RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C CSE2P33308 149 aa3.69□□□□□ -1.82
SPR28YDR218C SHE2P36068 246 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
SPR28YDR218C RPS20P38701 121 aaKnown RBP3.69□□□□□ -1.82
SPR28YDR218C GGC1P38988 300 aa3.69□□□□□ -1.82
SPR28YDR218C YPL073CP40323 161 aa3.69□□□□□ -1.82
SPR28YDR218C DLS1P40366 167 aa3.69□□□□□ -1.82
SPR28YDR218C YIL054WP40524 105 aa3.69□□□□□ -1.82
SPR28YDR218C ARP3P47117 449 aaKnown RBP3.69□□□□□ -1.82
SPR28YDR218C BNS1P50084 137 aa3.69□□□□□ -1.82
SPR28YDR218C YGR039WP53225 103 aa3.69□□□□□ -1.82
SPR28YDR218C GAS3Q03655 524 aa3.69□□□□□ -1.82
SPR28YDR218C INP1Q03694 420 aa3.69□□□□□ -1.82
SPR28YDR218C LPP1Q04396 274 aa3.69□□□□□ -1.82
SPR28YDR218C GRH1Q04410 372 aaKnown RBP3.69□□□□□ -1.82
SPR28YDR218C IES4Q08561 116 aa3.69□□□□□ -1.82
SPR28YDR218C NDD1Q08887 554 aa3.69□□□□□ -1.82
SPR28YDR218C FCY1Q12178 158 aa3.69□□□□□ -1.82
SPR28YDR218C YEL009C-AA0A023PZF2 135 aa3.68□□□□□ -1.82
SPR28YDR218C YPR170W-BP0C5R9 85 aa3.68□□□□□ -1.82
SPR28YDR218C RPL30P14120 105 aaKnown RBP3.68□□□□□ -1.82
SPR28YDR218C ATS1P31386 333 aa3.68□□□□□ -1.82
SPR28YDR218C OM14P38325 134 aa3.68□□□□□ -1.82
SPR28YDR218C TEM1P38987 245 aa3.68□□□□□ -1.82
SPR28YDR218C AYR1P40471 297 aa3.68□□□□□ -1.82
SPR28YDR218C GLC8P41818 229 aa3.68□□□□□ -1.82
SPR28YDR218C YGL088WP53151 121 aa3.68□□□□□ -1.82
SPR28YDR218C ALG9P53868 555 aaKnown RBP3.68□□□□□ -1.82
SPR28YDR218C SLM2P53955 656 aa3.68□□□□□ -1.82
SPR28YDR218C RUB1Q03919 77 aa3.68□□□□□ -1.82
SPR28YDR218C THI74Q04083 370 aa3.68□□□□□ -1.82
SPR28YDR218C SRL1Q08673 210 aa3.68□□□□□ -1.82
SPR28YDR218C FYV7Q12247 151 aa3.68□□□□□ -1.82
SPR28YDR218C PRR2Q12310 699 aa3.68□□□□□ -1.82
SPR28YDR218C IES3Q12345 250 aa3.68□□□□□ -1.82
SPR28YDR218C YLR462WO13556 202 aa3.67□□□□□ -1.82
SPR28YDR218C RPS8AP0CX39 200 aaKnown RBP3.67□□□□□ -1.82
SPR28YDR218C RPS8BP0CX40 200 aaKnown RBP3.67□□□□□ -1.82
SPR28YDR218C YFL068WP0CX99 160 aa3.67□□□□□ -1.82
SPR28YDR218C YLL066W-AP0CY00 160 aa3.67□□□□□ -1.82
SPR28YDR218C YLL067W-AP0CY01 160 aa3.67□□□□□ -1.82
SPR28YDR218C PET9P18239 318 aaKnown RBP3.67□□□□□ -1.82
SPR28YDR218C MRP49P32388 137 aa3.67□□□□□ -1.82
SPR28YDR218C TKL2P33315 681 aa3.67□□□□□ -1.82
SPR28YDR218C PAN3P36102 679 aaPredicted RBP3.67□□□□□ -1.82
SPR28YDR218C YAR068WP39564 161 aa3.67□□□□□ -1.82
SPR28YDR218C YEL075CP39972 122 aa3.67□□□□□ -1.82
SPR28YDR218C PGD1P40356 397 aa3.67□□□□□ -1.82
SPR28YDR218C YIL152WP40455 235 aa3.67□□□□□ -1.82
SPR28YDR218C GLR1P41921 483 aaKnown RBP3.67□□□□□ -1.82
SPR28YDR218C MIC19P43594 170 aa3.67□□□□□ -1.82
SPR28YDR218C YFR054CP43622 192 aa3.67□□□□□ -1.82
SPR28YDR218C YJL028WP47062 111 aa3.67□□□□□ -1.82
SPR28YDR218C YGL118CP53132 145 aa3.67□□□□□ -1.82
SPR28YDR218C YMR320WQ04897 101 aa3.67□□□□□ -1.82
SPR28YDR218C YDL180WQ12301 547 aa3.67□□□□□ -1.82
SPR28YDR218C YAL063C-AQ3E791 96 aa3.67□□□□□ -1.82
SPR28YDR218C CCA1P21269 546 aa3.66□□□□□ -1.82
SPR28YDR218C BET1P22804 142 aa3.66□□□□□ -1.82
SPR28YDR218C BAT1P38891 393 aaKnown RBP3.66□□□□□ -1.82
SPR28YDR218C FCY21P40039 528 aa3.66□□□□□ -1.82
SPR28YDR218C CWC27Q02770 301 aa3.66□□□□□ -1.82
SPR28YDR218C EMI1Q04406 187 aa3.66□□□□□ -1.82
SPR28YDR218C API2Q04413 109 aa3.66□□□□□ -1.82
SPR28YDR218C YMR253CQ04835 414 aa3.66□□□□□ -1.82
SPR28YDR218C LDB18Q07887 179 aa3.66□□□□□ -1.82
SPR28YDR218C YOR214CQ12282 236 aa3.66□□□□□ -1.82
SPR28YDR218C YHR139C-AO13536 103 aa3.65□□□□□ -1.83
SPR28YDR218C Q0255P03881 472 aa3.65□□□□□ -1.83
SPR28YDR218C CBP6P07253 162 aaPredicted RBP3.65□□□□□ -1.83
SPR28YDR218C OPY1P38271 328 aa3.65□□□□□ -1.83
SPR28YDR218C IRC22P40006 225 aa3.65□□□□□ -1.83
SPR28YDR218C FIS1P40515 155 aa3.65□□□□□ -1.83
SPR28YDR218C SKI6P46948 246 aaPredicted RBP3.65□□□□□ -1.83
SPR28YDR218C COS10P52924 374 aa3.65□□□□□ -1.83
SPR28YDR218C CGI121Q03705 181 aaKnown RBP3.65□□□□□ -1.83
SPR28YDR218C MRX8Q05473 314 aa3.65□□□□□ -1.83
SPR28YDR218C PBA1Q05778 276 aa3.65□□□□□ -1.83
SPR28YDR218C YTH1Q06102 208 aaPredicted RBP3.65□□□□□ -1.83
SPR28YDR218C NIP7Q08962 181 aaKnown RBP3.65□□□□□ -1.83
SPR28YDR218C TIR1P10863 254 aa3.64□□□□□ -1.83
SPR28YDR218C URA5P13298 226 aaKnown RBP3.64□□□□□ -1.83
SPR28YDR218C NMT1P14743 455 aa3.64□□□□□ -1.83
SPR28YDR218C PHO85P17157 305 aa3.64□□□□□ -1.83
SPR28YDR218C YCR043CP25361 127 aa3.64□□□□□ -1.83
SPR28YDR218C YCR101CP25607 182 aa3.64□□□□□ -1.83
SPR28YDR218C ZRT3P34240 503 aa3.64□□□□□ -1.83
SPR28YDR218C RPF1P38805 295 aaKnown RBP3.64□□□□□ -1.83
SPR28YDR218C NSG1P38837 291 aa3.64□□□□□ -1.83
SPR28YDR218C PFS2P42841 465 aaKnown RBP3.64□□□□□ -1.83
SPR28YDR218C ORM1P53224 222 aa3.64□□□□□ -1.83
SPR28YDR218C DIG2Q03373 323 aaKnown RBP3.64□□□□□ -1.83
SPR28YDR218C YMR244WQ04018 355 aa3.64□□□□□ -1.83
SPR28YDR218C TSA2Q04120 196 aa3.64□□□□□ -1.83
SPR28YDR218C YOR376WQ08900 122 aa3.64□□□□□ -1.83
SPR28YDR218C SMT3Q12306 101 aaKnown RBP3.64□□□□□ -1.83
SPR28YDR218C TIM22Q12328 207 aa3.64□□□□□ -1.83
SPR28YDR218C BOL1Q3E793 110 aa3.64□□□□□ -1.83
SPR28YDR218C YFR032C-BQ8TGU2 87 aa3.64□□□□□ -1.83
SPR28YDR218C YIL177CP40434 1758 aa3.63□□□□□ -1.83
SPR28YDR218C YJL225CP40889 1758 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms