RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C MRPS28P21771 286 aa2.78□□□□□ -1.96
CTF18YMR078C DSE2P38844 325 aa2.78□□□□□ -1.96
CTF18YMR078C ERG10P41338 398 aaKnown RBP2.78□□□□□ -1.96
CTF18YMR078C URA5P13298 226 aaKnown RBP2.77□□□□□ -1.97
CTF18YMR078C HMF1P40037 129 aaKnown RBP2.77□□□□□ -1.97
CTF18YMR078C IKI3Q06706 1349 aaKnown RBP2.77□□□□□ -1.97
CTF18YMR078C RPL27AP0C2H6 136 aaKnown RBP2.77□□□□□ -1.97
CTF18YMR078C ASF2P32448 525 aaPredicted RBP2.76□□□□□ -1.97
CTF18YMR078C PEP8P40335 379 aa2.76□□□□□ -1.97
CTF18YMR078C LSM4P40070 187 aaKnown RBP2.75□□□□□ -1.97
CTF18YMR078C YNL217WP40152 326 aa2.75□□□□□ -1.97
CTF18YMR078C EAF6P47128 113 aa2.75□□□□□ -1.97
CTF18YMR078C YDR274CP87283 123 aa2.75□□□□□ -1.97
CTF18YMR078C FSF1Q12029 327 aaKnown RBP2.75□□□□□ -1.97
CTF18YMR078C CNB1P25296 175 aa2.74□□□□□ -1.97
CTF18YMR078C SML1Q04964 104 aa2.74□□□□□ -1.97
CTF18YMR078C GPM2Q12008 311 aa2.74□□□□□ -1.97
CTF18YMR078C BEM2P39960 2167 aaKnown RBP2.74□□□□□ -1.97
CTF18YMR078C YET1P35723 206 aa2.74□□□□□ -1.97
CTF18YMR078C CPA1P07258 411 aaKnown RBP2.73□□□□□ -1.97
CTF18YMR078C MDH2P22133 377 aa2.73□□□□□ -1.97
CTF18YMR078C BAT2P47176 376 aaKnown RBP2.73□□□□□ -1.97
CTF18YMR078C ARO80Q04052 950 aa2.73□□□□□ -1.97
CTF18YMR078C SIR2P06700 562 aa2.73□□□□□ -1.97
CTF18YMR078C SNC2P33328 115 aa2.73□□□□□ -1.97
CTF18YMR078C FZF1P32805 299 aa2.72□□□□□ -1.97
CTF18YMR078C AVT2P39981 480 aa2.72□□□□□ -1.97
CTF18YMR078C ARP3P47117 449 aaKnown RBP2.72□□□□□ -1.97
CTF18YMR078C GAA1P39012 614 aa2.71□□□□□ -1.98
CTF18YMR078C UBC12P52491 188 aa2.71□□□□□ -1.98
CTF18YMR078C OCH1P31755 480 aa2.7□□□□□ -1.98
CTF18YMR078C YBR285WP38354 144 aa2.7□□□□□ -1.98
CTF18YMR078C HNT1Q04344 158 aaKnown RBP2.7□□□□□ -1.98
CTF18YMR078C YNL184CP53876 108 aa2.7□□□□□ -1.98
CTF18YMR078C GLE2P40066 365 aa2.69□□□□□ -1.98
CTF18YMR078C MBF1O14467 151 aaKnown RBP2.69□□□□□ -1.98
CTF18YMR078C GIM3P53900 129 aa2.69□□□□□ -1.98
CTF18YMR078C BUD25P85052 153 aa2.69□□□□□ -1.98
CTF18YMR078C CKS1P20486 150 aaKnown RBP2.68□□□□□ -1.98
CTF18YMR078C OPY1P38271 328 aa2.68□□□□□ -1.98
CTF18YMR078C YBR219CP38317 127 aa2.68□□□□□ -1.98
CTF18YMR078C VTC1P40046 129 aaRIP-Chip data2.68□□□□□ -1.98not detected
CTF18YMR078C YFR054CP43622 192 aa2.68□□□□□ -1.98
CTF18YMR078C SKI6P46948 246 aaPredicted RBP2.68□□□□□ -1.98
CTF18YMR078C MPC3P53311 146 aa2.68□□□□□ -1.98
CTF18YMR078C IGO2Q9P305 131 aa2.68□□□□□ -1.98
CTF18YMR078C KDX1P36005 433 aa2.67□□□□□ -1.98
CTF18YMR078C YER135CP40082 130 aa2.67□□□□□ -1.98
CTF18YMR078C ATG40Q99325 256 aa2.67□□□□□ -1.98
CTF18YMR078C CHD1P32657 1468 aa2.66□□□□□ -1.98
CTF18YMR078C SHE2P36068 246 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
CTF18YMR078C FMP23P38231 175 aa2.66□□□□□ -1.98
CTF18YMR078C ODC2Q99297 307 aa2.66□□□□□ -1.98
CTF18YMR078C YKR045CP36138 183 aa2.66□□□□□ -1.98
CTF18YMR078C POP3P53833 195 aaPredicted RBP2.66□□□□□ -1.98
CTF18YMR078C ATG38Q05789 226 aaKnown RBP2.66□□□□□ -1.98
CTF18YMR078C VMA22P38784 181 aa2.65□□□□□ -1.98
CTF18YMR078C YLR162WQ06235 118 aa2.65□□□□□ -1.98
CTF18YMR078C NOC4Q06512 552 aaPredicted RBP2.65□□□□□ -1.98
CTF18YMR078C GRE1Q08969 168 aa2.65□□□□□ -1.98
CTF18YMR078C RIO1Q12196 484 aaKnown RBP2.65□□□□□ -1.98
CTF18YMR078C FLO9P39712 1322 aa2.65□□□□□ -1.98
CTF18YMR078C YJR111CP47148 283 aaKnown RBP2.65□□□□□ -1.99
CTF18YMR078C YLR236CA0A023PZG4 107 aa2.64□□□□□ -1.99
CTF18YMR078C CSI2Q08054 341 aa2.64□□□□□ -1.99
CTF18YMR078C YOL024WQ08172 172 aa2.64□□□□□ -1.99
CTF18YMR078C YCR090CP25654 182 aaKnown RBP2.64□□□□□ -1.99
CTF18YMR078C ARO8P53090 500 aaKnown RBP2.64□□□□□ -1.99
CTF18YMR078C DGA1Q08650 418 aa2.64□□□□□ -1.99
CTF18YMR078C YEA4P40004 342 aa2.63□□□□□ -1.99
CTF18YMR078C PDS1P40316 373 aaPredicted RBP2.63□□□□□ -1.99
CTF18YMR078C SER2P42941 309 aa2.63□□□□□ -1.99
CTF18YMR078C POR1P04840 283 aaKnown RBP2.62□□□□□ -1.99
CTF18YMR078C PAN3P36102 679 aaPredicted RBP2.62□□□□□ -1.99
CTF18YMR078C KNH1P50112 268 aa2.62□□□□□ -1.99
CTF18YMR078C FUS2Q05670 677 aa2.62□□□□□ -1.99
CTF18YMR078C RTC4P53850 401 aa2.62□□□□□ -1.99
CTF18YMR078C NRK1P53915 240 aa2.62□□□□□ -1.99
CTF18YMR078C SNO1Q03144 224 aa2.62□□□□□ -1.99
CTF18YMR078C ANT1Q06497 328 aa2.62□□□□□ -1.99
CTF18YMR078C SPO13P23624 291 aa2.61□□□□□ -1.99
CTF18YMR078C TAH1P25638 111 aaPredicted RBP2.61□□□□□ -1.99
CTF18YMR078C ATP7P30902 174 aa2.61□□□□□ -1.99
CTF18YMR078C YBR209WP38311 105 aa2.61□□□□□ -1.99
CTF18YMR078C YKR041WP36134 250 aa2.61□□□□□ -1.99
CTF18YMR078C HOP2P53187 214 aa2.61□□□□□ -1.99
CTF18YMR078C GRX8Q05926 109 aa2.61□□□□□ -1.99
CTF18YMR078C MET5P47169 1442 aa2.6□□□□□ -1.99
CTF18YMR078C SNF4P12904 322 aa2.6□□□□□ -1.99
CTF18YMR078C NUP49Q02199 472 aa2.6□□□□□ -1.99
CTF18YMR078C NAT3Q06504 195 aa2.6□□□□□ -1.99
CTF18YMR078C YOL014WQ08110 124 aa2.6□□□□□ -1.99
CTF18YMR078C YAR023CD6VPM8 179 aa2.59□□□□□ -1.99
CTF18YMR078C SAY1P53324 424 aa2.59□□□□□ -1.99
CTF18YMR078C TFC1P32367 649 aa2.58□□□□□ -2
CTF18YMR078C TMA19P35691 167 aaKnown RBP2.58□□□□□ -2
CTF18YMR078C CAF4P36130 643 aa2.58□□□□□ -2
CTF18YMR078C ERJ5P43613 295 aaPredicted RBP2.58□□□□□ -2
CTF18YMR078C YLR031WQ07978 186 aa2.58□□□□□ -2
CTF18YMR078C SHG1P38337 142 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms