RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C YKR032WP36127 104 aa3.07□□□□□ -1.92
NPL4YBR170C DER1P38307 211 aa3.07□□□□□ -1.92
NPL4YBR170C MED6P38782 295 aa3.07□□□□□ -1.92
NPL4YBR170C YGR026WP53217 278 aa3.07□□□□□ -1.92
NPL4YBR170C SWP1Q02795 286 aa3.07□□□□□ -1.92
NPL4YBR170C YDR114CQ04597 100 aa3.07□□□□□ -1.92
NPL4YBR170C SHH4Q06236 168 aa3.07□□□□□ -1.92
NPL4YBR170C SUE1Q06524 206 aa3.07□□□□□ -1.92
NPL4YBR170C AKR2Q12013 749 aa3.07□□□□□ -1.92
NPL4YBR170C YLR053CQ12026 108 aa3.07□□□□□ -1.92
NPL4YBR170C NSL1Q12143 216 aa3.07□□□□□ -1.92
NPL4YBR170C CCA1P21269 546 aa3.07□□□□□ -1.92
NPL4YBR170C SEC14P24280 304 aaKnown RBP3.07□□□□□ -1.92
NPL4YBR170C EDC3P39998 551 aaKnown RBP3.07□□□□□ -1.92
NPL4YBR170C YFH7P43591 353 aa3.07□□□□□ -1.92
NPL4YBR170C YJR111CP47148 283 aaKnown RBP3.07□□□□□ -1.92
NPL4YBR170C YLR031WQ07978 186 aa3.07□□□□□ -1.92
NPL4YBR170C FEX1Q08913 375 aa3.07□□□□□ -1.92
NPL4YBR170C FEX2Q08991 375 aa3.07□□□□□ -1.92
NPL4YBR170C RDI1Q12434 202 aa3.07□□□□□ -1.92
NPL4YBR170C VMA11P32842 164 aa3.06□□□□□ -1.92
NPL4YBR170C SKI6P46948 246 aaPredicted RBP3.06□□□□□ -1.92
NPL4YBR170C GPI17Q04080 534 aa3.06□□□□□ -1.92
NPL4YBR170C HPT1Q04178 221 aaKnown RBP3.06□□□□□ -1.92
NPL4YBR170C DGA1Q08650 418 aa3.06□□□□□ -1.92
NPL4YBR170C CMD1P06787 147 aaKnown RBP3.05□□□□□ -1.92
NPL4YBR170C RPS28BP0C0X0 67 aaKnown RBP3.05□□□□□ -1.92
NPL4YBR170C SCO1P23833 295 aa3.05□□□□□ -1.92
NPL4YBR170C PGA1P53896 198 aa3.05□□□□□ -1.92
NPL4YBR170C RPS28AQ3E7X9 67 aaPredicted RBP3.05□□□□□ -1.92
NPL4YBR170C PET20Q99373 253 aa3.05□□□□□ -1.92
NPL4YBR170C CKS1P20486 150 aaKnown RBP3.05□□□□□ -1.92
NPL4YBR170C ATP15P21306 62 aa3.05□□□□□ -1.92
NPL4YBR170C ACP1P32463 125 aa3.05□□□□□ -1.92
NPL4YBR170C YKL102CP34249 101 aa3.05□□□□□ -1.92
NPL4YBR170C HSK3P69852 69 aa3.05□□□□□ -1.92
NPL4YBR170C HNT1Q04344 158 aaKnown RBP3.05□□□□□ -1.92
NPL4YBR170C MPD1Q12404 318 aaKnown RBP3.05□□□□□ -1.92
NPL4YBR170C ARR2Q06597 130 aa3.04□□□□□ -1.92
NPL4YBR170C MHT1Q12525 324 aa3.04□□□□□ -1.92
NPL4YBR170C TSC3Q3E790 80 aa3.04□□□□□ -1.92
NPL4YBR170C TIM9O74700 87 aa3.03□□□□□ -1.92
NPL4YBR170C KRE1P17260 313 aa3.03□□□□□ -1.92
NPL4YBR170C MRPS28P21771 286 aa3.03□□□□□ -1.92
NPL4YBR170C OCH1P31755 480 aa3.03□□□□□ -1.92
NPL4YBR170C SBH2P52871 88 aa3.03□□□□□ -1.92
NPL4YBR170C AIF1P52923 378 aa3.03□□□□□ -1.92
NPL4YBR170C PLP1Q04004 230 aa3.03□□□□□ -1.92
NPL4YBR170C RRP17Q04031 235 aaPredicted RBP3.03□□□□□ -1.92
NPL4YBR170C DYN3Q04949 312 aa3.03□□□□□ -1.92
