RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	TAD3	Q9URQ3	322 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	MAK32	P23060	363 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	CWC27	Q02770	301 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	YLR224W	Q05947	369 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	HRD1	Q08109	551 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.07	□□□□□ -1.76
PDR15	YDR406W	RPB8	P20436	146 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	ATS1	P31386	333 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	ICS2	P38284	255 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	SDS24	P38314	527 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	APS2	Q00381	147 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	SEI1	Q06058	285 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	NCE102	Q12207	173 aa	RIP-Chip data	4.07	□□□□□ -1.76	not detected
PDR15	YDR406W	PET20	Q99373	253 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	MATALPHA1	P0CY06	175 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	HMLALPHA1	P0CY07	175 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	ELO2	P25358	347 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	FRM2	P37261	193 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	TTI2	P47168	421 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	ALG6	Q12001	544 aa	Known RBP	4.07	□□□□□ -1.76
PDR15	YDR406W	SME1	Q12330	94 aa	Predicted RBP	4.07	□□□□□ -1.76
PDR15	YDR406W	ODC2	Q99297	307 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	RPL3	P14126	387 aa	Known RBP	4.07	□□□□□ -1.76
PDR15	YDR406W	HSP150	P32478	413 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	CLB6	P32943	380 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	WSC4	P38739	605 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	RRP4	P38792	359 aa	Known RBP	4.07	□□□□□ -1.76
PDR15	YDR406W	NMA1	Q06178	401 aa	Known RBP	4.07	□□□□□ -1.76
PDR15	YDR406W	SET6	Q12529	373 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	YHR213W-A	Q8TGT4	77 aa		4.07	□□□□□ -1.76
PDR15	YDR406W	HSP12	P22943	109 aa	Known RBP	4.06	□□□□□ -1.76
PDR15	YDR406W	EMP70	P32802	667 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	PDC2	P32896	925 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	PPZ2	P33329	710 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	PEX7	P39108	375 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	DGK1	Q12382	290 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	YOX1	P34161	385 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	DER1	P38307	211 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	PAC2	P39937	518 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	EMC5	P40540	141 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	YFL054C	P43549	646 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	UBC13	P52490	153 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	NIF3	P53081	288 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	YIP4	P53093	235 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	PKR1	Q03880	122 aa	Known RBP	4.06	□□□□□ -1.76
PDR15	YDR406W	THI74	Q04083	370 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	HRI1	Q05905	244 aa	Known RBP	4.06	□□□□□ -1.76
PDR15	YDR406W	RNH203	Q12338	110 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	RPB3	P16370	318 aa	Known RBP	4.06	□□□□□ -1.76
PDR15	YDR406W	YCR006C	P25350	157 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	UPS2	P35200	230 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	PGD1	P40356	397 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	MPA43	P53583	542 aa	Predicted RBP	4.06	□□□□□ -1.76
PDR15	YDR406W	YIP3	P53633	176 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	CRR1	Q05790	422 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	FRQ1	Q06389	190 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	MIM1	Q08176	113 aa		4.06	□□□□□ -1.76
PDR15	YDR406W	CPR3	P25719	182 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	LDS1	P31379	325 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	TIR2	P33890	251 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	QDR3	P38227	689 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	YPC1	P38298	316 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	RPL9B	P51401	191 aa	Known RBP	4.05	□□□□□ -1.76
PDR15	YDR406W	FMP48	P53233	369 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	HTB1	P02293	131 aa	Known RBP	4.05	□□□□□ -1.76
PDR15	YDR406W	HTB2	P02294	131 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	AAC1	P04710	309 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	CTA1	P15202	515 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	VMA5	P31412	392 aa	Known RBP	4.05	□□□□□ -1.76
PDR15	YDR406W	YKL187C	P34231	750 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	UMP1	P38293	148 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	RPB11	P38902	120 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	YFR054C	P43622	192 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	BXI1	P48558	297 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	YMR279C	Q03263	540 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	YML079W	Q03629	201 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	KEI1	Q06346	221 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	MRPL35	Q06678	367 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	POM33	Q12164	279 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	SLH1	P53327	1967 aa	Known RBP	4.05	□□□□□ -1.76
PDR15	YDR406W	ERG24	P32462	438 aa	Known RBP	4.05	□□□□□ -1.76
PDR15	YDR406W	YIR035C	P40579	254 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	MOB2	P43563	287 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	FRE7	Q12333	620 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	YOR343C	Q12484	108 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	COX1	P00401	534 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	REP2	P03872	296 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	RPS23A	P0CX29	145 aa	Known RBP	4.05	□□□□□ -1.76
PDR15	YDR406W	RPS23B	P0CX30	145 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	RPL18A	P0CX49	186 aa	Known RBP	4.05	□□□□□ -1.76
PDR15	YDR406W	RPL18B	P0CX50	186 aa	Known RBP	4.05	□□□□□ -1.76
PDR15	YDR406W	STF2	P16965	84 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	YMR31	P19955	123 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	MNS1	P32906	549 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	SOR1	P35497	357 aa	Known RBP	4.05	□□□□□ -1.76
PDR15	YDR406W	RPP1	P38786	293 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	YNR064C	P53750	290 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	MRPL22	P53881	309 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	SOR2	Q07786	357 aa		4.05	□□□□□ -1.76
PDR15	YDR406W	YPL257W	Q08974	193 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms