RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	AEP3	Q12089	606 aa		4.7	□□□□□ -1.66
ATG12	YBR217W	JID1	Q12350	301 aa		4.7	□□□□□ -1.66
ATG12	YBR217W	HEM13	P11353	328 aa	Known RBP	4.69	□□□□□ -1.66
ATG12	YBR217W	OLE1	P21147	510 aa	Known RBP	4.69	□□□□□ -1.66
ATG12	YBR217W	VMA8	P32610	256 aa	Known RBP	4.69	□□□□□ -1.66
ATG12	YBR217W	YKL102C	P34249	101 aa		4.69	□□□□□ -1.66
ATG12	YBR217W	LSM1	P47017	172 aa	Known RBP	4.69	□□□□□ -1.66
ATG12	YBR217W	UBP8	P50102	471 aa		4.69	□□□□□ -1.66
ATG12	YBR217W	CAB5	Q03941	241 aa		4.69	□□□□□ -1.66
ATG12	YBR217W	FEX2	Q08991	375 aa		4.69	□□□□□ -1.66
ATG12	YBR217W	RPL9A	P05738	191 aa	Known RBP	4.68	□□□□□ -1.66
ATG12	YBR217W	SPS18	P32572	300 aa		4.68	□□□□□ -1.66
ATG12	YBR217W	ECM31	P38122	312 aa		4.68	□□□□□ -1.66
ATG12	YBR217W	NOP16	P40007	231 aa	Known RBP	4.68	□□□□□ -1.66
ATG12	YBR217W	AIM20	P40451	204 aa		4.68	□□□□□ -1.66
ATG12	YBR217W	PUS4	P48567	403 aa	Known RBP	4.68	□□□□□ -1.66
ATG12	YBR217W	YDL186W	P48568	277 aa		4.68	□□□□□ -1.66
ATG12	YBR217W	RPL9B	P51401	191 aa	Known RBP	4.68	□□□□□ -1.66
ATG12	YBR217W	CRH1	P53301	507 aa		4.68	□□□□□ -1.66
ATG12	YBR217W	VBA1	Q04301	562 aa		4.68	□□□□□ -1.66
ATG12	YBR217W	MCH1	Q07376	486 aa		4.68	□□□□□ -1.66
ATG12	YBR217W	RAD52	P06778	471 aa	Known RBP	4.67	□□□□□ -1.66
ATG12	YBR217W	YER190C-B	P0CX94	160 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	YEL077W-A	P0CX95	160 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	YGR296C-B	P0CX96	160 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	YPL283W-B	P0CX97	160 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	YPR204C-A	P0CX98	160 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	YFL068W	P0CX99	160 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	YLL066W-A	P0CY00	160 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	YLL067W-A	P0CY01	160 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	NHP6B	P11633	99 aa	Known RBP	4.67	□□□□□ -1.66
ATG12	YBR217W	YMR31	P19955	123 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	YCR016W	P25617	290 aa	Known RBP	4.67	□□□□□ -1.66
ATG12	YBR217W	RAD23	P32628	398 aa	Known RBP	4.67	□□□□□ -1.66
ATG12	YBR217W	YNK1	P36010	153 aa	Known RBP	4.67	□□□□□ -1.66
ATG12	YBR217W	YBR242W	P38331	238 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	YFL054C	P43549	646 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	TAX4	P47030	604 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	GPG1	P53130	126 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	SMX3	P54999	86 aa	Predicted RBP	4.67	□□□□□ -1.66
ATG12	YBR217W	NGL2	Q03264	515 aa	Known RBP	4.67	□□□□□ -1.66
ATG12	YBR217W	HRD1	Q08109	551 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	FEX1	Q08913	375 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	BOL1	Q3E793	110 aa		4.67	□□□□□ -1.66
ATG12	YBR217W	QCR2	P07257	368 aa		4.66	□□□□□ -1.66
ATG12	YBR217W	FEN2	P25621	512 aa	Known RBP	4.66	□□□□□ -1.66
ATG12	YBR217W	NPL6	P32832	435 aa		4.66	□□□□□ -1.66
ATG12	YBR217W	YKR045C	P36138	183 aa		4.66	□□□□□ -1.66
ATG12	YBR217W	MRPL3	P36516	390 aa		4.66	□□□□□ -1.66
ATG12	YBR217W	LAG1	P38703	411 aa		4.66	□□□□□ -1.66
ATG12	YBR217W	YHR138C	P38841	114 aa	Predicted RBP	4.66	□□□□□ -1.66
ATG12	YBR217W	AGE2	P40529	298 aa		4.66	□□□□□ -1.66
ATG12	YBR217W	IRC24	P40580	263 aa		4.66	□□□□□ -1.66
ATG12	YBR217W	ARO8	P53090	500 aa	Known RBP	4.66	□□□□□ -1.66
ATG12	YBR217W	YDL086W	Q07505	273 aa		4.66	□□□□□ -1.66
ATG12	YBR217W	ATG5	Q12380	294 aa		4.66	□□□□□ -1.66
ATG12	YBR217W	TRM13	Q12383	476 aa		4.66	□□□□□ -1.66
ATG12	YBR217W	HTB1	P02293	131 aa	Known RBP	4.65	□□□□□ -1.67
ATG12	YBR217W	MRP17	P28778	131 aa		4.65	□□□□□ -1.67
ATG12	YBR217W	SRY1	P36007	326 aa		4.65	□□□□□ -1.67
ATG12	YBR217W	ICS2	P38284	255 aa		4.65	□□□□□ -1.67
ATG12	YBR217W	YJL213W	P40896	331 aa		4.65	□□□□□ -1.67
ATG12	YBR217W	NIF3	P53081	288 aa		4.65	□□□□□ -1.67
ATG12	YBR217W	SPG4	Q04438	115 aa		4.65	□□□□□ -1.67
ATG12	YBR217W	PRM4	Q12498	284 aa		4.65	□□□□□ -1.67
ATG12	YBR217W	YJR112W-A	Q3E743	109 aa		4.65	□□□□□ -1.67
ATG12	YBR217W	YBR255C-A	Q3E776	120 aa		4.65	□□□□□ -1.67
ATG12	YBR217W	YGR035W-A	Q45U48	73 aa		4.65	□□□□□ -1.67
ATG12	YBR217W	VPS63	O13549	108 aa		4.64	□□□□□ -1.67
ATG12	YBR217W	TPI1	P00942	248 aa	Known RBP	4.64	□□□□□ -1.67
ATG12	YBR217W	NOP1	P15646	327 aa	Known RBP	4.64	□□□□□ -1.67
ATG12	YBR217W	MRS4	P23500	304 aa		4.64	□□□□□ -1.67
ATG12	YBR217W	INO2	P26798	304 aa		4.64	□□□□□ -1.67
ATG12	YBR217W	PRY2	P36110	329 aa		4.64	□□□□□ -1.67
ATG12	YBR217W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
ATG12	YBR217W	YGR210C	P42942	411 aa		4.64	□□□□□ -1.67
ATG12	YBR217W	FIP1	P45976	327 aa		4.64	□□□□□ -1.67
ATG12	YBR217W	ARP3	P47117	449 aa	Known RBP	4.64	□□□□□ -1.67
ATG12	YBR217W	VPS28	Q02767	242 aa		4.64	□□□□□ -1.67
ATG12	YBR217W	NDE2	Q07500	545 aa		4.64	□□□□□ -1.67
ATG12	YBR217W	PAM18	Q07914	168 aa		4.64	□□□□□ -1.67
ATG12	YBR217W	YOL029C	Q08187	201 aa		4.64	□□□□□ -1.67
ATG12	YBR217W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.64	□□□□□ -1.67
ATG12	YBR217W	ARG80	P07249	177 aa		4.63	□□□□□ -1.67
ATG12	YBR217W	PRS4	P38063	326 aa	Predicted RBP	4.63	□□□□□ -1.67
ATG12	YBR217W	ATP3	P38077	311 aa	Known RBP	4.63	□□□□□ -1.67
ATG12	YBR217W	ERV15	P38312	142 aa		4.63	□□□□□ -1.67
ATG12	YBR217W	LSM12	P38828	187 aa	Known RBP	4.63	□□□□□ -1.67
ATG12	YBR217W	GPP2	P40106	250 aa	Known RBP	4.63	□□□□□ -1.67
ATG12	YBR217W	YJR012C	P47087	207 aa		4.63	□□□□□ -1.67
ATG12	YBR217W	MRPS16	Q02608	121 aa		4.63	□□□□□ -1.67
ATG12	YBR217W	YML122C	Q03207	126 aa		4.63	□□□□□ -1.67
ATG12	YBR217W	FSH2	Q05015	223 aa		4.63	□□□□□ -1.67
ATG12	YBR217W	YCT1	Q12235	531 aa		4.63	□□□□□ -1.67
ATG12	YBR217W	HBN1	Q96VH4	193 aa		4.63	□□□□□ -1.67
ATG12	YBR217W	PUT1	P09368	476 aa		4.62	□□□□□ -1.67
ATG12	YBR217W	URA5	P13298	226 aa	Known RBP	4.62	□□□□□ -1.67
ATG12	YBR217W	SUA5	P32579	426 aa		4.62	□□□□□ -1.67
ATG12	YBR217W	PHM8	P40025	321 aa		4.62	□□□□□ -1.67
ATG12	YBR217W	DFG10	P40526	253 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms