RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W HTB1P02293 131 aaKnown RBP3.61□□□□□ -1.83
HSP42YDR171W HTB2P02294 131 aa3.61□□□□□ -1.83
HSP42YDR171W MATALPHA1P0CY06 175 aa3.61□□□□□ -1.83
HSP42YDR171W HMLALPHA1P0CY07 175 aa3.61□□□□□ -1.83
HSP42YDR171W RNA15P25299 296 aaPredicted RBP3.61□□□□□ -1.83
HSP42YDR171W ERG3P32353 365 aa3.61□□□□□ -1.83
HSP42YDR171W KKQ8P36004 724 aa3.61□□□□□ -1.83
HSP42YDR171W PMU1P36069 295 aa3.61□□□□□ -1.83
HSP42YDR171W YMR262WP38430 313 aa3.61□□□□□ -1.83
HSP42YDR171W WSS1P38838 269 aa3.61□□□□□ -1.83
HSP42YDR171W PAU5P43575 122 aa3.61□□□□□ -1.83
HSP42YDR171W GWT1P47026 490 aa3.61□□□□□ -1.83
HSP42YDR171W YJR012CP47087 207 aa3.61□□□□□ -1.83
HSP42YDR171W GPI14P47088 403 aaKnown RBP3.61□□□□□ -1.83
HSP42YDR171W OST3P48439 350 aa3.61□□□□□ -1.83
HSP42YDR171W YDL186WP48568 277 aa3.61□□□□□ -1.83
HSP42YDR171W BNS1P50084 137 aa3.61□□□□□ -1.83
HSP42YDR171W YGL235WP53071 178 aa3.61□□□□□ -1.83
HSP42YDR171W PRM1P53835 661 aa3.61□□□□□ -1.83
HSP42YDR171W ADD37Q03233 198 aa3.61□□□□□ -1.83
HSP42YDR171W GMC1Q04399 608 aa3.61□□□□□ -1.83
HSP42YDR171W NAT4Q04751 285 aa3.61□□□□□ -1.83
HSP42YDR171W TVP18Q04767 167 aa3.61□□□□□ -1.83
HSP42YDR171W TAZ1Q06510 381 aa3.61□□□□□ -1.83
HSP42YDR171W YDL211CQ12121 372 aa3.61□□□□□ -1.83
HSP42YDR171W POM33Q12164 279 aa3.61□□□□□ -1.83
HSP42YDR171W DET1Q99288 334 aaKnown RBP3.61□□□□□ -1.83
HSP42YDR171W ODC2Q99297 307 aa3.61□□□□□ -1.83
HSP42YDR171W RPL9AP05738 191 aaKnown RBP3.6□□□□□ -1.83
HSP42YDR171W ILV5P06168 395 aaKnown RBP3.6□□□□□ -1.83
HSP42YDR171W HAP3P13434 144 aa3.6□□□□□ -1.83
HSP42YDR171W MIR1P23641 311 aaKnown RBP3.6□□□□□ -1.83
HSP42YDR171W AIM29P36154 155 aa3.6□□□□□ -1.83
HSP42YDR171W IML3P38265 245 aa3.6□□□□□ -1.83
HSP42YDR171W YEA6P39953 335 aa3.6□□□□□ -1.83
HSP42YDR171W YEA4P40004 342 aa3.6□□□□□ -1.83
HSP42YDR171W GIM4P40005 111 aaKnown RBP3.6□□□□□ -1.83
HSP42YDR171W BTT1P40314 149 aaPredicted RBP3.6□□□□□ -1.83
HSP42YDR171W YGR149WP48236 432 aa3.6□□□□□ -1.83
HSP42YDR171W RPL9BP51401 191 aaKnown RBP3.6□□□□□ -1.83
HSP42YDR171W FLC3P53121 802 aa3.6□□□□□ -1.83
HSP42YDR171W YNR066CP53752 436 aa3.6□□□□□ -1.83
HSP42YDR171W WSC2P53832 503 aa3.6□□□□□ -1.83
HSP42YDR171W RUB1Q03919 77 aa3.6□□□□□ -1.83
HSP42YDR171W CAB5Q03941 241 aa3.6□□□□□ -1.83
HSP42YDR171W YCT1Q12235 531 aa3.6□□□□□ -1.83
HSP42YDR171W VAM3Q12241 283 aa3.6□□□□□ -1.83
HSP42YDR171W ORT1Q12375 292 aa3.6□□□□□ -1.83
HSP42YDR171W YOP1Q12402 180 aa3.6□□□□□ -1.83
HSP42YDR171W IZH2Q12442 317 aa3.6□□□□□ -1.83
HSP42YDR171W CDC39P25655 2108 aaKnown RBP3.59□□□□□ -1.83
HSP42YDR171W RIP1P08067 215 aa3.59□□□□□ -1.83
HSP42YDR171W NHP6AP11632 93 aaKnown RBP3.59□□□□□ -1.83
HSP42YDR171W PDX1P16451 410 aa3.59□□□□□ -1.83
HSP42YDR171W ATP10P18496 279 aa3.59□□□□□ -1.83
HSP42YDR171W RPB5P20434 215 aa3.59□□□□□ -1.83
HSP42YDR171W PRE1P22141 198 aaKnown RBP3.59□□□□□ -1.83
HSP42YDR171W YSR3P23501 404 aa3.59□□□□□ -1.83
HSP42YDR171W LSB5P25369 354 aa3.59□□□□□ -1.83
HSP42YDR171W MGM101P32787 269 aaKnown RBP3.59□□□□□ -1.83
HSP42YDR171W ALK2P32789 676 aaPredicted RBP3.59□□□□□ -1.83
HSP42YDR171W CHK1P38147 527 aa3.59□□□□□ -1.83
HSP42YDR171W SLM6P38343 150 aa3.59□□□□□ -1.83
HSP42YDR171W CUE1P38428 203 aa3.59□□□□□ -1.83
HSP42YDR171W HSP10P38910 106 aa3.59□□□□□ -1.83
HSP42YDR171W NSA2P40078 261 aaKnown RBP3.59□□□□□ -1.83
HSP42YDR171W BXI1P48558 297 aa3.59□□□□□ -1.83
HSP42YDR171W TOS2P50078 622 aa3.59□□□□□ -1.83
HSP42YDR171W YML018CQ03730 393 aa3.59□□□□□ -1.83
HSP42YDR171W YOR387CQ08910 206 aa3.59□□□□□ -1.83
HSP42YDR171W SRL2Q12020 392 aa3.59□□□□□ -1.83
HSP42YDR171W YPR064WQ12492 139 aa3.59□□□□□ -1.83
HSP42YDR171W MSB2P32334 1306 aa3.59□□□□□ -1.83
HSP42YDR171W QCR2P07257 368 aa3.58□□□□□ -1.84
HSP42YDR171W ATG15P25641 520 aa3.58□□□□□ -1.84
HSP42YDR171W DAL80P26343 269 aa3.58□□□□□ -1.84
HSP42YDR171W YOR062CP36025 268 aa3.58□□□□□ -1.84
HSP42YDR171W YKL075CP36083 450 aa3.58□□□□□ -1.84
HSP42YDR171W RRN10P38204 145 aa3.58□□□□□ -1.84
HSP42YDR171W POP2P39008 433 aa3.58□□□□□ -1.84
HSP42YDR171W SMD3P43321 101 aaKnown RBP3.58□□□□□ -1.84
HSP42YDR171W RMD9P53140 646 aaKnown RBP3.58□□□□□ -1.84
HSP42YDR171W BUD25P85052 153 aa3.58□□□□□ -1.84
HSP42YDR171W STD1Q02794 444 aa3.58□□□□□ -1.84
HSP42YDR171W YDR248CQ03786 193 aa3.58□□□□□ -1.84
HSP42YDR171W THI74Q04083 370 aa3.58□□□□□ -1.84
HSP42YDR171W YDR286CQ05530 114 aa3.58□□□□□ -1.84
HSP42YDR171W ATG5Q12380 294 aa3.58□□□□□ -1.84
HSP42YDR171W RAX2Q12465 1220 aa3.58□□□□□ -1.84
HSP42YDR171W COX5BP00425 151 aa3.57□□□□□ -1.84
HSP42YDR171W RPS25BP0C0T4 108 aaKnown RBP3.57□□□□□ -1.84
HSP42YDR171W BGL2P15703 313 aaKnown RBP3.57□□□□□ -1.84
HSP42YDR171W ARF2P19146 181 aaKnown RBP3.57□□□□□ -1.84
HSP42YDR171W MDH3P32419 343 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
HSP42YDR171W TCA17P32613 152 aa3.57□□□□□ -1.84
HSP42YDR171W TIM12P32830 109 aa3.57□□□□□ -1.84
HSP42YDR171W YKL071WP36086 256 aa3.57□□□□□ -1.84
HSP42YDR171W TVP23P38962 199 aa3.57□□□□□ -1.84
HSP42YDR171W HEM14P40012 539 aa3.57□□□□□ -1.84
HSP42YDR171W CDH1P53197 566 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms