RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT21	YMR179W	YKE4	P40544	346 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	DAN1	P47178	298 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	UBC12	P52491	188 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	RTC4	P53850	401 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	YNL184C	P53876	108 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	DAD3	P69850	94 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	SNO1	Q03144	224 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	GRX8	Q05926	109 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	YET3	Q07451	203 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	TSC3	Q3E790	80 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	RAS2	P01120	322 aa	Known RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	PET9	P18239	318 aa	Known RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	CKS1	P20486	150 aa	Known RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	PHO88	P38264	188 aa	Predicted RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	FCY21	P40039	528 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	ICE2	P40499	491 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	GVP36	P40531	326 aa	Known RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	RPL33B	P41056	107 aa	Known RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	YIP3	P53633	176 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	NRK1	P53915	240 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	HNT1	Q04344	158 aa	Known RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.81	□□□□□ -2.28	not detected
SPT21	YMR179W	YOL024W	Q08172	172 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	YOR283W	Q12040	230 aa	Known RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	RIO1	Q12196	484 aa	Known RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	FBA1	P14540	359 aa	Known RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	TRX3	P25372	127 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	SNC2	P33328	115 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	TIR3	P40552	269 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	YJL027C	P47063	138 aa	Predicted RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	ARP3	P47117	449 aa	Known RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	DOC1	P53068	250 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	ARO8	P53090	500 aa	Known RBP	0.81	□□□□□ -2.28
SPT21	YMR179W	YDR274C	P87283	123 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	CYT2	Q00873	224 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	GIM5	Q04493	163 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	FUS2	Q05670	677 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	YLR036C	Q07986	203 aa		0.81	□□□□□ -2.28
SPT21	YMR179W	SNF4	P12904	322 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
SPT21	YMR179W	YCR090C	P25654	182 aa	Known RBP	0.8	□□□□□ -2.28
SPT21	YMR179W	YET1	P35723	206 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	YKR041W	P36134	250 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	YHR022C	P38763	256 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	YJR111C	P47148	283 aa	Known RBP	0.8	□□□□□ -2.28
SPT21	YMR179W	ERG25	P53045	309 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.8	□□□□□ -2.28
SPT21	YMR179W	CPA1	P07258	411 aa	Known RBP	0.8	□□□□□ -2.28
SPT21	YMR179W	DDI2	P0CH63	225 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	DDI3	P0CH64	225 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	RPL35A	P0CX84	120 aa	Known RBP	0.8	□□□□□ -2.28
SPT21	YMR179W	RPL35B	P0CX85	120 aa	Known RBP	0.8	□□□□□ -2.28
SPT21	YMR179W	OCH1	P31755	480 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	RME1	P32338	300 aa	Known RBP	0.8	□□□□□ -2.28
SPT21	YMR179W	ECM4	P36156	370 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	NRG2	P38082	220 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	OPY1	P38271	328 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	SVP26	P38869	228 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	SRP14	P38985	146 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	AIM2	P39721	246 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	SER2	P42941	309 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	SKI6	P46948	246 aa	Predicted RBP	0.8	□□□□□ -2.28
SPT21	YMR179W	EAF6	P47128	113 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	BOL2	P53082	120 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	JAC1	P53193	184 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	YNR077C	P53758	84 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	YLR031W	Q07978	186 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	DGA1	Q08650	418 aa		0.8	□□□□□ -2.28
SPT21	YMR179W	FSF1	Q12029	327 aa	Known RBP	0.8	□□□□□ -2.28
SPT21	YMR179W	AHC2	P25649	128 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	TRR1	P29509	319 aa	Known RBP	0.79	□□□□□ -2.28
SPT21	YMR179W	CLG1	P35190	452 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	KDX1	P36005	433 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	VPS51	P36116	164 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	YBR285W	P38354	144 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	YEA4	P40004	342 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	YNL217W	P40152	326 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	AGE2	P40529	298 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	YLR460C	P54007	376 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	AIM34	Q03673	198 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	YOL014W	Q08110	124 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	BRX1	Q08235	291 aa	Known RBP	0.79	□□□□□ -2.28
SPT21	YMR179W	YHR086W-A	Q3E746	53 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	CMC2	Q3E7A4	109 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	YIL177C	P40434	1758 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	YJL225C	P40889	1758 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	PDR18	P53756	1333 aa		0.79	□□□□□ -2.28
SPT21	YMR179W	POR1	P04840	283 aa	Known RBP	0.78	□□□□□ -2.28
SPT21	YMR179W	RPS24A	P0CX31	135 aa	Known RBP	0.78	□□□□□ -2.28
SPT21	YMR179W	RPS24B	P0CX32	135 aa	Known RBP	0.78	□□□□□ -2.28
SPT21	YMR179W	RAD51	P25454	400 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	MGT1	P26188	188 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	PAN3	P36102	679 aa	Predicted RBP	0.78	□□□□□ -2.28
SPT21	YMR179W	FMP23	P38231	175 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	FMP32	P43557	207 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	TDA4	P47153	279 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	YNL247W	P53852	767 aa	Known RBP	0.78	□□□□□ -2.28
SPT21	YMR179W	PGA1	P53896	198 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	YNL140C	P53910	189 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	YMR315W	Q04869	349 aa	Known RBP	0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms