RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	YOR186W	Q08560	144 aa		3.24	□□□□□ -1.89
RPB7	YDR404C	YPR011C	Q12251	326 aa		3.24	□□□□□ -1.89
RPB7	YDR404C	SUI1	P32911	108 aa	Known RBP	3.23	□□□□□ -1.89
RPB7	YDR404C	YPT52	P36018	234 aa	Known RBP	3.23	□□□□□ -1.89
RPB7	YDR404C	CWC23	P52868	283 aa	Predicted RBP	3.23	□□□□□ -1.89
RPB7	YDR404C	YNL046W	P53956	172 aa		3.23	□□□□□ -1.89
RPB7	YDR404C	YMR114C	Q04471	368 aa	Known RBP	3.23	□□□□□ -1.89
RPB7	YDR404C	MSA1	Q08471	629 aa		3.23	□□□□□ -1.89
RPB7	YDR404C	ISD11	Q6Q560	94 aa		3.23	□□□□□ -1.89
RPB7	YDR404C	YDR157W	A0A023PZE8	133 aa		3.22	□□□□□ -1.89
RPB7	YDR404C	YEL009C-A	A0A023PZF2	135 aa		3.22	□□□□□ -1.89
RPB7	YDR404C	MAK5	P38112	773 aa	Predicted RBP	3.22	□□□□□ -1.89
RPB7	YDR404C	TEM1	P38987	245 aa		3.22	□□□□□ -1.89
RPB7	YDR404C	YMR144W	P40214	342 aa	Known RBP	3.22	□□□□□ -1.89
RPB7	YDR404C	ALG13	P53178	202 aa		3.22	□□□□□ -1.89
RPB7	YDR404C	ALG9	P53868	555 aa	Known RBP	3.22	□□□□□ -1.89
RPB7	YDR404C	SSQ1	Q05931	657 aa	Predicted RBP	3.22	□□□□□ -1.89
RPB7	YDR404C	YPR174C	Q06616	221 aa	Predicted RBP	3.22	□□□□□ -1.89
RPB7	YDR404C	SMT3	Q12306	101 aa	Known RBP	3.22	□□□□□ -1.89
RPB7	YDR404C	DBF2	P22204	572 aa		3.21	□□□□□ -1.9
RPB7	YDR404C	SSO1	P32867	290 aa		3.21	□□□□□ -1.9
RPB7	YDR404C	AST1	P35183	429 aa		3.21	□□□□□ -1.9
RPB7	YDR404C	YIR035C	P40579	254 aa		3.21	□□□□□ -1.9
RPB7	YDR404C	MCM22	P47167	239 aa		3.21	□□□□□ -1.9
RPB7	YDR404C	YJR149W	P47177	404 aa		3.21	□□□□□ -1.9
RPB7	YDR404C	MIG2	P53035	382 aa		3.21	□□□□□ -1.9
RPB7	YDR404C	CGI121	Q03705	181 aa	Known RBP	3.21	□□□□□ -1.9
RPB7	YDR404C	MIX14	Q04341	121 aa		3.21	□□□□□ -1.9
RPB7	YDR404C	YPL247C	Q12523	523 aa		3.21	□□□□□ -1.9
RPB7	YDR404C	YPL229W	Q99395	206 aa		3.21	□□□□□ -1.9
RPB7	YDR404C	Q0144	Q9ZZW2	109 aa		3.21	□□□□□ -1.9
RPB7	YDR404C	RPL28	P02406	149 aa	Known RBP	3.2	□□□□□ -1.9
RPB7	YDR404C	SPT3	P06844	337 aa		3.2	□□□□□ -1.9
RPB7	YDR404C	ERD2	P18414	219 aa		3.2	□□□□□ -1.9
RPB7	YDR404C	SSH1	P38353	490 aa	Known RBP	3.2	□□□□□ -1.9
RPB7	YDR404C	NSA1	P53136	463 aa	Predicted RBP	3.2	□□□□□ -1.9
RPB7	YDR404C	TOS8	P53147	276 aa		3.2	□□□□□ -1.9
RPB7	YDR404C	CUS2	P53830	285 aa	Predicted RBP	3.2	□□□□□ -1.9
RPB7	YDR404C	GAS3	Q03655	524 aa		3.2	□□□□□ -1.9
RPB7	YDR404C	YLR179C	Q06252	201 aa	Known RBP	3.2	□□□□□ -1.9
RPB7	YDR404C	YPR063C	Q12160	140 aa		3.2	□□□□□ -1.9
RPB7	YDR404C	GEP5	Q12393	293 aa		3.2	□□□□□ -1.9
RPB7	YDR404C	DCN1	Q12395	269 aa		3.2	□□□□□ -1.9
RPB7	YDR404C	YOR032W-A	Q8TGS1	66 aa		3.2	□□□□□ -1.9
RPB7	YDR404C	YFR010W-A	P0C5N0	62 aa		3.19	□□□□□ -1.9
RPB7	YDR404C	TOM40	P23644	387 aa	Known RBP	3.19	□□□□□ -1.9
RPB7	YDR404C	PRY2	P36110	329 aa		3.19	□□□□□ -1.9
RPB7	YDR404C	RFC4	P40339	323 aa	Known RBP	3.19	□□□□□ -1.9
RPB7	YDR404C	YIL059C	P40520	121 aa		3.19	□□□□□ -1.9
RPB7	YDR404C	APQ12	P40532	138 aa		3.19	□□□□□ -1.9
RPB7	YDR404C	YFL051C	P43552	160 aa		3.19	□□□□□ -1.9
RPB7	YDR404C	MGA1	P53050	456 aa		3.19	□□□□□ -1.9
RPB7	YDR404C	MDM34	P53083	459 aa		3.19	□□□□□ -1.9
RPB7	YDR404C	YMR226C	Q05016	267 aa	Known RBP	3.19	□□□□□ -1.9
RPB7	YDR404C	HEM25	Q07534	307 aa		3.19	□□□□□ -1.9
RPB7	YDR404C	GET4	Q12125	312 aa		3.19	□□□□□ -1.9
RPB7	YDR404C	YDL012C	Q12489	107 aa		3.19	□□□□□ -1.9
RPB7	YDR404C	NOT5	Q12514	560 aa	Predicted RBP	3.19	□□□□□ -1.9
RPB7	YDR404C	YSF3	P0C074	85 aa	Predicted RBP	3.18	□□□□□ -1.9
RPB7	YDR404C	ZWF1	P11412	505 aa	Known RBP	3.18	□□□□□ -1.9
RPB7	YDR404C	HAM1	P47119	197 aa	Known RBP	3.18	□□□□□ -1.9
RPB7	YDR404C	ADO1	P47143	340 aa	Known RBP	3.18	□□□□□ -1.9
RPB7	YDR404C	YJR141W	P47172	347 aa	Predicted RBP	3.18	□□□□□ -1.9
RPB7	YDR404C	NUP57	P48837	541 aa		3.18	□□□□□ -1.9
RPB7	YDR404C	MPA43	P53583	542 aa	Predicted RBP	3.18	□□□□□ -1.9
RPB7	YDR404C	GIM3	P53900	129 aa		3.18	□□□□□ -1.9
RPB7	YDR404C	FYV6	P53913	173 aa		3.18	□□□□□ -1.9
RPB7	YDR404C	FCF1	Q05498	189 aa	Predicted RBP	3.18	□□□□□ -1.9
RPB7	YDR404C	ATG38	Q05789	226 aa	Known RBP	3.18	□□□□□ -1.9
RPB7	YDR404C	JLP1	Q12358	412 aa		3.18	□□□□□ -1.9
RPB7	YDR404C	RPS23A	P0CX29	145 aa	Known RBP	3.17	□□□□□ -1.9
RPB7	YDR404C	RPS23B	P0CX30	145 aa		3.17	□□□□□ -1.9
RPB7	YDR404C	URA6	P15700	204 aa		3.17	□□□□□ -1.9
RPB7	YDR404C	CBF1	P17106	351 aa		3.17	□□□□□ -1.9
RPB7	YDR404C	RAD51	P25454	400 aa		3.17	□□□□□ -1.9
RPB7	YDR404C	RNP1	P32385	249 aa		3.17	□□□□□ -1.9
RPB7	YDR404C	ECM14	P38836	430 aa		3.17	□□□□□ -1.9
RPB7	YDR404C	PFS2	P42841	465 aa	Known RBP	3.17	□□□□□ -1.9
RPB7	YDR404C	SEC22	P22214	214 aa		3.16	□□□□□ -1.9
RPB7	YDR404C	TRX3	P25372	127 aa		3.16	□□□□□ -1.9
RPB7	YDR404C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
RPB7	YDR404C	AGA2	P32781	87 aa		3.16	□□□□□ -1.9
RPB7	YDR404C	SRY1	P36007	326 aa		3.16	□□□□□ -1.9
RPB7	YDR404C	YHL037C	P38733	133 aa		3.16	□□□□□ -1.9
RPB7	YDR404C	HYR1	P40581	163 aa	Known RBP	3.16	□□□□□ -1.9
RPB7	YDR404C	MNN5	P46982	586 aa		3.16	□□□□□ -1.9
RPB7	YDR404C	MRX4	Q12467	430 aa		3.16	□□□□□ -1.9
RPB7	YDR404C	YLR462W	O13556	202 aa		3.15	□□□□□ -1.91
RPB7	YDR404C	HTB1	P02293	131 aa	Known RBP	3.15	□□□□□ -1.91
RPB7	YDR404C	HTB2	P02294	131 aa		3.15	□□□□□ -1.91
RPB7	YDR404C	HIS3	P06633	220 aa		3.15	□□□□□ -1.91
RPB7	YDR404C	BRR6	P53062	197 aa		3.15	□□□□□ -1.91
RPB7	YDR404C	GGA1	Q06336	557 aa		3.15	□□□□□ -1.91
RPB7	YDR404C	YPR172W	Q06608	200 aa		3.15	□□□□□ -1.91
RPB7	YDR404C	YHR139C-A	O13536	103 aa		3.14	□□□□□ -1.91
RPB7	YDR404C	YPK2	P18961	677 aa		3.14	□□□□□ -1.91
RPB7	YDR404C	SEC14	P24280	304 aa	Known RBP	3.14	□□□□□ -1.91
RPB7	YDR404C	RFA3	P26755	122 aa	Known RBP	3.14	□□□□□ -1.91
RPB7	YDR404C	HSP150	P32478	413 aa		3.14	□□□□□ -1.91
RPB7	YDR404C	FMT1	P32785	401 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms