RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C PRS2P38620 318 aaKnown RBP3.04□□□□□ -1.92
TRS120YDR407C FYV4P38783 130 aaPredicted RBP3.04□□□□□ -1.92
TRS120YDR407C YPS6P40583 537 aa3.04□□□□□ -1.92
TRS120YDR407C YVH1Q02256 364 aaKnown RBP3.04□□□□□ -1.92
TRS120YDR407C YML018CQ03730 393 aa3.04□□□□□ -1.92
TRS120YDR407C RBS1Q05672 457 aaKnown RBP3.04□□□□□ -1.92
TRS120YDR407C YOL029CQ08187 201 aa3.04□□□□□ -1.92
TRS120YDR407C YOL118CQ08259 102 aa3.04□□□□□ -1.92
TRS120YDR407C HUG1Q6Q5K6 68 aa3.04□□□□□ -1.92
TRS120YDR407C CFD1P40558 293 aa3.04□□□□□ -1.92
TRS120YDR407C YJL213WP40896 331 aa3.04□□□□□ -1.92
TRS120YDR407C LST7P53237 242 aa3.04□□□□□ -1.92
TRS120YDR407C TDA6Q06466 467 aa3.04□□□□□ -1.92
TRS120YDR407C HRD1Q08109 551 aa3.04□□□□□ -1.92
TRS120YDR407C CYC3P06182 269 aa3.03□□□□□ -1.92
TRS120YDR407C LSM4P40070 187 aaKnown RBP3.03□□□□□ -1.92
TRS120YDR407C HNT2P49775 206 aa3.03□□□□□ -1.92
TRS120YDR407C AVT4P50944 713 aa3.03□□□□□ -1.92
TRS120YDR407C CRH1P53301 507 aa3.03□□□□□ -1.92
TRS120YDR407C NIS1P53939 407 aa3.03□□□□□ -1.92
TRS120YDR407C NDE2Q07500 545 aa3.03□□□□□ -1.92
TRS120YDR407C FYV7Q12247 151 aa3.03□□□□□ -1.92
TRS120YDR407C ROX3P25046 220 aa3.03□□□□□ -1.92
TRS120YDR407C QRI5P32344 111 aa3.03□□□□□ -1.92
TRS120YDR407C SEF1P34228 1148 aa3.03□□□□□ -1.92
TRS120YDR407C UPS1Q05776 175 aa3.03□□□□□ -1.92
TRS120YDR407C COX5BP00425 151 aa3.03□□□□□ -1.92
TRS120YDR407C RPL31AP0C2H8 113 aaKnown RBP3.03□□□□□ -1.92
TRS120YDR407C RPL31BP0C2H9 113 aaKnown RBP3.03□□□□□ -1.92
TRS120YDR407C RPL30P14120 105 aaKnown RBP3.03□□□□□ -1.92
TRS120YDR407C PDR16P53860 351 aaKnown RBP3.03□□□□□ -1.92
TRS120YDR407C YPL039WQ03080 316 aa3.03□□□□□ -1.92
TRS120YDR407C YDR444WQ04093 687 aa3.03□□□□□ -1.92
TRS120YDR407C YPT1P01123 206 aaKnown RBP3.02□□□□□ -1.93
TRS120YDR407C ATP5P09457 212 aa3.02□□□□□ -1.93
TRS120YDR407C QCR9P22289 66 aa3.02□□□□□ -1.93
TRS120YDR407C GLC7P32598 312 aaKnown RBP3.02□□□□□ -1.93
TRS120YDR407C SOF1P33750 489 aaKnown RBP3.02□□□□□ -1.93
TRS120YDR407C SHO1P40073 367 aa3.02□□□□□ -1.93
TRS120YDR407C OST3P48439 350 aa3.02□□□□□ -1.93
TRS120YDR407C RIB4P50861 169 aaPredicted RBP3.02□□□□□ -1.93
TRS120YDR407C SUT1P53032 299 aaKnown RBP3.02□□□□□ -1.93
TRS120YDR407C YNR040WP53736 256 aa3.02□□□□□ -1.93
TRS120YDR407C YNR066CP53752 436 aa3.02□□□□□ -1.93
TRS120YDR407C RSM23Q01163 450 aa3.02□□□□□ -1.93
TRS120YDR407C VPS28Q02767 242 aa3.02□□□□□ -1.93
TRS120YDR407C ADD37Q03233 198 aa3.02□□□□□ -1.93
TRS120YDR407C RCE1Q03530 315 aa3.02□□□□□ -1.93
TRS120YDR407C GAT3Q07928 141 aa3.02□□□□□ -1.93
TRS120YDR407C PDX1P16451 410 aa3.02□□□□□ -1.93
TRS120YDR407C SNF5P18480 905 aa3.02□□□□□ -1.93
TRS120YDR407C SNO3P43544 222 aa3.02□□□□□ -1.93
TRS120YDR407C ARP3P47117 449 aaKnown RBP3.02□□□□□ -1.93
TRS120YDR407C ATG4P53867 494 aa3.02□□□□□ -1.93
TRS120YDR407C ERG27Q12452 347 aaKnown RBP3.02□□□□□ -1.93
TRS120YDR407C PAU1P0CE88 120 aa3.02□□□□□ -1.93
TRS120YDR407C PAU14P0CE89 120 aa3.02□□□□□ -1.93
TRS120YDR407C PAU6P0CE90 120 aa3.02□□□□□ -1.93
TRS120YDR407C PAU18P0CE91 120 aa3.02□□□□□ -1.93
TRS120YDR407C PAU8P0CE92 120 aa3.02□□□□□ -1.93
TRS120YDR407C PAU11P0CE93 120 aa3.02□□□□□ -1.93
TRS120YDR407C KRR1P25586 316 aaPredicted RBP3.02□□□□□ -1.93
TRS120YDR407C COQ3P27680 312 aa3.02□□□□□ -1.93
TRS120YDR407C YKL187CP34231 750 aa3.02□□□□□ -1.93
TRS120YDR407C YKL107WP34251 309 aa3.02□□□□□ -1.93
TRS120YDR407C PAU13P38725 120 aa3.02□□□□□ -1.93
TRS120YDR407C YGL114WP53134 725 aa3.02□□□□□ -1.93
TRS120YDR407C YNR048WP53740 393 aa3.02□□□□□ -1.93
TRS120YDR407C PAU10Q03050 120 aa3.02□□□□□ -1.93
TRS120YDR407C IZH1Q03419 316 aa3.02□□□□□ -1.93
TRS120YDR407C YDR209CQ03480 137 aa3.02□□□□□ -1.93
TRS120YDR407C YMR166CQ03829 368 aa3.02□□□□□ -1.93
TRS120YDR407C PAU20Q08322 120 aa3.02□□□□□ -1.93
TRS120YDR407C USB1Q12208 290 aaKnown RBP3.02□□□□□ -1.93
TRS120YDR407C TMA17Q12513 150 aa3.02□□□□□ -1.93
TRS120YDR407C PAU9Q3E770 120 aa3.02□□□□□ -1.93
TRS120YDR407C TDH3P00359 332 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
TRS120YDR407C HOG1P32485 435 aa3.01□□□□□ -1.93
TRS120YDR407C CDC40P40968 455 aaPredicted RBP3.01□□□□□ -1.93
TRS120YDR407C PUS4P48567 403 aaKnown RBP3.01□□□□□ -1.93
TRS120YDR407C PBP1P53297 722 aaKnown RBP3.01□□□□□ -1.93
TRS120YDR407C MCH1Q07376 486 aa3.01□□□□□ -1.93
TRS120YDR407C ZEO1Q08245 113 aa3.01□□□□□ -1.93
TRS120YDR407C AKR2Q12013 749 aa3.01□□□□□ -1.93
TRS120YDR407C ARF1P11076 181 aaKnown RBP3.01□□□□□ -1.93
TRS120YDR407C SPO7P18410 259 aa3.01□□□□□ -1.93
TRS120YDR407C UBS1P38290 277 aa3.01□□□□□ -1.93
TRS120YDR407C SLM1P40485 686 aa3.01□□□□□ -1.93
TRS120YDR407C YIL029CP40538 142 aa3.01□□□□□ -1.93
TRS120YDR407C CUP9P41817 306 aa3.01□□□□□ -1.93
TRS120YDR407C ATP19P81451 68 aa3.01□□□□□ -1.93
TRS120YDR407C DAL4Q04895 635 aa3.01□□□□□ -1.93
TRS120YDR407C YOR376WQ08900 122 aa3.01□□□□□ -1.93
TRS120YDR407C USV1Q12132 391 aa3.01□□□□□ -1.93
TRS120YDR407C TFB5Q3E7C1 72 aaPredicted RBP3.01□□□□□ -1.93
TRS120YDR407C YAL064W-BO13512 126 aa3.01□□□□□ -1.93
TRS120YDR407C MRPS5P33759 307 aa3.01□□□□□ -1.93
TRS120YDR407C MRPL28P36527 147 aa3.01□□□□□ -1.93
TRS120YDR407C PEX7P39108 375 aa3.01□□□□□ -1.93
TRS120YDR407C GLE2P40066 365 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms