RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	RPL2B	P0CX46	254 aa	Known RBP	1.5	□□□□□ -2.17
SLU7	YDR088C	URA5	P13298	226 aa	Known RBP	1.5	□□□□□ -2.17
SLU7	YDR088C	RPB3	P16370	318 aa	Known RBP	1.5	□□□□□ -2.17
SLU7	YDR088C	CBF1	P17106	351 aa		1.5	□□□□□ -2.17
SLU7	YDR088C	MAG1	P22134	296 aa	Known RBP	1.5	□□□□□ -2.17
SLU7	YDR088C	YGL010W	P25338	174 aa		1.5	□□□□□ -2.17
SLU7	YDR088C	SNC2	P33328	115 aa		1.5	□□□□□ -2.17
SLU7	YDR088C	YBR220C	P38318	560 aa		1.5	□□□□□ -2.17
SLU7	YDR088C	YDR274C	P87283	123 aa		1.5	□□□□□ -2.17
SLU7	YDR088C	GGA1	Q06336	557 aa		1.5	□□□□□ -2.17
SLU7	YDR088C	GPM2	Q12008	311 aa		1.5	□□□□□ -2.17
SLU7	YDR088C	MATALPHA2	P0CY08	210 aa		1.49	□□□□□ -2.17
SLU7	YDR088C	HMLALPHA2	P0CY09	210 aa		1.49	□□□□□ -2.17
SLU7	YDR088C	TRM5	P38793	499 aa		1.49	□□□□□ -2.17
SLU7	YDR088C	AIM25	P47140	327 aa		1.49	□□□□□ -2.17
SLU7	YDR088C	CUS2	P53830	285 aa	Predicted RBP	1.49	□□□□□ -2.17
SLU7	YDR088C	ANT1	Q06497	328 aa		1.49	□□□□□ -2.17
SLU7	YDR088C	ADF1	Q2V2Q1	113 aa		1.49	□□□□□ -2.17
SLU7	YDR088C	IKI3	Q06706	1349 aa	Known RBP	1.48	□□□□□ -2.17
SLU7	YDR088C	HMF1	P40037	129 aa	Known RBP	1.48	□□□□□ -2.17
SLU7	YDR088C	RPL13B	P40212	199 aa	Known RBP	1.48	□□□□□ -2.17
SLU7	YDR088C	RFC4	P40339	323 aa	Known RBP	1.48	□□□□□ -2.17
SLU7	YDR088C	NOP19	P53317	196 aa	Predicted RBP	1.48	□□□□□ -2.17
SLU7	YDR088C	NUP49	Q02199	472 aa		1.48	□□□□□ -2.17
SLU7	YDR088C	MDM32	Q12171	622 aa		1.48	□□□□□ -2.17
SLU7	YDR088C	RPL13A	Q12690	199 aa	Predicted RBP	1.48	□□□□□ -2.17
SLU7	YDR088C	ATG40	Q99325	256 aa		1.48	□□□□□ -2.17
SLU7	YDR088C	RPL27A	P0C2H6	136 aa	Known RBP	1.47	□□□□□ -2.17
SLU7	YDR088C	UPS2	P35200	230 aa		1.47	□□□□□ -2.17
SLU7	YDR088C	YBR285W	P38354	144 aa		1.47	□□□□□ -2.17
SLU7	YDR088C	ERJ5	P43613	295 aa	Predicted RBP	1.47	□□□□□ -2.17
SLU7	YDR088C	POP3	P53833	195 aa	Predicted RBP	1.47	□□□□□ -2.17
SLU7	YDR088C	GRX3	Q03835	250 aa		1.47	□□□□□ -2.17
SLU7	YDR088C	SIR2	P06700	562 aa		1.46	□□□□□ -2.18
SLU7	YDR088C	FPR1	P20081	114 aa	Known RBP	1.46	□□□□□ -2.18
SLU7	YDR088C	TMA19	P35691	167 aa	Known RBP	1.46	□□□□□ -2.18
SLU7	YDR088C	OPY1	P38271	328 aa		1.46	□□□□□ -2.18
SLU7	YDR088C	VMA22	P38784	181 aa		1.46	□□□□□ -2.18
SLU7	YDR088C	ERG10	P41338	398 aa	Known RBP	1.46	□□□□□ -2.18
SLU7	YDR088C	KNH1	P50112	268 aa		1.46	□□□□□ -2.18
SLU7	YDR088C	MPC3	P53311	146 aa		1.46	□□□□□ -2.18
SLU7	YDR088C	SAY1	P53324	424 aa		1.46	□□□□□ -2.18
SLU7	YDR088C	ABP140	Q08641	628 aa	Known RBP	1.46	□□□□□ -2.18
SLU7	YDR088C	YLR236C	A0A023PZG4	107 aa		1.45	□□□□□ -2.18
SLU7	YDR088C	QCR7	P00128	127 aa		1.45	□□□□□ -2.18
SLU7	YDR088C	OCH1	P31755	480 aa		1.45	□□□□□ -2.18
SLU7	YDR088C	GET1	P53192	235 aa		1.45	□□□□□ -2.18
SLU7	YDR088C	CWC21	Q03375	135 aa	Known RBP	1.45	□□□□□ -2.18
SLU7	YDR088C	YMR226C	Q05016	267 aa	Known RBP	1.45	□□□□□ -2.18
SLU7	YDR088C	GET4	Q12125	312 aa		1.45	□□□□□ -2.18
SLU7	YDR088C	MRS1	P07266	363 aa		1.44	□□□□□ -2.18
SLU7	YDR088C	QCR8	P08525	94 aa		1.44	□□□□□ -2.18
SLU7	YDR088C	GPA2	P10823	449 aa		1.44	□□□□□ -2.18
SLU7	YDR088C	CKS1	P20486	150 aa	Known RBP	1.44	□□□□□ -2.18
SLU7	YDR088C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	1.44	□□□□□ -2.18	not detected
SLU7	YDR088C	YBR209W	P38311	105 aa		1.44	□□□□□ -2.18
SLU7	YDR088C	MMS2	P53152	137 aa		1.44	□□□□□ -2.18
SLU7	YDR088C	MRPS17	Q03246	237 aa	Predicted RBP	1.44	□□□□□ -2.18
SLU7	YDR088C	HNT1	Q04344	158 aa	Known RBP	1.44	□□□□□ -2.18
SLU7	YDR088C	JIP3	O13555	125 aa		1.43	□□□□□ -2.18
SLU7	YDR088C	TFC1	P32367	649 aa		1.43	□□□□□ -2.18
SLU7	YDR088C	KDX1	P36005	433 aa		1.43	□□□□□ -2.18
SLU7	YDR088C	MZM1	Q03429	123 aa	Predicted RBP	1.43	□□□□□ -2.18
SLU7	YDR088C	POR1	P04840	283 aa	Known RBP	1.42	□□□□□ -2.18
SLU7	YDR088C	APA2	P22108	325 aa		1.42	□□□□□ -2.18
SLU7	YDR088C	CNB1	P25296	175 aa		1.42	□□□□□ -2.18
SLU7	YDR088C	PAN3	P36102	679 aa	Predicted RBP	1.42	□□□□□ -2.18
SLU7	YDR088C	RAD28	Q12021	506 aa		1.42	□□□□□ -2.18
SLU7	YDR088C	MBF1	O14467	151 aa	Known RBP	1.41	□□□□□ -2.18
SLU7	YDR088C	SEC11	P15367	167 aa		1.41	□□□□□ -2.18
SLU7	YDR088C	SPO13	P23624	291 aa		1.41	□□□□□ -2.18
SLU7	YDR088C	ASF2	P32448	525 aa	Predicted RBP	1.41	□□□□□ -2.18
SLU7	YDR088C	ARP3	P47117	449 aa	Known RBP	1.41	□□□□□ -2.18
SLU7	YDR088C	CGR1	P53188	120 aa		1.41	□□□□□ -2.18
SLU7	YDR088C	MPA43	P53583	542 aa	Predicted RBP	1.41	□□□□□ -2.18
SLU7	YDR088C	ODC2	Q99297	307 aa		1.41	□□□□□ -2.18
SLU7	YDR088C	RAD9	P14737	1309 aa		1.4	□□□□□ -2.18
SLU7	YDR088C	YEA4	P40004	342 aa		1.4	□□□□□ -2.19
SLU7	YDR088C	CUE4	Q04201	117 aa	Predicted RBP	1.4	□□□□□ -2.19
SLU7	YDR088C	RIO1	Q12196	484 aa	Known RBP	1.4	□□□□□ -2.19
SLU7	YDR088C	MSB2	P32334	1306 aa		1.4	□□□□□ -2.19
SLU7	YDR088C	YPK2	P18961	677 aa		1.39	□□□□□ -2.19
SLU7	YDR088C	YCR090C	P25654	182 aa	Known RBP	1.39	□□□□□ -2.19
SLU7	YDR088C	TVP38	P36164	337 aa		1.39	□□□□□ -2.19
SLU7	YDR088C	YER034W	P40022	185 aa	Known RBP	1.39	□□□□□ -2.19
SLU7	YDR088C	YER076C	P40049	302 aa		1.39	□□□□□ -2.19
SLU7	YDR088C	SER2	P42941	309 aa		1.39	□□□□□ -2.19
SLU7	YDR088C	SKI6	P46948	246 aa	Predicted RBP	1.39	□□□□□ -2.19
SLU7	YDR088C	YJR111C	P47148	283 aa	Known RBP	1.39	□□□□□ -2.19
SLU7	YDR088C	YNL184C	P53876	108 aa		1.39	□□□□□ -2.19
SLU7	YDR088C	IGO2	Q9P305	131 aa		1.39	□□□□□ -2.19
SLU7	YDR088C	ADE1	P27616	306 aa		1.38	□□□□□ -2.19
SLU7	YDR088C	TVP23	P38962	199 aa		1.38	□□□□□ -2.19
SLU7	YDR088C	UBC12	P52491	188 aa		1.38	□□□□□ -2.19
SLU7	YDR088C	ARO8	P53090	500 aa	Known RBP	1.38	□□□□□ -2.19
SLU7	YDR088C	ARO80	Q04052	950 aa		1.38	□□□□□ -2.19
SLU7	YDR088C	YOL014W	Q08110	124 aa		1.38	□□□□□ -2.19
SLU7	YDR088C	DGA1	Q08650	418 aa		1.38	□□□□□ -2.19
SLU7	YDR088C	YDL180W	Q12301	547 aa		1.38	□□□□□ -2.19
SLU7	YDR088C	FMP23	P38231	175 aa		1.37	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 179 ms