RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C RPL13BP40212 199 aaKnown RBP1.1□□□□□ -2.23
CMS1YLR003C YGR050CP53231 118 aa1.1□□□□□ -2.23
CMS1YLR003C LSM7P53905 115 aaKnown RBP1.1□□□□□ -2.23
CMS1YLR003C TIM11P81449 96 aaPredicted RBP1.1□□□□□ -2.23
CMS1YLR003C PET191Q02772 108 aa1.1□□□□□ -2.23
CMS1YLR003C RPL13AQ12690 199 aaPredicted RBP1.1□□□□□ -2.23
CMS1YLR003C SIR2P06700 562 aa1.09□□□□□ -2.23
CMS1YLR003C SEC4P07560 215 aaKnown RBP1.09□□□□□ -2.23
CMS1YLR003C RPL2AP0CX45 254 aaKnown RBP1.09□□□□□ -2.23
CMS1YLR003C RPL2BP0CX46 254 aaKnown RBP1.09□□□□□ -2.23
CMS1YLR003C MATALPHA2P0CY08 210 aa1.09□□□□□ -2.23
CMS1YLR003C HMLALPHA2P0CY09 210 aa1.09□□□□□ -2.23
CMS1YLR003C GPA2P10823 449 aa1.09□□□□□ -2.23
CMS1YLR003C RPB4P20433 221 aaPredicted RBP1.09□□□□□ -2.23
CMS1YLR003C TAF14P35189 244 aa1.09□□□□□ -2.23
CMS1YLR003C TMA19P35691 167 aaKnown RBP1.09□□□□□ -2.23
CMS1YLR003C YBR220CP38318 560 aa1.09□□□□□ -2.23
CMS1YLR003C YBR285WP38354 144 aa1.09□□□□□ -2.23
CMS1YLR003C IKI1P38874 309 aa1.09□□□□□ -2.23
CMS1YLR003C HMF1P40037 129 aaKnown RBP1.09□□□□□ -2.23
CMS1YLR003C YDR249CQ03787 373 aa1.09□□□□□ -2.23
CMS1YLR003C ANT1Q06497 328 aa1.09□□□□□ -2.23
CMS1YLR003C GPM2Q12008 311 aa1.09□□□□□ -2.23
CMS1YLR003C MAG1P22134 296 aaKnown RBP1.08□□□□□ -2.24
CMS1YLR003C RFA3P26755 122 aaKnown RBP1.08□□□□□ -2.24
CMS1YLR003C TFC1P32367 649 aa1.08□□□□□ -2.24
CMS1YLR003C YBR209WP38311 105 aa1.08□□□□□ -2.24
CMS1YLR003C ATG40Q99325 256 aa1.08□□□□□ -2.24
CMS1YLR003C IKI3Q06706 1349 aaKnown RBP1.08□□□□□ -2.24
CMS1YLR003C RPB3P16370 318 aaKnown RBP1.07□□□□□ -2.24
CMS1YLR003C YKT6P36015 200 aaKnown RBP1.07□□□□□ -2.24
CMS1YLR003C TVP38P36164 337 aa1.07□□□□□ -2.24
CMS1YLR003C RFC4P40339 323 aaKnown RBP1.07□□□□□ -2.24
CMS1YLR003C KNH1P50112 268 aa1.07□□□□□ -2.24
CMS1YLR003C COG5P53951 403 aa1.07□□□□□ -2.24
CMS1YLR003C YMR226CQ05016 267 aaKnown RBP1.07□□□□□ -2.24
CMS1YLR003C FSF1Q12029 327 aaKnown RBP1.07□□□□□ -2.24
CMS1YLR003C YLR236CA0A023PZG4 107 aa1.06□□□□□ -2.24
CMS1YLR003C ATP15P21306 62 aa1.06□□□□□ -2.24
CMS1YLR003C CGR1P53188 120 aa1.06□□□□□ -2.24
CMS1YLR003C CUE4Q04201 117 aaPredicted RBP1.06□□□□□ -2.24
CMS1YLR003C HNT1Q04344 158 aaKnown RBP1.06□□□□□ -2.24
CMS1YLR003C RAD28Q12021 506 aa1.06□□□□□ -2.24
CMS1YLR003C RPL27AP0C2H6 136 aaKnown RBP1.05□□□□□ -2.24
CMS1YLR003C AIM2P39721 246 aa1.05□□□□□ -2.24
CMS1YLR003C MMS2P53152 137 aa1.05□□□□□ -2.24
CMS1YLR003C CUS2P53830 285 aaPredicted RBP1.05□□□□□ -2.24
CMS1YLR003C MZM1Q03429 123 aaPredicted RBP1.05□□□□□ -2.24
CMS1YLR003C FUS2Q05670 677 aa1.05□□□□□ -2.24
CMS1YLR003C YDL180WQ12301 547 aa1.05□□□□□ -2.24
CMS1YLR003C MSB2P32334 1306 aa1.05□□□□□ -2.24
CMS1YLR003C OPY1P38271 328 aa1.04□□□□□ -2.24
CMS1YLR003C GET1P53192 235 aa1.04□□□□□ -2.24
CMS1YLR003C CWC21Q03375 135 aaKnown RBP1.04□□□□□ -2.24
CMS1YLR003C RIO1Q12196 484 aaKnown RBP1.04□□□□□ -2.24
CMS1YLR003C YCR090CP25654 182 aaKnown RBP1.03□□□□□ -2.24
CMS1YLR003C UPS2P35200 230 aa1.03□□□□□ -2.24
CMS1YLR003C PAN3P36102 679 aaPredicted RBP1.03□□□□□ -2.24
CMS1YLR003C POP3P53833 195 aaPredicted RBP1.03□□□□□ -2.24
CMS1YLR003C MRPS17Q03246 237 aaPredicted RBP1.03□□□□□ -2.24
CMS1YLR003C GET4Q12125 312 aa1.03□□□□□ -2.24
CMS1YLR003C IGO2Q9P305 131 aa1.03□□□□□ -2.24
CMS1YLR003C RAD9P14737 1309 aa1.03□□□□□ -2.24
CMS1YLR003C MBF1O14467 151 aaKnown RBP1.02□□□□□ -2.25
CMS1YLR003C SHE2P36068 246 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
CMS1YLR003C YPL073CP40323 161 aa1.02□□□□□ -2.25
CMS1YLR003C MPA43P53583 542 aaPredicted RBP1.02□□□□□ -2.25
CMS1YLR003C YNG1Q08465 219 aa1.02□□□□□ -2.25
CMS1YLR003C DGA1Q08650 418 aa1.02□□□□□ -2.25
CMS1YLR003C YNL146C-AQ3E7Z1 64 aa1.02□□□□□ -2.25
CMS1YLR003C POR1P04840 283 aaKnown RBP1.01□□□□□ -2.25
CMS1YLR003C MRS1P07266 363 aa1.01□□□□□ -2.25
CMS1YLR003C SEC11P15367 167 aa1.01□□□□□ -2.25
CMS1YLR003C OCH1P31755 480 aa1.01□□□□□ -2.25
CMS1YLR003C KDX1P36005 433 aa1.01□□□□□ -2.25
CMS1YLR003C ECM4P36156 370 aa1.01□□□□□ -2.25
CMS1YLR003C YER076CP40049 302 aa1.01□□□□□ -2.25
CMS1YLR003C RIO2P40160 425 aaKnown RBP1.01□□□□□ -2.25
CMS1YLR003C NOP19P53317 196 aaPredicted RBP1.01□□□□□ -2.25
CMS1YLR003C YMR099CQ03161 297 aaKnown RBP1.01□□□□□ -2.25
CMS1YLR003C YPR174CQ06616 221 aaPredicted RBP1.01□□□□□ -2.25
CMS1YLR003C YHR007C-AQ07074 71 aa1.01□□□□□ -2.25
CMS1YLR003C YOL014WQ08110 124 aa1.01□□□□□ -2.25
CMS1YLR003C ODC2Q99297 307 aa1.01□□□□□ -2.25
CMS1YLR003C SPO13P23624 291 aa1□□□□□ -2.25
CMS1YLR003C MPC3P53311 146 aa1□□□□□ -2.25
CMS1YLR003C UBC7Q02159 165 aa1□□□□□ -2.25
CMS1YLR003C YMR295CQ03559 197 aa1□□□□□ -2.25
CMS1YLR003C ABP140Q08641 628 aaKnown RBP1□□□□□ -2.25
CMS1YLR003C ADF1Q2V2Q1 113 aa1□□□□□ -2.25
CMS1YLR003C YCL012CQ8J0M4 134 aa1□□□□□ -2.25
CMS1YLR003C YEA4P40004 342 aa0.99□□□□□ -2.25
CMS1YLR003C SER2P42941 309 aa0.99□□□□□ -2.25
CMS1YLR003C ARP3P47117 449 aaKnown RBP0.99□□□□□ -2.25
CMS1YLR003C RCE1Q03530 315 aa0.99□□□□□ -2.25
CMS1YLR003C GGA1Q06336 557 aa0.99□□□□□ -2.25
CMS1YLR003C YLR036CQ07986 203 aa0.99□□□□□ -2.25
CMS1YLR003C YML100W-AQ8TGT0 57 aa0.99□□□□□ -2.25
CMS1YLR003C QCR7P00128 127 aa0.98□□□□□ -2.25
CMS1YLR003C NSP1P14907 823 aaKnown RBP0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms