RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C SPG3Q04398 127 aaPredicted RBP2.08□□□□□ -2.08
RRI1YDL216C SSN2P38931 1420 aa2.07□□□□□ -2.08
RRI1YDL216C THP2O13539 261 aaKnown RBP2.07□□□□□ -2.08
RRI1YDL216C RPL27BP0C2H7 136 aaKnown RBP2.07□□□□□ -2.08
RRI1YDL216C URA8P38627 578 aaPredicted RBP2.07□□□□□ -2.08
RRI1YDL216C YNL217WP40152 326 aa2.07□□□□□ -2.08
RRI1YDL216C MZM1Q03429 123 aaPredicted RBP2.07□□□□□ -2.08
RRI1YDL216C PDR12Q02785 1511 aa2.06□□□□□ -2.08
RRI1YDL216C CDC28P00546 298 aaKnown RBP2.06□□□□□ -2.08
RRI1YDL216C YMR31P19955 123 aa2.06□□□□□ -2.08
RRI1YDL216C PPA2P28239 310 aa2.06□□□□□ -2.08
RRI1YDL216C MRPL28P36527 147 aa2.06□□□□□ -2.08
RRI1YDL216C YBR220CP38318 560 aa2.06□□□□□ -2.08
RRI1YDL216C MIC12P38341 106 aa2.06□□□□□ -2.08
RRI1YDL216C FAR7P43592 221 aa2.06□□□□□ -2.08
RRI1YDL216C YDR248CQ03786 193 aa2.06□□□□□ -2.08
RRI1YDL216C SNT2P53127 1403 aa2.06□□□□□ -2.08
RRI1YDL216C VMR1P38735 1592 aa2.06□□□□□ -2.08
RRI1YDL216C BCK1Q01389 1478 aa2.05□□□□□ -2.08
RRI1YDL216C YLR156WP0CE96 114 aa2.05□□□□□ -2.08
RRI1YDL216C YLR159WP0CE97 114 aa2.05□□□□□ -2.08
RRI1YDL216C YLR161WP0CE98 114 aa2.05□□□□□ -2.08
RRI1YDL216C FZF1P32805 299 aa2.05□□□□□ -2.08
RRI1YDL216C BMH2P34730 273 aaKnown RBP2.05□□□□□ -2.08
RRI1YDL216C BXI1P48558 297 aa2.05□□□□□ -2.08
RRI1YDL216C DOC1P53068 250 aa2.05□□□□□ -2.08
RRI1YDL216C CSI2Q08054 341 aa2.05□□□□□ -2.08
RRI1YDL216C FLO9P39712 1322 aa2.05□□□□□ -2.08
RRI1YDL216C APS1P35181 156 aa2.04□□□□□ -2.08
RRI1YDL216C YET1P35723 206 aa2.04□□□□□ -2.08
RRI1YDL216C UMP1P38293 148 aa2.04□□□□□ -2.08
RRI1YDL216C RTR1P40084 226 aaPredicted RBP2.04□□□□□ -2.08
RRI1YDL216C YRB1P41920 201 aaKnown RBP2.04□□□□□ -2.08
RRI1YDL216C NUP57P48837 541 aa2.04□□□□□ -2.08
RRI1YDL216C SWP1Q02795 286 aa2.04□□□□□ -2.08
RRI1YDL216C YLR162WQ06235 118 aa2.04□□□□□ -2.08
RRI1YDL216C TSC3Q3E790 80 aa2.04□□□□□ -2.08
RRI1YDL216C SEY1Q99287 776 aa2.04□□□□□ -2.08
RRI1YDL216C TOM1Q03280 3268 aa2.04□□□□□ -2.08
RRI1YDL216C FKS3Q04952 1785 aa2.03□□□□□ -2.08
RRI1YDL216C SKG1P36169 355 aa2.03□□□□□ -2.08
RRI1YDL216C RPL13BP40212 199 aaKnown RBP2.03□□□□□ -2.08
RRI1YDL216C YRB2P40517 327 aa2.03□□□□□ -2.08
RRI1YDL216C OTU1P43558 301 aa2.03□□□□□ -2.08
RRI1YDL216C ALG13P53178 202 aa2.03□□□□□ -2.08
RRI1YDL216C RPL13AQ12690 199 aaPredicted RBP2.03□□□□□ -2.08
RRI1YDL216C TDA8Q6B2U8 126 aa2.03□□□□□ -2.08
RRI1YDL216C RPL28P02406 149 aaKnown RBP2.02□□□□□ -2.09
RRI1YDL216C YBR121C-AP0C5L4 52 aa2.02□□□□□ -2.09
RRI1YDL216C DBF2P22204 572 aa2.02□□□□□ -2.09
RRI1YDL216C SNC2P33328 115 aa2.02□□□□□ -2.09
RRI1YDL216C SMC4Q12267 1418 aa2.01□□□□□ -2.09
RRI1YDL216C FPR1P20081 114 aaKnown RBP2.01□□□□□ -2.09
RRI1YDL216C TCA17P32613 152 aa2.01□□□□□ -2.09
RRI1YDL216C TMA19P35691 167 aaKnown RBP2.01□□□□□ -2.09
RRI1YDL216C MRPL17P36528 281 aa2.01□□□□□ -2.09
RRI1YDL216C GLE2P40066 365 aa2.01□□□□□ -2.09
RRI1YDL216C NCB2Q92317 146 aa2.01□□□□□ -2.09
RRI1YDL216C NUM1Q00402 2748 aa2.01□□□□□ -2.09
RRI1YDL216C NHP6BP11633 99 aaKnown RBP2□□□□□ -2.09
RRI1YDL216C YAP3P38749 330 aa2□□□□□ -2.09
RRI1YDL216C TCD1P38756 429 aa2□□□□□ -2.09
RRI1YDL216C RTC3P38804 111 aaPredicted RBP2□□□□□ -2.09
RRI1YDL216C GAS3Q03655 524 aa2□□□□□ -2.09
RRI1YDL216C URB1P34241 1764 aaKnown RBP2□□□□□ -2.09
RRI1YDL216C RPL2AP0CX45 254 aaKnown RBP1.99□□□□□ -2.09
RRI1YDL216C RPL2BP0CX46 254 aaKnown RBP1.99□□□□□ -2.09
RRI1YDL216C UPS2P35200 230 aa1.99□□□□□ -2.09
RRI1YDL216C GAA1P39012 614 aa1.99□□□□□ -2.09
RRI1YDL216C SAY1P53324 424 aa1.99□□□□□ -2.09
RRI1YDL216C NUP49Q02199 472 aa1.99□□□□□ -2.09
RRI1YDL216C JLP1Q12358 412 aa1.99□□□□□ -2.09
RRI1YDL216C YKL183C-AQ3E765 70 aa1.99□□□□□ -2.09
RRI1YDL216C PDR11P40550 1411 aa1.99□□□□□ -2.09
RRI1YDL216C POL1P13382 1468 aa1.99□□□□□ -2.09
RRI1YDL216C SNF2P22082 1703 aa1.98□□□□□ -2.09
RRI1YDL216C PBN1P25580 416 aa1.98□□□□□ -2.09
RRI1YDL216C SEC17P32602 292 aa1.98□□□□□ -2.09
RRI1YDL216C ANT1Q06497 328 aa1.98□□□□□ -2.09
RRI1YDL216C MCP1Q12106 302 aa1.98□□□□□ -2.09
RRI1YDL216C RUD3Q12234 484 aaKnown RBP1.98□□□□□ -2.09
RRI1YDL216C SEC7P11075 2009 aaKnown RBP1.98□□□□□ -2.09
RRI1YDL216C TIM9O74700 87 aa1.97□□□□□ -2.09
RRI1YDL216C GPA2P10823 449 aa1.97□□□□□ -2.09
RRI1YDL216C SIP3P38717 1229 aa1.97□□□□□ -2.09
RRI1YDL216C RMD6P39975 231 aa1.97□□□□□ -2.09
RRI1YDL216C ERG28P40030 148 aa1.97□□□□□ -2.09
RRI1YDL216C GVP36P40531 326 aaKnown RBP1.97□□□□□ -2.09
RRI1YDL216C GCN20P43535 752 aaKnown RBP1.97□□□□□ -2.09
RRI1YDL216C MGA1P53050 456 aa1.97□□□□□ -2.09
RRI1YDL216C YNR077CP53758 84 aa1.97□□□□□ -2.09
RRI1YDL216C GPM2Q12008 311 aa1.97□□□□□ -2.09
RRI1YDL216C FSF1Q12029 327 aaKnown RBP1.97□□□□□ -2.09
RRI1YDL216C RIO1Q12196 484 aaKnown RBP1.97□□□□□ -2.09
RRI1YDL216C PDR5P33302 1511 aaKnown RBP1.97□□□□□ -2.09
RRI1YDL216C VPS13Q07878 3144 aa1.97□□□□□ -2.09
RRI1YDL216C TFC1P32367 649 aa1.96□□□□□ -2.1
RRI1YDL216C PRX1P34227 261 aaKnown RBP1.96□□□□□ -2.1
RRI1YDL216C IRC18P47056 224 aa1.96□□□□□ -2.1
RRI1YDL216C ADO1P47143 340 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms