RNA–Protein interactions for RNA: YJL097W

PHS1, Transcript of Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane, yeast

Gene PHS1, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHS1	YJL097W	POL30	P15873	258 aa	Known RBP	0.84	□□□□□ -2.27
PHS1	YJL097W	GRX2	P17695	143 aa	Known RBP	0.84	□□□□□ -2.27
PHS1	YJL097W	EHD3	P28817	500 aa		0.84	□□□□□ -2.27
PHS1	YJL097W	HOM6	P31116	359 aa	Known RBP	0.84	□□□□□ -2.27
PHS1	YJL097W	UPS2	P35200	230 aa		0.84	□□□□□ -2.27
PHS1	YJL097W	YIL001W	P40560	513 aa		0.84	□□□□□ -2.27
PHS1	YJL097W	YJR056C	P47115	236 aa		0.84	□□□□□ -2.27
PHS1	YJL097W	USE1	P53146	245 aa		0.84	□□□□□ -2.27
PHS1	YJL097W	TOS8	P53147	276 aa		0.84	□□□□□ -2.27
PHS1	YJL097W	SNZ2	P53824	298 aa		0.84	□□□□□ -2.27
PHS1	YJL097W	NUP49	Q02199	472 aa		0.84	□□□□□ -2.27
PHS1	YJL097W	RRS1	Q08746	203 aa	Known RBP	0.84	□□□□□ -2.27
PHS1	YJL097W	YPL257W	Q08974	193 aa		0.84	□□□□□ -2.27
PHS1	YJL097W	MSW1	P04803	379 aa		0.83	□□□□□ -2.28
PHS1	YJL097W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
PHS1	YJL097W	YBR219C	P38317	127 aa		0.83	□□□□□ -2.28
PHS1	YJL097W	GOS1	P38736	223 aa		0.83	□□□□□ -2.28
PHS1	YJL097W	GLE2	P40066	365 aa		0.83	□□□□□ -2.28
PHS1	YJL097W	RPL13B	P40212	199 aa	Known RBP	0.83	□□□□□ -2.28
PHS1	YJL097W	MEP1	P40260	492 aa		0.83	□□□□□ -2.28
PHS1	YJL097W	MPP6	P53725	186 aa	Predicted RBP	0.83	□□□□□ -2.28
PHS1	YJL097W	GRX8	Q05926	109 aa		0.83	□□□□□ -2.28
PHS1	YJL097W	HEM25	Q07534	307 aa		0.83	□□□□□ -2.28
PHS1	YJL097W	CSI2	Q08054	341 aa		0.83	□□□□□ -2.28
PHS1	YJL097W	YLR046C	Q12253	270 aa		0.83	□□□□□ -2.28
PHS1	YJL097W	SNU23	Q12368	194 aa	Predicted RBP	0.83	□□□□□ -2.28
PHS1	YJL097W	RPL13A	Q12690	199 aa	Predicted RBP	0.83	□□□□□ -2.28
PHS1	YJL097W	RPL2A	P0CX45	254 aa	Known RBP	0.82	□□□□□ -2.28
PHS1	YJL097W	RPL2B	P0CX46	254 aa	Known RBP	0.82	□□□□□ -2.28
PHS1	YJL097W	MAK31	P23059	88 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	RNA15	P25299	296 aa	Predicted RBP	0.82	□□□□□ -2.28
PHS1	YJL097W	AUA1	P32450	94 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	YPT52	P36018	234 aa	Known RBP	0.82	□□□□□ -2.28
PHS1	YJL097W	MRPL15	P36523	253 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	YBR096W	P38256	230 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	RPF1	P38805	295 aa	Known RBP	0.82	□□□□□ -2.28
PHS1	YJL097W	PRE6	P40303	254 aa	Known RBP	0.82	□□□□□ -2.28
PHS1	YJL097W	GLG2	P47011	380 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	HAM1	P47119	197 aa	Known RBP	0.82	□□□□□ -2.28
PHS1	YJL097W	YNR062C	P53748	327 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
PHS1	YJL097W	RHO3	Q00245	231 aa	Known RBP	0.82	□□□□□ -2.28
PHS1	YJL097W	SML1	Q04964	104 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	ATG39	Q06159	398 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	YLR162W	Q06235	118 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	CSM4	Q08955	156 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	BTS1	Q12051	335 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	MDM32	Q12171	622 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	RIO1	Q12196	484 aa	Known RBP	0.82	□□□□□ -2.28
PHS1	YJL097W	YCT1	Q12235	531 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	HTL1	Q9URQ5	78 aa		0.82	□□□□□ -2.28
PHS1	YJL097W	PET9	P18239	318 aa	Known RBP	0.81	□□□□□ -2.28
PHS1	YJL097W	BIG1	P38813	335 aa		0.81	□□□□□ -2.28
PHS1	YJL097W	YHR180W	P38868	163 aa		0.81	□□□□□ -2.28
PHS1	YJL097W	GAA1	P39012	614 aa		0.81	□□□□□ -2.28
PHS1	YJL097W	YAR068W	P39564	161 aa		0.81	□□□□□ -2.28
PHS1	YJL097W	CUP9	P41817	306 aa		0.81	□□□□□ -2.28
PHS1	YJL097W	RPA43	P46669	326 aa		0.81	□□□□□ -2.28
PHS1	YJL097W	YNL046W	P53956	172 aa		0.81	□□□□□ -2.28
PHS1	YJL097W	YOR020W-A	Q3E824	90 aa		0.81	□□□□□ -2.28
PHS1	YJL097W	RSR1	P13856	272 aa		0.8	□□□□□ -2.28
PHS1	YJL097W	ERD2	P18414	219 aa		0.8	□□□□□ -2.28
PHS1	YJL097W	MEI4	P29467	408 aa		0.8	□□□□□ -2.28
PHS1	YJL097W	YHR127W	P38833	243 aa	Known RBP	0.8	□□□□□ -2.28
PHS1	YJL097W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
PHS1	YJL097W	RTT105	P40063	208 aa		0.8	□□□□□ -2.28
PHS1	YJL097W	YMR144W	P40214	342 aa	Known RBP	0.8	□□□□□ -2.28
PHS1	YJL097W	ICE2	P40499	491 aa		0.8	□□□□□ -2.28
PHS1	YJL097W	ILM1	P47155	203 aa		0.8	□□□□□ -2.28
PHS1	YJL097W	DID2	P69771	204 aa		0.8	□□□□□ -2.28
PHS1	YJL097W	SDO1	Q07953	250 aa	Known RBP	0.8	□□□□□ -2.28
PHS1	YJL097W	CPA1	P07258	411 aa	Known RBP	0.79	□□□□□ -2.28
PHS1	YJL097W	FCY2	P17064	533 aa		0.79	□□□□□ -2.28
PHS1	YJL097W	YKL075C	P36083	450 aa		0.79	□□□□□ -2.28
PHS1	YJL097W	ECM33	P38248	429 aa	Known RBP	0.79	□□□□□ -2.28
PHS1	YJL097W	TIR3	P40552	269 aa		0.79	□□□□□ -2.28
PHS1	YJL097W	RPL33B	P41056	107 aa	Known RBP	0.79	□□□□□ -2.28
PHS1	YJL097W	ABF2	Q02486	183 aa		0.79	□□□□□ -2.28
PHS1	YJL097W	YML108W	Q03759	105 aa		0.79	□□□□□ -2.28
PHS1	YJL097W	YOL107W	Q12239	342 aa		0.79	□□□□□ -2.28
PHS1	YJL097W	YGR035W-A	Q45U48	73 aa		0.79	□□□□□ -2.28
PHS1	YJL097W	GPA2	P10823	449 aa		0.78	□□□□□ -2.28
PHS1	YJL097W	TCP1	P12612	559 aa	Known RBP	0.78	□□□□□ -2.28
PHS1	YJL097W	TMA19	P35691	167 aa	Known RBP	0.78	□□□□□ -2.28
PHS1	YJL097W	YHL037C	P38733	133 aa		0.78	□□□□□ -2.28
PHS1	YJL097W	GAT4	P40569	121 aa		0.78	□□□□□ -2.28
PHS1	YJL097W	CAT5	P41735	233 aa		0.78	□□□□□ -2.28
PHS1	YJL097W	YFL051C	P43552	160 aa		0.78	□□□□□ -2.28
PHS1	YJL097W	ERV29	P53337	310 aa		0.78	□□□□□ -2.28
PHS1	YJL097W	SSQ1	Q05931	657 aa	Predicted RBP	0.78	□□□□□ -2.28
PHS1	YJL097W	SEI1	Q06058	285 aa		0.78	□□□□□ -2.28
PHS1	YJL097W	YLR036C	Q07986	203 aa		0.78	□□□□□ -2.28
PHS1	YJL097W	NIP7	Q08962	181 aa	Known RBP	0.78	□□□□□ -2.28
PHS1	YJL097W	MSH5	Q12175	901 aa		0.78	□□□□□ -2.28
PHS1	YJL097W	CDC8	P00572	216 aa		0.77	□□□□□ -2.29
PHS1	YJL097W	RPS5	P26783	225 aa	Known RBP	0.77	□□□□□ -2.29
PHS1	YJL097W	RIB7	P33312	244 aa		0.77	□□□□□ -2.29
PHS1	YJL097W	KDX1	P36005	433 aa		0.77	□□□□□ -2.29
PHS1	YJL097W	YBR063C	P38083	404 aa		0.77	□□□□□ -2.29
PHS1	YJL097W	SIP3	P38717	1229 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms