RNA–Protein interactions for RNA: YGR215W

RSM27, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM27, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM27	YGR215W	PBN1	P25580	416 aa		1.22	□□□□□ -2.21
RSM27	YGR215W	MGM101	P32787	269 aa	Known RBP	1.22	□□□□□ -2.21
RSM27	YGR215W	RPL37A	P49166	88 aa	Known RBP	1.22	□□□□□ -2.21
RSM27	YGR215W	PDR17	P53844	350 aa		1.22	□□□□□ -2.21
RSM27	YGR215W	CUE4	Q04201	117 aa	Predicted RBP	1.22	□□□□□ -2.21
RSM27	YGR215W	YDR157W	A0A023PZE8	133 aa		1.21	□□□□□ -2.22
RSM27	YGR215W	STE18	P18852	110 aa		1.21	□□□□□ -2.22
RSM27	YGR215W	ATP15	P21306	62 aa		1.21	□□□□□ -2.22
RSM27	YGR215W	SPS18	P32572	300 aa		1.21	□□□□□ -2.22
RSM27	YGR215W	PRP18	P33411	251 aa	Predicted RBP	1.21	□□□□□ -2.22
RSM27	YGR215W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	1.21	□□□□□ -2.22	not detected
RSM27	YGR215W	VMA22	P38784	181 aa		1.21	□□□□□ -2.22
RSM27	YGR215W	YOL160W	Q08321	113 aa		1.21	□□□□□ -2.22
RSM27	YGR215W	RPL27A	P0C2H6	136 aa	Known RBP	1.2	□□□□□ -2.22
RSM27	YGR215W	SEC11	P15367	167 aa		1.2	□□□□□ -2.22
RSM27	YGR215W	RPB3	P16370	318 aa	Known RBP	1.2	□□□□□ -2.22
RSM27	YGR215W	COQ1	P18900	473 aa		1.2	□□□□□ -2.22
RSM27	YGR215W	OPY1	P38271	328 aa		1.2	□□□□□ -2.22
RSM27	YGR215W	YRB1	P41920	201 aa	Known RBP	1.2	□□□□□ -2.22
RSM27	YGR215W	RAD17	P48581	401 aa		1.2	□□□□□ -2.22
RSM27	YGR215W	RPL25	P04456	142 aa	Known RBP	1.19	□□□□□ -2.22
RSM27	YGR215W	AQY2	P0CD90	149 aa		1.19	□□□□□ -2.22
RSM27	YGR215W	MER1	P16523	270 aa		1.19	□□□□□ -2.22
RSM27	YGR215W	TVP23	P38962	199 aa		1.19	□□□□□ -2.22
RSM27	YGR215W	CWC23	P52868	283 aa	Predicted RBP	1.19	□□□□□ -2.22
RSM27	YGR215W	LSM7	P53905	115 aa	Known RBP	1.19	□□□□□ -2.22
RSM27	YGR215W	CDC33	P07260	213 aa	Known RBP	1.18	□□□□□ -2.22
RSM27	YGR215W	YEL067C	P39978	195 aa		1.18	□□□□□ -2.22
RSM27	YGR215W	IRC18	P47056	224 aa		1.18	□□□□□ -2.22
RSM27	YGR215W	ARG80	P07249	177 aa		1.17	□□□□□ -2.22
RSM27	YGR215W	NSP1	P14907	823 aa	Known RBP	1.17	□□□□□ -2.22
RSM27	YGR215W	CKS1	P20486	150 aa	Known RBP	1.17	□□□□□ -2.22
RSM27	YGR215W	MSS2	P40990	351 aa		1.17	□□□□□ -2.22
RSM27	YGR215W	COG5	P53951	403 aa		1.17	□□□□□ -2.22
RSM27	YGR215W	YHR007C-A	Q07074	71 aa		1.17	□□□□□ -2.22
RSM27	YGR215W	MDM32	Q12171	622 aa		1.17	□□□□□ -2.22
RSM27	YGR215W	MAG1	P22134	296 aa	Known RBP	1.16	□□□□□ -2.22
RSM27	YGR215W	YPL073C	P40323	161 aa		1.16	□□□□□ -2.22
RSM27	YGR215W	ARO8	P53090	500 aa	Known RBP	1.16	□□□□□ -2.22
RSM27	YGR215W	MPC3	P53311	146 aa		1.16	□□□□□ -2.22
RSM27	YGR215W	RCE1	Q03530	315 aa		1.16	□□□□□ -2.22
RSM27	YGR215W	TRM5	P38793	499 aa		1.15	□□□□□ -2.23
RSM27	YGR215W	SOK1	P40317	901 aa		1.15	□□□□□ -2.23
RSM27	YGR215W	AIM25	P47140	327 aa		1.15	□□□□□ -2.23
RSM27	YGR215W	YNG1	Q08465	219 aa		1.15	□□□□□ -2.23
RSM27	YGR215W	FAS1	P07149	2051 aa	Known RBP	1.15	□□□□□ -2.23
RSM27	YGR215W	IKI3	Q06706	1349 aa	Known RBP	1.15	□□□□□ -2.23
RSM27	YGR215W	YHR212W-A	P0CX91	67 aa		1.14	□□□□□ -2.23
RSM27	YGR215W	KDX1	P36005	433 aa		1.14	□□□□□ -2.23
RSM27	YGR215W	HMF1	P40037	129 aa	Known RBP	1.14	□□□□□ -2.23
RSM27	YGR215W	HUA1	P40325	198 aa		1.14	□□□□□ -2.23
RSM27	YGR215W	FLX1	P40464	311 aa		1.14	□□□□□ -2.23
RSM27	YGR215W	YAE1	P47118	141 aa	Predicted RBP	1.14	□□□□□ -2.23
RSM27	YGR215W	HNT1	Q04344	158 aa	Known RBP	1.14	□□□□□ -2.23
RSM27	YGR215W	GIS3	Q12418	502 aa		1.14	□□□□□ -2.23
RSM27	YGR215W	POR1	P04840	283 aa	Known RBP	1.13	□□□□□ -2.23
RSM27	YGR215W	SPO13	P23624	291 aa		1.13	□□□□□ -2.23
RSM27	YGR215W	YCR087C-A	P37263	153 aa		1.13	□□□□□ -2.23
RSM27	YGR215W	YPR174C	Q06616	221 aa	Predicted RBP	1.13	□□□□□ -2.23
RSM27	YGR215W	NCB2	Q92317	146 aa		1.13	□□□□□ -2.23
RSM27	YGR215W	TAF14	P35189	244 aa		1.12	□□□□□ -2.23
RSM27	YGR215W	YER034W	P40022	185 aa	Known RBP	1.12	□□□□□ -2.23
RSM27	YGR215W	YNL247W	P53852	767 aa	Known RBP	1.12	□□□□□ -2.23
RSM27	YGR215W	YRA1	Q12159	226 aa	Known RBP	1.12	□□□□□ -2.23
RSM27	YGR215W	SLH1	P53327	1967 aa	Known RBP	1.12	□□□□□ -2.23
RSM27	YGR215W	EDC3	P39998	551 aa	Known RBP	1.11	□□□□□ -2.23
RSM27	YGR215W	DGA1	Q08650	418 aa		1.11	□□□□□ -2.23
RSM27	YGR215W	MDM35	O60200	86 aa		1.1	□□□□□ -2.23
RSM27	YGR215W	PAN3	P36102	679 aa	Predicted RBP	1.1	□□□□□ -2.23
RSM27	YGR215W	IKI1	P38874	309 aa		1.1	□□□□□ -2.23
RSM27	YGR215W	HYR1	P40581	163 aa	Known RBP	1.1	□□□□□ -2.23
RSM27	YGR215W	YFL065C	P43539	102 aa		1.1	□□□□□ -2.23
RSM27	YGR215W	GET1	P53192	235 aa		1.1	□□□□□ -2.23
RSM27	YGR215W	CWC27	Q02770	301 aa		1.1	□□□□□ -2.23
RSM27	YGR215W	ODC2	Q99297	307 aa		1.1	□□□□□ -2.23
RSM27	YGR215W	RFA3	P26755	122 aa	Known RBP	1.09	□□□□□ -2.23
RSM27	YGR215W	OCH1	P31755	480 aa		1.09	□□□□□ -2.23
RSM27	YGR215W	YMR007W	Q03675	126 aa		1.09	□□□□□ -2.23
RSM27	YGR215W	BNA7	Q04066	261 aa		1.09	□□□□□ -2.23
RSM27	YGR215W	YCL042W	P25572	119 aa		1.08	□□□□□ -2.24
RSM27	YGR215W	YCR090C	P25654	182 aa	Known RBP	1.08	□□□□□ -2.24
RSM27	YGR215W	ERG10	P41338	398 aa	Known RBP	1.08	□□□□□ -2.24
RSM27	YGR215W	RPL37B	P51402	88 aa	Known RBP	1.08	□□□□□ -2.24
RSM27	YGR215W	PGA2	P53903	129 aa		1.08	□□□□□ -2.24
RSM27	YGR215W	RUD3	Q12234	484 aa	Known RBP	1.08	□□□□□ -2.24
RSM27	YGR215W	HTB1	P02293	131 aa	Known RBP	1.07	□□□□□ -2.24
RSM27	YGR215W	HTB2	P02294	131 aa		1.07	□□□□□ -2.24
RSM27	YGR215W	YHL042W	P38729	150 aa		1.07	□□□□□ -2.24
RSM27	YGR215W	YEA4	P40004	342 aa		1.07	□□□□□ -2.24
RSM27	YGR215W	YMR099C	Q03161	297 aa	Known RBP	1.07	□□□□□ -2.24
RSM27	YGR215W	GGA1	Q06336	557 aa		1.07	□□□□□ -2.24
RSM27	YGR215W	ECM4	P36156	370 aa		1.06	□□□□□ -2.24
RSM27	YGR215W	YHL018W	P38744	120 aa	Predicted RBP	1.06	□□□□□ -2.24
RSM27	YGR215W	GCN20	P43535	752 aa	Known RBP	1.06	□□□□□ -2.24
RSM27	YGR215W	YFH7	P43591	353 aa		1.06	□□□□□ -2.24
RSM27	YGR215W	IRC23	Q08416	157 aa		1.06	□□□□□ -2.24
RSM27	YGR215W	YEL008W	P40001	126 aa		1.05	□□□□□ -2.24
RSM27	YGR215W	RNH1	Q04740	348 aa		1.05	□□□□□ -2.24
RSM27	YGR215W	YMR252C	Q04814	134 aa		1.05	□□□□□ -2.24
RSM27	YGR215W	FIT2	Q08906	153 aa		1.05	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms