□□□□ -1.75
SLD7	YOR060C	ARO8	P53090	500 aa	Known RBP	4.09	□□□□□ -1.75
SLD7	YOR060C	YGR042W	P53227	271 aa		4.09	□□□□□ -1.75
SLD7	YOR060C	RDI1	Q12434	202 aa		4.09	□□□□□ -1.75
SLD7	YOR060C	PRM7	Q12459	698 aa		4.09	□□□□□ -1.75
SLD7	YOR060C	NVJ1	P38881	321 aa		4.08	□□□□□ -1.76
SLD7	YOR060C	PRM10	P42946	383 aa		4.08	□□□□□ -1.76
SLD7	YOR060C	SNX4	P47057	423 aa		4.08	□□□□□ -1.76
SLD7	YOR060C	AIF1	P52923	378 aa		4.08	□□□□□ -1.76
SLD7	YOR060C	YDR476C	Q03362	224 aa		4.08	□□□□□ -1.76
SLD7	YOR060C	DYN3	Q04949	312 aa		4.08	□□□□□ -1.76
SLD7	YOR060C	YLR031W	Q07978	186 aa		4.08	□□□□□ -1.76
SLD7	YOR060C	PET54	P10834	293 aa		4.07	□□□□□ -1.76
SLD7	YOR060C	CKS1	P20486	150 aa	Known RBP	4.07	□□□□□ -1.76
SLD7	YOR060C	FMP23	P38231	175 aa		4.07	□□□□□ -1.76
SLD7	YOR060C	MNN5	P46982	586 aa		4.07	□□□□□ -1.76
SLD7	YOR060C	MOG1	P47123	218 aa		4.07	□□□□□ -1.76
SLD7	YOR060C	YJR146W	P47174	117 aa		4.07	□□□□□ -1.76
SLD7	YOR060C	HPT1	Q04178	221 aa	Known RBP	4.07	□□□□□ -1.76
SLD7	YOR060C	TSC3	Q3E790	80 aa		4.07	□□□□□ -1.76
SLD7	YOR060C	TIM9	O74700	87 aa		4.06	□□□□□ -1.76
SLD7	YOR060C	AHC2	P25649	128 aa		4.06	□□□□□ -1.76
SLD7	YOR060C	MRPL17	P36528	281 aa		4.06	□□□□□ -1.76
SLD7	YOR060C	SKI6	P46948	246 aa	Predicted RBP	4.06	□□□□□ -1.76
SLD7	YOR060C	YJL144W	P47009	104 aa		4.06	□□□□□ -1.76
SLD7	YOR060C	DSK2	P48510	373 aa		4.06	□□□□□ -1.76
SLD7	YOR060C	AIM34	Q03673	198 aa		4.06	□□□□□ -1.76
SLD7	YOR060C	HNT1	Q04344	158 aa	Known RBP	4.06	□□□□□ -1.76
SLD7	YOR060C	YPR127W	Q06494	345 aa		4.06	□□□□□ -1.76
SLD7	YOR060C	FKS1	P38631	1876 aa	Known RBP	4.06	□□□□□ -1.76
SLD7	YOR060C	YIL177C	P40434	1758 aa		4.05	□□□□□ -1.76
SLD7	YOR060C	YJL225C	P40889	1758 aa		4.05	□□□□□ -1.76
SLD7	YOR060C	ATP15	P21306	62 aa		4.05	□□□□□ -1.76
SLD7	YOR060C	BUB2	P26448	306 aa	Predicted RBP	4.05	□□□□□ -1.76
SLD7	YOR060C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SLD7	YOR060C	YHR180W	P38868	163 aa		4.05	□□□□□ -1.76
SLD7	YOR060C	YJR111C	P47148	283 aa	Known RBP	4.05	□□□□□ -1.76
SLD7	YOR060C	YGL204C	P53089	101 aa		4.05	□□□□□ -1.76
SLD7	YOR060C	NEJ1	Q06148	342 aa		4.05	□□□□□ -1.76
SLD7	YOR060C	SHH4	Q06236	168 aa		4.05	□□□□□ -1.76
SLD7	YOR060C	MHT1	Q12525	324 aa		4.05	□□□□□ -1.76
SLD7	YOR060C	FAB1	P34756	2278 aa		4.04	□□□□□ -1.76
SLD7	YOR060C	TMA20	P89886	181 aa	Predicted RBP	4.04	□□□□□ -1.76
SLD7	YOR060C	SPG3	Q04398	127 aa	Predicted RBP	4.04	□□□□□ -1.76
SLD7	YOR060C	RDS3	Q06835	107 aa	Predicted RBP	4.04	□□□□□ -1.76
SLD7	YOR060C	EFG1	Q3E705	233 aa	Known RBP	4.04	□□□□□ -1.76
SLD7	YOR060C	OCH1	P31755	480 aa		4.03	□□□□□ -1.76
SLD7	YOR060C	SLM2	P53955	656 aa		4.03	□□□□□ -1.76
SLD7	YOR060C	DGA1	Q08650	418 aa		4.03	□□□□□ -1.76
SLD7	YOR060C	YPR014C	Q6B0W2	109 aa		4.03	□□□□□ -1.76
SLD7	YOR060C	TAF2	P23255	1407 aa		4.03	□□□□□ -1.76
SLD7	YOR060C	MRPS28	P21771	286 aa		4.02	□□□□□ -1.77
SLD7	YOR060C	UPS2	P35200	230 aa		4.02	□□□□□ -1.77
SLD7	YOR060C	PGA1	P53896	198 aa		4.02	□□□□□ -1.77
SLD7	YOR060C	YPR096C	O13587	100 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms