RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	FAR7	P43592	221 aa		0.13	□□□□□ -2.39
HMRA2	YCR096C	BRR6	P53062	197 aa		0.13	□□□□□ -2.39
HMRA2	YCR096C	YGR050C	P53231	118 aa		0.13	□□□□□ -2.39
HMRA2	YCR096C	FYV6	P53913	173 aa		0.13	□□□□□ -2.39
HMRA2	YCR096C	YLR460C	P54007	376 aa		0.13	□□□□□ -2.39
HMRA2	YCR096C	YHR007C-A	Q07074	71 aa		0.13	□□□□□ -2.39
HMRA2	YCR096C	FIT2	Q08906	153 aa		0.13	□□□□□ -2.39
HMRA2	YCR096C	MDM35	O60200	86 aa		0.12	□□□□□ -2.39
HMRA2	YCR096C	SEC4	P07560	215 aa	Known RBP	0.12	□□□□□ -2.39
HMRA2	YCR096C	BET1	P22804	142 aa		0.12	□□□□□ -2.39
HMRA2	YCR096C	SPO13	P23624	291 aa		0.12	□□□□□ -2.39
HMRA2	YCR096C	YCR016W	P25617	290 aa	Known RBP	0.12	□□□□□ -2.39
HMRA2	YCR096C	MIC12	P38341	106 aa		0.12	□□□□□ -2.39
HMRA2	YCR096C	YHL018W	P38744	120 aa	Predicted RBP	0.12	□□□□□ -2.39
HMRA2	YCR096C	RTC3	P38804	111 aa	Predicted RBP	0.12	□□□□□ -2.39
HMRA2	YCR096C	YER034W	P40022	185 aa	Known RBP	0.12	□□□□□ -2.39
HMRA2	YCR096C	YML108W	Q03759	105 aa		0.12	□□□□□ -2.39
HMRA2	YCR096C	LCL2	Q08045	131 aa		0.12	□□□□□ -2.39
HMRA2	YCR096C	URA5	P13298	226 aa	Known RBP	0.11	□□□□□ -2.39
HMRA2	YCR096C	KSS1	P14681	368 aa		0.11	□□□□□ -2.39
HMRA2	YCR096C	RPB3	P16370	318 aa	Known RBP	0.11	□□□□□ -2.39
HMRA2	YCR096C	YMR31	P19955	123 aa		0.11	□□□□□ -2.39
HMRA2	YCR096C	PRX1	P34227	261 aa	Known RBP	0.11	□□□□□ -2.39
HMRA2	YCR096C	TVP23	P38962	199 aa		0.11	□□□□□ -2.39
HMRA2	YCR096C	FMC1	P40491	155 aa		0.11	□□□□□ -2.39
HMRA2	YCR096C	MIC26	P50087	233 aa		0.11	□□□□□ -2.39
HMRA2	YCR096C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.11	□□□□□ -2.39	not detected
HMRA2	YCR096C	RRN5	Q02983	363 aa		0.11	□□□□□ -2.39
HMRA2	YCR096C	RNH202	Q05635	350 aa		0.11	□□□□□ -2.39
HMRA2	YCR096C	MED4	Q12343	284 aa		0.11	□□□□□ -2.39
HMRA2	YCR096C	COA3	Q3E7B2	85 aa		0.11	□□□□□ -2.39
HMRA2	YCR096C	DUR1,2	P32528	1835 aa	Known RBP	0.1	□□□□□ -2.39
HMRA2	YCR096C	POR1	P04840	283 aa	Known RBP	0.1	□□□□□ -2.39
HMRA2	YCR096C	RMD6	P39975	231 aa		0.1	□□□□□ -2.39
HMRA2	YCR096C	YLR283W	Q05867	314 aa		0.1	□□□□□ -2.39
HMRA2	YCR096C	YPR174C	Q06616	221 aa	Predicted RBP	0.1	□□□□□ -2.39
HMRA2	YCR096C	YNG1	Q08465	219 aa		0.1	□□□□□ -2.39
HMRA2	YCR096C	YPR013C	Q12145	317 aa		0.1	□□□□□ -2.39
HMRA2	YCR096C	YKL183C-A	Q3E765	70 aa		0.1	□□□□□ -2.39
HMRA2	YCR096C	YLR422W	Q06409	1932 aa		0.09	□□□□□ -2.39
HMRA2	YCR096C	THP2	O13539	261 aa	Known RBP	0.09	□□□□□ -2.4
HMRA2	YCR096C	RPL28	P02406	149 aa	Known RBP	0.09	□□□□□ -2.4
HMRA2	YCR096C	SEN2	P16658	377 aa		0.09	□□□□□ -2.4
HMRA2	YCR096C	YEA4	P40004	342 aa		0.09	□□□□□ -2.4
HMRA2	YCR096C	COX15	P40086	486 aa		0.09	□□□□□ -2.4
HMRA2	YCR096C	ADO1	P47143	340 aa	Known RBP	0.09	□□□□□ -2.4
HMRA2	YCR096C	DGA1	Q08650	418 aa		0.09	□□□□□ -2.4
HMRA2	YCR096C	COX8	P04039	78 aa		0.08	□□□□□ -2.4
HMRA2	YCR096C	VMA6	P32366	345 aa	Known RBP	0.08	□□□□□ -2.4
HMRA2	YCR096C	SPS18	P32572	300 aa		0.08	□□□□□ -2.4
HMRA2	YCR096C	HPA3	P39979	161 aa		0.08	□□□□□ -2.4
HMRA2	YCR096C	ERG28	P40030	148 aa		0.08	□□□□□ -2.4
HMRA2	YCR096C	YNL194C	P40169	301 aa		0.08	□□□□□ -2.4
HMRA2	YCR096C	MGA1	P53050	456 aa		0.08	□□□□□ -2.4
HMRA2	YCR096C	IRC23	Q08416	157 aa		0.08	□□□□□ -2.4
HMRA2	YCR096C	YDR157W	A0A023PZE8	133 aa		0.07	□□□□□ -2.4
HMRA2	YCR096C	GCN3	P14741	305 aa		0.07	□□□□□ -2.4
HMRA2	YCR096C	MER1	P16523	270 aa		0.07	□□□□□ -2.4
HMRA2	YCR096C	STP22	P25604	385 aa		0.07	□□□□□ -2.4
HMRA2	YCR096C	OCH1	P31755	480 aa		0.07	□□□□□ -2.4
HMRA2	YCR096C	UGX2	P32772	223 aa		0.07	□□□□□ -2.4
HMRA2	YCR096C	RPB7	P34087	171 aa		0.07	□□□□□ -2.4
HMRA2	YCR096C	YER085C	P40058	173 aa		0.07	□□□□□ -2.4
HMRA2	YCR096C	LSM7	P53905	115 aa	Known RBP	0.07	□□□□□ -2.4
HMRA2	YCR096C	COG5	P53951	403 aa		0.07	□□□□□ -2.4
HMRA2	YCR096C	PRP11	Q07350	266 aa	Predicted RBP	0.07	□□□□□ -2.4
HMRA2	YCR096C	IKI3	Q06706	1349 aa	Known RBP	0.07	□□□□□ -2.4
HMRA2	YCR096C	HFA1	P32874	2273 aa		0.07	□□□□□ -2.4
HMRA2	YCR096C	SSO1	P32867	290 aa		0.06	□□□□□ -2.4
HMRA2	YCR096C	CBT1	P36038	271 aa	Predicted RBP	0.06	□□□□□ -2.4
HMRA2	YCR096C	PAN3	P36102	679 aa	Predicted RBP	0.06	□□□□□ -2.4
HMRA2	YCR096C	ERG10	P41338	398 aa	Known RBP	0.06	□□□□□ -2.4
HMRA2	YCR096C	THG1	P53215	237 aa	Known RBP	0.06	□□□□□ -2.4
HMRA2	YCR096C	PDR17	P53844	350 aa		0.06	□□□□□ -2.4
HMRA2	YCR096C	DAD4	P69851	72 aa		0.06	□□□□□ -2.4
HMRA2	YCR096C	YMR099C	Q03161	297 aa	Known RBP	0.06	□□□□□ -2.4
HMRA2	YCR096C	YDR391C	Q04170	232 aa		0.06	□□□□□ -2.4
HMRA2	YCR096C	HNT1	Q04344	158 aa	Known RBP	0.06	□□□□□ -2.4
HMRA2	YCR096C	GGA1	Q06336	557 aa		0.06	□□□□□ -2.4
HMRA2	YCR096C	SEY1	Q99287	776 aa		0.06	□□□□□ -2.4
HMRA2	YCR096C	ODC2	Q99297	307 aa		0.06	□□□□□ -2.4
HMRA2	YCR096C	CDC36	P06100	191 aa	Predicted RBP	0.05	□□□□□ -2.4
HMRA2	YCR096C	PHO85	P17157	305 aa		0.05	□□□□□ -2.4
HMRA2	YCR096C	CKS1	P20486	150 aa	Known RBP	0.05	□□□□□ -2.4
HMRA2	YCR096C	MRPL15	P36523	253 aa		0.05	□□□□□ -2.4
HMRA2	YCR096C	YHL037C	P38733	133 aa		0.05	□□□□□ -2.4
HMRA2	YCR096C	GET1	P53192	235 aa		0.05	□□□□□ -2.4
HMRA2	YCR096C	YPR203W	Q08994	102 aa		0.05	□□□□□ -2.4
HMRA2	YCR096C	PST2	Q12335	198 aa	Known RBP	0.05	□□□□□ -2.4
HMRA2	YCR096C	JLP1	Q12358	412 aa		0.05	□□□□□ -2.4
HMRA2	YCR096C	TAR1	Q8TGM6	124 aa		0.05	□□□□□ -2.4
HMRA2	YCR096C	RPL25	P04456	142 aa	Known RBP	0.04	□□□□□ -2.4
HMRA2	YCR096C	YBR121C-A	P0C5L4	52 aa		0.04	□□□□□ -2.4
HMRA2	YCR096C	MAG1	P22134	296 aa	Known RBP	0.04	□□□□□ -2.4
HMRA2	YCR096C	RPL24B	P24000	155 aa	Known RBP	0.04	□□□□□ -2.4
HMRA2	YCR096C	YFL051C	P43552	160 aa		0.04	□□□□□ -2.4
HMRA2	YCR096C	AIM25	P47140	327 aa		0.04	□□□□□ -2.4
HMRA2	YCR096C	CWC23	P52868	283 aa	Predicted RBP	0.04	□□□□□ -2.4
HMRA2	YCR096C	MET31	Q03081	177 aa		0.04	□□□□□ -2.4
HMRA2	YCR096C	UPS3	Q04006	179 aa		0.04	□□□□□ -2.4

Retrieved 100 of 5,963 RNA–protein pairs in 69.2 ms