RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS22	YKL193C	RPB3	P16370	318 aa	Known RBP	1.05	□□□□□ -2.24
SDS22	YKL193C	PRX1	P34227	261 aa	Known RBP	1.05	□□□□□ -2.24
SDS22	YKL193C	BMH2	P34730	273 aa	Known RBP	1.05	□□□□□ -2.24
SDS22	YKL193C	ERG28	P40030	148 aa		1.05	□□□□□ -2.24
SDS22	YKL193C	YAE1	P47118	141 aa	Predicted RBP	1.05	□□□□□ -2.24
SDS22	YKL193C	RAD28	Q12021	506 aa		1.05	□□□□□ -2.24
SDS22	YKL193C	RPL27A	P0C2H6	136 aa	Known RBP	1.04	□□□□□ -2.24
SDS22	YKL193C	PBN1	P25580	416 aa		1.04	□□□□□ -2.24
SDS22	YKL193C	YRB1	P41920	201 aa	Known RBP	1.04	□□□□□ -2.24
SDS22	YKL193C	OTU1	P43558	301 aa		1.04	□□□□□ -2.24
SDS22	YKL193C	PDR17	P53844	350 aa		1.04	□□□□□ -2.24
SDS22	YKL193C	MGM101	P32787	269 aa	Known RBP	1.03	□□□□□ -2.24
SDS22	YKL193C	KDX1	P36005	433 aa		1.03	□□□□□ -2.24
SDS22	YKL193C	YNL194C	P40169	301 aa		1.03	□□□□□ -2.24
SDS22	YKL193C	FLX1	P40464	311 aa		1.03	□□□□□ -2.24
SDS22	YKL193C	ARO8	P53090	500 aa	Known RBP	1.03	□□□□□ -2.24
SDS22	YKL193C	LSM7	P53905	115 aa	Known RBP	1.03	□□□□□ -2.24
SDS22	YKL193C	YNG1	Q08465	219 aa		1.03	□□□□□ -2.24
SDS22	YKL193C	NHP6B	P11633	99 aa	Known RBP	1.02	□□□□□ -2.25
SDS22	YKL193C	NSP1	P14907	823 aa	Known RBP	1.02	□□□□□ -2.25
SDS22	YKL193C	CBT1	P36038	271 aa	Predicted RBP	1.02	□□□□□ -2.25
SDS22	YKL193C	YER034W	P40022	185 aa	Known RBP	1.02	□□□□□ -2.25
SDS22	YKL193C	YNL247W	P53852	767 aa	Known RBP	1.02	□□□□□ -2.25
SDS22	YKL193C	COG5	P53951	403 aa		1.02	□□□□□ -2.25
SDS22	YKL193C	YDR157W	A0A023PZE8	133 aa		1.01	□□□□□ -2.25
SDS22	YKL193C	MAG1	P22134	296 aa	Known RBP	1.01	□□□□□ -2.25
SDS22	YKL193C	SOK1	P40317	901 aa		1.01	□□□□□ -2.25
SDS22	YKL193C	YFL065C	P43539	102 aa		1.01	□□□□□ -2.25
SDS22	YKL193C	IRC18	P47056	224 aa		1.01	□□□□□ -2.25
SDS22	YKL193C	MPC3	P53311	146 aa		1.01	□□□□□ -2.25
SDS22	YKL193C	RCE1	Q03530	315 aa		1.01	□□□□□ -2.25
SDS22	YKL193C	RPL25	P04456	142 aa	Known RBP	1	□□□□□ -2.25
SDS22	YKL193C	YHR212W-A	P0CX91	67 aa		1	□□□□□ -2.25
SDS22	YKL193C	PRP18	P33411	251 aa	Predicted RBP	1	□□□□□ -2.25
SDS22	YKL193C	EDC3	P39998	551 aa	Known RBP	1	□□□□□ -2.25
SDS22	YKL193C	CWC23	P52868	283 aa	Predicted RBP	1	□□□□□ -2.25
SDS22	YKL193C	CWC27	Q02770	301 aa		1	□□□□□ -2.25
SDS22	YKL193C	YHR007C-A	Q07074	71 aa		1	□□□□□ -2.25
SDS22	YKL193C	YOL160W	Q08321	113 aa		1	□□□□□ -2.25
SDS22	YKL193C	CDC33	P07260	213 aa	Known RBP	0.99	□□□□□ -2.25
SDS22	YKL193C	MER1	P16523	270 aa		0.99	□□□□□ -2.25
SDS22	YKL193C	STE18	P18852	110 aa		0.99	□□□□□ -2.25
SDS22	YKL193C	SPO13	P23624	291 aa		0.99	□□□□□ -2.25
SDS22	YKL193C	SPS18	P32572	300 aa		0.99	□□□□□ -2.25
SDS22	YKL193C	HUA1	P40325	198 aa		0.99	□□□□□ -2.25
SDS22	YKL193C	RAD17	P48581	401 aa		0.99	□□□□□ -2.25
SDS22	YKL193C	YMR007W	Q03675	126 aa		0.99	□□□□□ -2.25
SDS22	YKL193C	IKI3	Q06706	1349 aa	Known RBP	0.98	□□□□□ -2.25
SDS22	YKL193C	MDM35	O60200	86 aa		0.98	□□□□□ -2.25
SDS22	YKL193C	CKS1	P20486	150 aa	Known RBP	0.98	□□□□□ -2.25
SDS22	YKL193C	YHL042W	P38729	150 aa		0.98	□□□□□ -2.25
SDS22	YKL193C	YPL073C	P40323	161 aa		0.98	□□□□□ -2.25
SDS22	YKL193C	YRA1	Q12159	226 aa	Known RBP	0.98	□□□□□ -2.25
SDS22	YKL193C	NCB2	Q92317	146 aa		0.98	□□□□□ -2.25
SDS22	YKL193C	ODC2	Q99297	307 aa		0.98	□□□□□ -2.25
SDS22	YKL193C	COQ1	P18900	473 aa		0.97	□□□□□ -2.25
SDS22	YKL193C	OCH1	P31755	480 aa		0.97	□□□□□ -2.25
SDS22	YKL193C	TVP23	P38962	199 aa		0.97	□□□□□ -2.25
SDS22	YKL193C	HMF1	P40037	129 aa	Known RBP	0.97	□□□□□ -2.25
SDS22	YKL193C	HYR1	P40581	163 aa	Known RBP	0.97	□□□□□ -2.25
SDS22	YKL193C	MSS2	P40990	351 aa		0.97	□□□□□ -2.25
SDS22	YKL193C	HNT1	Q04344	158 aa	Known RBP	0.97	□□□□□ -2.25
SDS22	YKL193C	DGA1	Q08650	418 aa		0.97	□□□□□ -2.25
SDS22	YKL193C	POR1	P04840	283 aa	Known RBP	0.96	□□□□□ -2.26
SDS22	YKL193C	YER188C-A	P0C0V2	99 aa		0.96	□□□□□ -2.26
SDS22	YKL193C	TRM5	P38793	499 aa		0.96	□□□□□ -2.26
SDS22	YKL193C	YPR174C	Q06616	221 aa	Predicted RBP	0.96	□□□□□ -2.26
SDS22	YKL193C	MDM32	Q12171	622 aa		0.96	□□□□□ -2.26
SDS22	YKL193C	ARG80	P07249	177 aa		0.95	□□□□□ -2.26
SDS22	YKL193C	TAF14	P35189	244 aa		0.95	□□□□□ -2.26
SDS22	YKL193C	PAN3	P36102	679 aa	Predicted RBP	0.95	□□□□□ -2.26
SDS22	YKL193C	YCR087C-A	P37263	153 aa		0.95	□□□□□ -2.26
SDS22	YKL193C	ERG10	P41338	398 aa	Known RBP	0.95	□□□□□ -2.26
SDS22	YKL193C	YFH7	P43591	353 aa		0.95	□□□□□ -2.26
SDS22	YKL193C	RPL37B	P51402	88 aa	Known RBP	0.95	□□□□□ -2.26
SDS22	YKL193C	YMR252C	Q04814	134 aa		0.95	□□□□□ -2.26
SDS22	YKL193C	GGA1	Q06336	557 aa		0.95	□□□□□ -2.26
SDS22	YKL193C	AIM25	P47140	327 aa		0.94	□□□□□ -2.26
SDS22	YKL193C	YHL018W	P38744	120 aa	Predicted RBP	0.93	□□□□□ -2.26
SDS22	YKL193C	GET1	P53192	235 aa		0.93	□□□□□ -2.26
SDS22	YKL193C	YCL042W	P25572	119 aa		0.92	□□□□□ -2.26
SDS22	YKL193C	YCR090C	P25654	182 aa	Known RBP	0.92	□□□□□ -2.26
SDS22	YKL193C	IKI1	P38874	309 aa		0.92	□□□□□ -2.26
SDS22	YKL193C	YEL008W	P40001	126 aa		0.92	□□□□□ -2.26
SDS22	YKL193C	RFA3	P26755	122 aa	Known RBP	0.91	□□□□□ -2.26
SDS22	YKL193C	YEA4	P40004	342 aa		0.91	□□□□□ -2.26
SDS22	YKL193C	GCN20	P43535	752 aa	Known RBP	0.91	□□□□□ -2.26
SDS22	YKL193C	DAD4	P69851	72 aa		0.91	□□□□□ -2.26
SDS22	YKL193C	IRC23	Q08416	157 aa		0.91	□□□□□ -2.26
SDS22	YKL193C	CNB1	P25296	175 aa		0.9	□□□□□ -2.27
SDS22	YKL193C	ECM4	P36156	370 aa		0.9	□□□□□ -2.27
SDS22	YKL193C	HPA3	P39979	161 aa		0.9	□□□□□ -2.27
SDS22	YKL193C	AIM36	Q03798	255 aa		0.9	□□□□□ -2.27
SDS22	YKL193C	RNH202	Q05635	350 aa		0.9	□□□□□ -2.27
SDS22	YKL193C	PRP11	Q07350	266 aa	Predicted RBP	0.9	□□□□□ -2.27
SDS22	YKL193C	GIS3	Q12418	502 aa		0.9	□□□□□ -2.27
SDS22	YKL193C	COX8	P04039	78 aa		0.89	□□□□□ -2.27
SDS22	YKL193C	PHO85	P17157	305 aa		0.89	□□□□□ -2.27
SDS22	YKL193C	SER2	P42941	309 aa		0.89	□□□□□ -2.27
SDS22	YKL193C	SKI6	P46948	246 aa	Predicted RBP	0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms