RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	LRE1	P25579	583 aa	Known RBP	6.33	□□□□□ -1.4
MSB3	YNL293W	ATS1	P31386	333 aa		6.33	□□□□□ -1.4
MSB3	YNL293W	SKN1	P33336	771 aa		6.33	□□□□□ -1.4
MSB3	YNL293W	PTH1	P38876	190 aa	Known RBP	6.33	□□□□□ -1.4
MSB3	YNL293W	YEL068C	P39977	110 aa		6.33	□□□□□ -1.4
MSB3	YNL293W	TRM112	P53738	135 aa	Predicted RBP	6.33	□□□□□ -1.4
MSB3	YNL293W	TEX1	P53851	422 aa	Known RBP	6.33	□□□□□ -1.4
MSB3	YNL293W	SNP1	Q00916	300 aa	Predicted RBP	6.33	□□□□□ -1.4
MSB3	YNL293W	GRH1	Q04410	372 aa	Known RBP	6.33	□□□□□ -1.4
MSB3	YNL293W	SWT1	Q12104	458 aa		6.33	□□□□□ -1.4
MSB3	YNL293W	VPS63	O13549	108 aa		6.32	□□□□□ -1.4
MSB3	YNL293W	HYP2	P23301	157 aa	Known RBP	6.32	□□□□□ -1.4
MSB3	YNL293W	CNE1	P27825	502 aa		6.32	□□□□□ -1.4
MSB3	YNL293W	GAR1	P28007	205 aa	Known RBP	6.32	□□□□□ -1.4
MSB3	YNL293W	RCR1	P38212	213 aa		6.32	□□□□□ -1.4
MSB3	YNL293W	YBR090C	P38253	122 aa		6.32	□□□□□ -1.4
MSB3	YNL293W	TIF34	P40217	347 aa	Known RBP	6.32	□□□□□ -1.4
MSB3	YNL293W	UBP8	P50102	471 aa		6.32	□□□□□ -1.4
MSB3	YNL293W	LYS5	P50113	272 aa		6.32	□□□□□ -1.4
MSB3	YNL293W	ARR3	Q06598	404 aa		6.32	□□□□□ -1.4
MSB3	YNL293W	RRT7	Q07829	113 aa		6.32	□□□□□ -1.4
MSB3	YNL293W	NRT1	Q08485	598 aa		6.32	□□□□□ -1.4
MSB3	YNL293W	RAS1	P01119	309 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	STE7	P06784	515 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	MSS51	P32335	436 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	TKL2	P33315	681 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	DUT1	P33317	147 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	YKL107W	P34251	309 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	UMP1	P38293	148 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	YHR138C	P38841	114 aa	Predicted RBP	6.31	□□□□□ -1.4
MSB3	YNL293W	YNR048W	P53740	393 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	YNL165W	P53891	406 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	IGO1	P53897	168 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	YMR206W	Q03695	313 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	NUP53	Q03790	475 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	LIP2	Q06005	328 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	YOR385W	Q08909	290 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	YLR415C	O13578	112 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	POR1	P04840	283 aa	Known RBP	6.31	□□□□□ -1.4
MSB3	YNL293W	HTA1	P04911	132 aa	Known RBP	6.31	□□□□□ -1.4
MSB3	YNL293W	HEM2	P05373	342 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	RPL7A	P05737	244 aa	Known RBP	6.31	□□□□□ -1.4
MSB3	YNL293W	HVG1	P0CE11	249 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	MAK32	P23060	363 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	GRX1	P25373	110 aa	Known RBP	6.31	□□□□□ -1.4
MSB3	YNL293W	PMI40	P29952	429 aa	Known RBP	6.31	□□□□□ -1.4
MSB3	YNL293W	FKS1	P38631	1876 aa	Known RBP	6.31	□□□□□ -1.4
MSB3	YNL293W	CTF8	P38877	133 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	YNR040W	P53736	256 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	TAZ1	Q06510	381 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	ICT1	Q12385	394 aa		6.31	□□□□□ -1.4
MSB3	YNL293W	HMRA1	P0CY11	126 aa		6.3	□□□□□ -1.4
MSB3	YNL293W	PRO1	P32264	428 aa		6.3	□□□□□ -1.4
MSB3	YNL293W	PAU24	P38155	120 aa		6.3	□□□□□ -1.4
MSB3	YNL293W	YHL026C	P38740	315 aa		6.3	□□□□□ -1.4
MSB3	YNL293W	AIR1	P40507	360 aa	Known RBP	6.3	□□□□□ -1.4
MSB3	YNL293W	ABF2	Q02486	183 aa		6.3	□□□□□ -1.4
MSB3	YNL293W	IRC15	Q02733	499 aa		6.3	□□□□□ -1.4
MSB3	YNL293W	OPI10	Q08202	246 aa		6.3	□□□□□ -1.4
MSB3	YNL293W	YPL162C	Q12042	273 aa		6.3	□□□□□ -1.4
MSB3	YNL293W	YLR146W-A	Q2V2P1	62 aa		6.3	□□□□□ -1.4
MSB3	YNL293W	YLR363W-A	Q3E747	85 aa		6.3	□□□□□ -1.4
MSB3	YNL293W	CTA1	P15202	515 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	CDC43	P18898	376 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	SLY41	P22215	453 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	SCO1	P23833	295 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	HXT4	P32467	576 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	HSP10	P38910	106 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	YND1	P40009	630 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	YIL165C	P40446	119 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	UBX6	P47049	396 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	IBD2	P53892	351 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	INP1	Q03694	420 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	YBL112C	Q3E7Y4	105 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	CPT1	P17898	393 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	FRM2	P37261	193 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	ATX1	P38636	73 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	DLS1	P40366	167 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	AQR1	P53943	586 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	ASM4	Q05166	528 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	DAP1	Q12091	152 aa		6.29	□□□□□ -1.4
MSB3	YNL293W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
MSB3	YNL293W	UME6	P39001	836 aa		6.28	□□□□□ -1.4
MSB3	YNL293W	HMF1	P40037	129 aa	Known RBP	6.28	□□□□□ -1.4
MSB3	YNL293W	RPL34B	P40525	121 aa	Known RBP	6.28	□□□□□ -1.4
MSB3	YNL293W	MEP2	P41948	499 aa		6.28	□□□□□ -1.4
MSB3	YNL293W	YFR057W	P43625	151 aa		6.28	□□□□□ -1.4
MSB3	YNL293W	YJL028W	P47062	111 aa		6.28	□□□□□ -1.4
MSB3	YNL293W	YGL230C	P53074	147 aa		6.28	□□□□□ -1.4
MSB3	YNL293W	HNT1	Q04344	158 aa	Known RBP	6.28	□□□□□ -1.4
MSB3	YNL293W	BSC1	Q12140	328 aa		6.28	□□□□□ -1.4
MSB3	YNL293W	YOR015W	Q12169	119 aa		6.28	□□□□□ -1.4
MSB3	YNL293W	YIL102C-A	Q2V2P5	75 aa		6.28	□□□□□ -1.4
MSB3	YNL293W	DED1	P06634	604 aa	Known RBP	6.27	□□□□□ -1.41
MSB3	YNL293W	YIL059C	P40520	121 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	TES1	P41903	349 aa	Known RBP	6.27	□□□□□ -1.41
MSB3	YNL293W	XPT1	P47165	209 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	PAU12	P53343	120 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	YMR252C	Q04814	134 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	TRI1	Q05024	226 aa		6.27	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 90.2 ms