NPL4YBR170C IES4Q08561 116 aa3.03□□□□□ -1.92
NPL4YBR170C RSA4P25382 515 aaKnown RBP3.02□□□□□ -1.93
NPL4YBR170C TVP38P36164 337 aa3.02□□□□□ -1.93
NPL4YBR170C MRPL17P36528 281 aa3.02□□□□□ -1.93
NPL4YBR170C PRM10P42946 383 aa3.02□□□□□ -1.93
NPL4YBR170C SPG3Q04398 127 aaPredicted RBP3.02□□□□□ -1.93
NPL4YBR170C YPR014CQ6B0W2 109 aa3.02□□□□□ -1.93
NPL4YBR170C MSW1P04803 379 aa3.02□□□□□ -1.93
NPL4YBR170C SCM4P32564 187 aa3.02□□□□□ -1.93
NPL4YBR170C TDA4P47153 279 aa3.02□□□□□ -1.93
NPL4YBR170C DSK2P48510 373 aa3.02□□□□□ -1.93
NPL4YBR170C YDC1Q02896 317 aa3.02□□□□□ -1.93
NPL4YBR170C YPR195CQ06594 109 aa3.02□□□□□ -1.93
NPL4YBR170C YCR023CP25351 611 aa3.01□□□□□ -1.93
NPL4YBR170C SRP102P36057 244 aaPredicted RBP3.01□□□□□ -1.93
NPL4YBR170C AIM2P39721 246 aa3.01□□□□□ -1.93
NPL4YBR170C SER2P42941 309 aa3.01□□□□□ -1.93
NPL4YBR170C COS6P53344 381 aa3.01□□□□□ -1.93
NPL4YBR170C FMT1P32785 401 aa3□□□□□ -1.93
NPL4YBR170C MNN5P46982 586 aa3□□□□□ -1.93
NPL4YBR170C LSM1P47017 172 aaKnown RBP3□□□□□ -1.93
NPL4YBR170C YGL088WP53151 121 aa3□□□□□ -1.93
NPL4YBR170C NQM1P53228 333 aaPredicted RBP3□□□□□ -1.93
NPL4YBR170C YPR127WQ06494 345 aa3□□□□□ -1.93
NPL4YBR170C OPY1P38271 328 aa2.99□□□□□ -1.93
NPL4YBR170C GVP36P40531 326 aaKnown RBP2.99□□□□□ -1.93
NPL4YBR170C SNX4P47057 423 aa2.99□□□□□ -1.93
NPL4YBR170C MPA43P53583 542 aaPredicted RBP2.99□□□□□ -1.93
NPL4YBR170C YDR274CP87283 123 aa2.99□□□□□ -1.93
NPL4YBR170C MAK3Q03503 176 aa2.99□□□□□ -1.93
NPL4YBR170C YOL014WQ08110 124 aa2.99□□□□□ -1.93
NPL4YBR170C RPL26AP05743 127 aaKnown RBP2.99□□□□□ -1.93
NPL4YBR170C MDH3P32419 343 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
NPL4YBR170C YHR180WP38868 163 aa2.99□□□□□ -1.93
NPL4YBR170C YEA4P40004 342 aa2.99□□□□□ -1.93
NPL4YBR170C GPI14P47088 403 aaKnown RBP2.99□□□□□ -1.93
NPL4YBR170C SOL1P50278 321 aa2.99□□□□□ -1.93
NPL4YBR170C RPL26BP53221 127 aaKnown RBP2.99□□□□□ -1.93
NPL4YBR170C NEJ1Q06148 342 aa2.99□□□□□ -1.93
NPL4YBR170C YDL012CQ12489 107 aa2.99□□□□□ -1.93
NPL4YBR170C EFG1Q3E705 233 aaKnown RBP2.99□□□□□ -1.93
NPL4YBR170C YML100W-AQ8TGT0 57 aa2.99□□□□□ -1.93
NPL4YBR170C PDR18P53756 1333 aa2.98□□□□□ -1.93
NPL4YBR170C SPO13P23624 291 aa2.98□□□□□ -1.93
NPL4YBR170C SLM6P38343 150 aa2.98□□□□□ -1.93
NPL4YBR170C YHL026CP38740 315 aa2.98□□□□□ -1.93
NPL4YBR170C RFC2P40348 353 aa2.98□□□□□ -1.93
NPL4YBR170C PGD1P40356 397 aa2.98□□□□□ -1.93
NPL4YBR170C YJR146WP47174 117 aa2.98□□□□□ -1.93
NPL4YBR170C MIG1P27705 504 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms