RNA–Protein interactions for RNA: YDL105W

NSE4, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE4, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE4YDL105W YET1P35723 206 aa1.56□□□□□ -2.16
NSE4YDL105W UTP30P36144 274 aaKnown RBP1.56□□□□□ -2.16
NSE4YDL105W HMF1P40037 129 aaKnown RBP1.56□□□□□ -2.16
NSE4YDL105W BOL2P53082 120 aa1.56□□□□□ -2.16
NSE4YDL105W ATG38Q05789 226 aaKnown RBP1.56□□□□□ -2.16
NSE4YDL105W MCP1Q12106 302 aa1.56□□□□□ -2.16
NSE4YDL105W YFR032C-BQ8TGU2 87 aa1.56□□□□□ -2.16
NSE4YDL105W FLO9P39712 1322 aa1.56□□□□□ -2.16
NSE4YDL105W YIL177CP40434 1758 aa1.56□□□□□ -2.16
NSE4YDL105W YJL225CP40889 1758 aa1.56□□□□□ -2.16
NSE4YDL105W YGL010WP25338 174 aa1.55□□□□□ -2.16
NSE4YDL105W FZF1P32805 299 aa1.55□□□□□ -2.16
NSE4YDL105W SNC2P33328 115 aa1.55□□□□□ -2.16
NSE4YDL105W MRPL17P36528 281 aa1.55□□□□□ -2.16
NSE4YDL105W UMP1P38293 148 aa1.55□□□□□ -2.16
NSE4YDL105W GVP36P40531 326 aaKnown RBP1.55□□□□□ -2.16
NSE4YDL105W YDR249CQ03787 373 aa1.55□□□□□ -2.16
NSE4YDL105W FUS2Q05670 677 aa1.55□□□□□ -2.16
NSE4YDL105W SIR2P06700 562 aa1.54□□□□□ -2.16
NSE4YDL105W MRS1P07266 363 aa1.54□□□□□ -2.16
NSE4YDL105W RPB3P16370 318 aaKnown RBP1.54□□□□□ -2.16
NSE4YDL105W CKS1P20486 150 aaKnown RBP1.54□□□□□ -2.16
NSE4YDL105W DOC1P53068 250 aa1.54□□□□□ -2.16
NSE4YDL105W HOP2P53187 214 aa1.54□□□□□ -2.16
NSE4YDL105W CSI2Q08054 341 aa1.54□□□□□ -2.16
NSE4YDL105W MET5P47169 1442 aa1.54□□□□□ -2.16
NSE4YDL105W CAF4P36130 643 aa1.53□□□□□ -2.16
NSE4YDL105W AIM2P39721 246 aa1.53□□□□□ -2.16
NSE4YDL105W GLE2P40066 365 aa1.53□□□□□ -2.16
NSE4YDL105W SAC3P46674 1301 aa1.53□□□□□ -2.16
NSE4YDL105W EAF6P47128 113 aa1.53□□□□□ -2.16
NSE4YDL105W SAY1P53324 424 aa1.53□□□□□ -2.16
NSE4YDL105W RTC4P53850 401 aa1.53□□□□□ -2.16
NSE4YDL105W HNT1Q04344 158 aaKnown RBP1.53□□□□□ -2.16
NSE4YDL105W YLR162WQ06235 118 aa1.53□□□□□ -2.16
NSE4YDL105W IKI3Q06706 1349 aaKnown RBP1.53□□□□□ -2.16
NSE4YDL105W YNG1Q08465 219 aa1.53□□□□□ -2.16
NSE4YDL105W GPM2Q12008 311 aa1.53□□□□□ -2.16
NSE4YDL105W APA2P22108 325 aa1.52□□□□□ -2.17
NSE4YDL105W ADE1P27616 306 aa1.52□□□□□ -2.17
NSE4YDL105W ATP7P30902 174 aa1.52□□□□□ -2.17
NSE4YDL105W ASF2P32448 525 aaPredicted RBP1.52□□□□□ -2.17
NSE4YDL105W YBR220CP38318 560 aa1.52□□□□□ -2.17
NSE4YDL105W RPL13BP40212 199 aaKnown RBP1.52□□□□□ -2.17
NSE4YDL105W PDS1P40316 373 aaPredicted RBP1.52□□□□□ -2.17
NSE4YDL105W YDR274CP87283 123 aa1.52□□□□□ -2.17
NSE4YDL105W MZM1Q03429 123 aaPredicted RBP1.52□□□□□ -2.17
NSE4YDL105W RIO1Q12196 484 aaKnown RBP1.52□□□□□ -2.17
NSE4YDL105W RPL13AQ12690 199 aaPredicted RBP1.52□□□□□ -2.17
NSE4YDL105W IGO2Q9P305 131 aa1.52□□□□□ -2.17
NSE4YDL105W MBF1O14467 151 aaKnown RBP1.51□□□□□ -2.17
NSE4YDL105W FPR1P20081 114 aaKnown RBP1.51□□□□□ -2.17
NSE4YDL105W ATP15P21306 62 aa1.51□□□□□ -2.17
NSE4YDL105W CNB1P25296 175 aa1.51□□□□□ -2.17
NSE4YDL105W TMA19P35691 167 aaKnown RBP1.51□□□□□ -2.17
NSE4YDL105W SHG1P38337 142 aa1.51□□□□□ -2.17
NSE4YDL105W YBR285WP38354 144 aa1.51□□□□□ -2.17
NSE4YDL105W GAA1P39012 614 aa1.51□□□□□ -2.17
NSE4YDL105W ERG10P41338 398 aaKnown RBP1.51□□□□□ -2.17
NSE4YDL105W GGA1Q06336 557 aa1.51□□□□□ -2.17
NSE4YDL105W SNF4P12904 322 aa1.5□□□□□ -2.17
NSE4YDL105W TRX3P25372 127 aa1.5□□□□□ -2.17
NSE4YDL105W TAH1P25638 111 aaPredicted RBP1.5□□□□□ -2.17
NSE4YDL105W YCR090CP25654 182 aaKnown RBP1.5□□□□□ -2.17
NSE4YDL105W TFC1P32367 649 aa1.5□□□□□ -2.17
NSE4YDL105W YBR209WP38311 105 aa1.5□□□□□ -2.17
NSE4YDL105W SEC72P39742 193 aaKnown RBP1.5□□□□□ -2.17
NSE4YDL105W YNR077CP53758 84 aa1.5□□□□□ -2.17
NSE4YDL105W ANT1Q06497 328 aa1.5□□□□□ -2.17
NSE4YDL105W YET3Q07451 203 aa1.5□□□□□ -2.17
NSE4YDL105W YLR031WQ07978 186 aa1.5□□□□□ -2.17
NSE4YDL105W YLR036CQ07986 203 aa1.5□□□□□ -2.17
NSE4YDL105W YOL024WQ08172 172 aa1.5□□□□□ -2.17
NSE4YDL105W FSF1Q12029 327 aaKnown RBP1.5□□□□□ -2.17
NSE4YDL105W YDL085C-AQ3E7B7 68 aaKnown RBP1.5□□□□□ -2.17
NSE4YDL105W RPL2AP0CX45 254 aaKnown RBP1.49□□□□□ -2.17
NSE4YDL105W RPL2BP0CX46 254 aaKnown RBP1.49□□□□□ -2.17
NSE4YDL105W GPA2P10823 449 aa1.49□□□□□ -2.17
NSE4YDL105W SHE2P36068 246 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
NSE4YDL105W ARP3P47117 449 aaKnown RBP1.49□□□□□ -2.17
NSE4YDL105W YNL184CP53876 108 aa1.49□□□□□ -2.17
NSE4YDL105W NUP49Q02199 472 aa1.49□□□□□ -2.17
NSE4YDL105W ARO80Q04052 950 aa1.49□□□□□ -2.17
NSE4YDL105W NOC4Q06512 552 aaPredicted RBP1.49□□□□□ -2.17
NSE4YDL105W DGA1Q08650 418 aa1.49□□□□□ -2.17
NSE4YDL105W CHD1P32657 1468 aa1.49□□□□□ -2.17
NSE4YDL105W PDR18P53756 1333 aa1.48□□□□□ -2.17
NSE4YDL105W CPA1P07258 411 aaKnown RBP1.48□□□□□ -2.17
NSE4YDL105W UPS2P35200 230 aa1.48□□□□□ -2.17
NSE4YDL105W ERJ5P43613 295 aaPredicted RBP1.48□□□□□ -2.17
NSE4YDL105W ODC2Q99297 307 aa1.48□□□□□ -2.17
NSE4YDL105W ATG40Q99325 256 aa1.48□□□□□ -2.17
NSE4YDL105W UBR2Q07963 1872 aa1.48□□□□□ -2.17
NSE4YDL105W QCR8P08525 94 aa1.47□□□□□ -2.17
NSE4YDL105W OCH1P31755 480 aa1.47□□□□□ -2.17
NSE4YDL105W KDX1P36005 433 aa1.47□□□□□ -2.17
NSE4YDL105W EGD2P38879 174 aaKnown RBP1.47□□□□□ -2.17
NSE4YDL105W YEA4P40004 342 aa1.47□□□□□ -2.17
NSE4YDL105W SER2P42941 309 aa1.47□□□□□ -2.17
NSE4YDL105W SKI6P46948 246 aaPredicted RBP1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 192.5 ms