RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C YVH1Q02256 364 aaKnown RBP1.83□□□□□ -2.12
UFD4YKL010C STD1Q02794 444 aa1.83□□□□□ -2.12
UFD4YKL010C TPP1Q03796 238 aa1.83□□□□□ -2.12
UFD4YKL010C YPR098CQ06089 161 aa1.83□□□□□ -2.12
UFD4YKL010C HMS1Q12398 434 aa1.83□□□□□ -2.12
UFD4YKL010C HUT1Q12520 339 aa1.83□□□□□ -2.12
UFD4YKL010C RPL30P14120 105 aaKnown RBP1.82□□□□□ -2.12
UFD4YKL010C ERG3P32353 365 aa1.82□□□□□ -2.12
UFD4YKL010C YIR035CP40579 254 aa1.82□□□□□ -2.12
UFD4YKL010C PUS4P48567 403 aaKnown RBP1.82□□□□□ -2.12
UFD4YKL010C AVT4P50944 713 aa1.82□□□□□ -2.12
UFD4YKL010C YGR050CP53231 118 aa1.82□□□□□ -2.12
UFD4YKL010C PEF1P53238 335 aa1.82□□□□□ -2.12
UFD4YKL010C PBP1P53297 722 aaKnown RBP1.82□□□□□ -2.12
UFD4YKL010C CUE4Q04201 117 aaPredicted RBP1.82□□□□□ -2.12
UFD4YKL010C YDL242WQ07746 117 aa1.82□□□□□ -2.12
UFD4YKL010C RAX2Q12465 1220 aa1.82□□□□□ -2.12
UFD4YKL010C FAS1P07149 2051 aaKnown RBP1.82□□□□□ -2.12
UFD4YKL010C CYC3P06182 269 aa1.82□□□□□ -2.12
UFD4YKL010C BGL2P15703 313 aaKnown RBP1.82□□□□□ -2.12
UFD4YKL010C QCR9P22289 66 aa1.82□□□□□ -2.12
UFD4YKL010C LSB5P25369 354 aa1.82□□□□□ -2.12
UFD4YKL010C SEF1P34228 1148 aa1.82□□□□□ -2.12
UFD4YKL010C OM14P38325 134 aa1.82□□□□□ -2.12
UFD4YKL010C YND1P40009 630 aa1.82□□□□□ -2.12
UFD4YKL010C RFC2P40348 353 aa1.82□□□□□ -2.12
UFD4YKL010C CFD1P40558 293 aa1.82□□□□□ -2.12
UFD4YKL010C VMA21P41806 77 aa1.82□□□□□ -2.12
UFD4YKL010C YGL262WP53054 175 aa1.82□□□□□ -2.12
UFD4YKL010C PKP2P53170 491 aa1.82□□□□□ -2.12
UFD4YKL010C YGR026WP53217 278 aa1.82□□□□□ -2.12
UFD4YKL010C YNR066CP53752 436 aa1.82□□□□□ -2.12
UFD4YKL010C YDR209CQ03480 137 aa1.82□□□□□ -2.12
UFD4YKL010C CGI121Q03705 181 aaKnown RBP1.82□□□□□ -2.12
UFD4YKL010C YML018CQ03730 393 aa1.82□□□□□ -2.12
UFD4YKL010C CRR1Q05790 422 aa1.82□□□□□ -2.12
UFD4YKL010C FRQ1Q06389 190 aa1.82□□□□□ -2.12
UFD4YKL010C MCH1Q07376 486 aa1.82□□□□□ -2.12
UFD4YKL010C ZEO1Q08245 113 aa1.82□□□□□ -2.12
UFD4YKL010C AKR2Q12013 749 aa1.82□□□□□ -2.12
UFD4YKL010C CBP6P07253 162 aaPredicted RBP1.82□□□□□ -2.12
UFD4YKL010C ARF1P11076 181 aaKnown RBP1.82□□□□□ -2.12
UFD4YKL010C MRPL39P36533 70 aa1.82□□□□□ -2.12
UFD4YKL010C PRS2P38620 318 aaKnown RBP1.82□□□□□ -2.12
UFD4YKL010C SRP14P38985 146 aa1.82□□□□□ -2.12
UFD4YKL010C PAU5P43575 122 aa1.82□□□□□ -2.12
UFD4YKL010C GNA1P43577 159 aaPredicted RBP1.82□□□□□ -2.12
UFD4YKL010C YJR056CP47115 236 aa1.82□□□□□ -2.12
UFD4YKL010C UBP8P50102 471 aa1.82□□□□□ -2.12
UFD4YKL010C ARG5,6Q01217 863 aa1.82□□□□□ -2.12
UFD4YKL010C RCE1Q03530 315 aa1.82□□□□□ -2.12
UFD4YKL010C HOF1Q05080 669 aa1.82□□□□□ -2.12
UFD4YKL010C YOR352WQ08816 343 aa1.82□□□□□ -2.12
UFD4YKL010C YOR376WQ08900 122 aa1.82□□□□□ -2.12
UFD4YKL010C WHI5Q12416 295 aa1.82□□□□□ -2.12
UFD4YKL010C CSF1Q12150 2958 aa1.82□□□□□ -2.12
UFD4YKL010C ILV5P06168 395 aaKnown RBP1.81□□□□□ -2.12
UFD4YKL010C PET494P07390 489 aaPredicted RBP1.81□□□□□ -2.12
UFD4YKL010C VMA16P23968 213 aa1.81□□□□□ -2.12
UFD4YKL010C SOF1P33750 489 aaKnown RBP1.81□□□□□ -2.12
UFD4YKL010C NTC20P38302 140 aaPredicted RBP1.81□□□□□ -2.12
UFD4YKL010C FYV4P38783 130 aaPredicted RBP1.81□□□□□ -2.12
UFD4YKL010C PHB1P40961 287 aa1.81□□□□□ -2.12
UFD4YKL010C MCM22P47167 239 aa1.81□□□□□ -2.12
UFD4YKL010C RIB4P50861 169 aaPredicted RBP1.81□□□□□ -2.12
UFD4YKL010C CYT2Q00873 224 aa1.81□□□□□ -2.12
UFD4YKL010C YMR254CQ04838 102 aa1.81□□□□□ -2.12
UFD4YKL010C RAD28Q12021 506 aa1.81□□□□□ -2.12
UFD4YKL010C FYV7Q12247 151 aa1.81□□□□□ -2.12
UFD4YKL010C TFB5Q3E7C1 72 aaPredicted RBP1.81□□□□□ -2.12
UFD4YKL010C YAL064W-BO13512 126 aa1.81□□□□□ -2.12
UFD4YKL010C PDX1P16451 410 aa1.81□□□□□ -2.12
UFD4YKL010C ROX3P25046 220 aa1.81□□□□□ -2.12
UFD4YKL010C MTC6P38849 526 aa1.81□□□□□ -2.12
UFD4YKL010C CYB5P40312 120 aa1.81□□□□□ -2.12
UFD4YKL010C LOC1P43586 204 aaPredicted RBP1.81□□□□□ -2.12
UFD4YKL010C ATG27P46989 271 aa1.81□□□□□ -2.12
UFD4YKL010C YJR011CP47086 261 aaPredicted RBP1.81□□□□□ -2.12
UFD4YKL010C MOG1P47123 218 aa1.81□□□□□ -2.12
UFD4YKL010C DIG2Q03373 323 aaKnown RBP1.81□□□□□ -2.12
UFD4YKL010C RRS1Q08746 203 aaKnown RBP1.81□□□□□ -2.12
UFD4YKL010C YGL258W-AQ3E740 77 aa1.81□□□□□ -2.12
UFD4YKL010C VPS63O13549 108 aa1.81□□□□□ -2.12
UFD4YKL010C RPL7AP05737 244 aaKnown RBP1.81□□□□□ -2.12
UFD4YKL010C YHR214C-DP0CX93 97 aa1.81□□□□□ -2.12
UFD4YKL010C STE18P18852 110 aa1.81□□□□□ -2.12
UFD4YKL010C SEC62P21825 274 aa1.81□□□□□ -2.12
UFD4YKL010C LDB16P25587 256 aa1.81□□□□□ -2.12
UFD4YKL010C SCM4P32564 187 aa1.81□□□□□ -2.12
UFD4YKL010C GLC7P32598 312 aaKnown RBP1.81□□□□□ -2.12
UFD4YKL010C ECM18Q04623 453 aa1.81□□□□□ -2.12
UFD4YKL010C NDE2Q07500 545 aa1.81□□□□□ -2.12
UFD4YKL010C RRT7Q07829 113 aa1.81□□□□□ -2.12
UFD4YKL010C RPL7BQ12213 244 aaKnown RBP1.81□□□□□ -2.12
UFD4YKL010C YPR071WQ12346 211 aa1.81□□□□□ -2.12
UFD4YKL010C YJR112W-AQ3E743 109 aa1.81□□□□□ -2.12
UFD4YKL010C CKA1P15790 372 aa1.81□□□□□ -2.12
UFD4YKL010C RPB3P16370 318 aaKnown RBP1.81□□□□□ -2.12
UFD4YKL010C CWP1P28319 239 aa1.81□□□□□ -2.12
UFD4YKL010C YBL059WP34224 193 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms