RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 GOLPH3Q9H4A6 298 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 COG5Q9UP83 839 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 STXBP5LQ9Y2K9 1186 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 CENPFP49454 3210 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 TRIP11Q15643 1979 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 THAP12O43422 761 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 CD58P19256 250 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 HES6Q96HZ4 224 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 PARD6BQ9BYG5 372 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 XPNPEP3Q9NQH7 507 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 M0QZ92 97 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 KCNK3O14649 394 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 ADAMTS4O75173 837 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 PRKAR2AP13861 404 aaKnown RBP17.55■□□□□ 0.4
PHGDH-216ENST00000641375 DNA2P51530 1060 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 TRIM32Q13049 653 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 NBPF20Q3BBV1 942 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 CCDC70Q6NSX1 233 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 ZNF771Q7L3S4 317 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-216ENST00000641375 RSPH3Q86UC2 560 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 SPATA4Q8NEY3 305 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 CXorf38Q8TB03 319 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 TMEM40Q8WWA1 233 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 ZNF606Q8WXB4 792 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 BCO2Q9BYV7 579 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 FAM124BQ9H5Z6 455 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-216ENST00000641375 ANKZF1Q9H8Y5 726 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 RNF186Q9NXI6 227 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 DPP3Q9NY33 737 aa17.55■□□□□ 0.4
PHGDH-216ENST00000641375 NXF1Q9UBU9 619 aaKnown RBP17.55■□□□□ 0.4
PHGDH-216ENST00000641375 PIN4Q9Y237 131 aaKnown RBP17.55■□□□□ 0.4
PHGDH-216ENST00000641375 CALCAP01258 141 aa17.54■□□□□ 0.4
PHGDH-216ENST00000641375 WEE2P0C1S8 567 aa17.54■□□□□ 0.4
PHGDH-216ENST00000641375 RBP5P82980 135 aa17.54■□□□□ 0.4
PHGDH-216ENST00000641375 MCOLN2Q8IZK6 566 aa17.54■□□□□ 0.4
PHGDH-216ENST00000641375 CYFIP2Q96F07 1278 aa17.54■□□□□ 0.4
PHGDH-216ENST00000641375 KIF12Q96FN5 646 aa17.54■□□□□ 0.4
PHGDH-216ENST00000641375 VCPIP1Q96JH7 1222 aa17.54■□□□□ 0.4
PHGDH-216ENST00000641375 NUP85Q9BW27 656 aa17.54■□□□□ 0.4
PHGDH-216ENST00000641375 CELF4Q9BZC1 486 aaKnown RBP17.54■□□□□ 0.4
PHGDH-216ENST00000641375 EPC1Q9H2F5 836 aa17.54■□□□□ 0.4
PHGDH-216ENST00000641375 SNTG2Q9NY99 539 aa17.54■□□□□ 0.4
PHGDH-216ENST00000641375 SRRDQ9UH36 339 aa17.54■□□□□ 0.4
PHGDH-216ENST00000641375 SPDYE4A6NLX3 237 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 STAU1O95793 577 aaKnown RBP17.53■□□□□ 0.4
PHGDH-216ENST00000641375 APLP1P51693 650 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 SCARA5Q6ZMJ2 495 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 ZNF564Q8TBZ8 553 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-216ENST00000641375 SNX27Q96L92 541 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 EIF2AQ9BY44 585 aaKnown RBP17.53■□□□□ 0.4
PHGDH-216ENST00000641375 CYP3A43Q9HB55 503 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 AVENQ9NQS1 362 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-216ENST00000641375 CNOT8Q9UFF9 292 aaKnown RBP17.53■□□□□ 0.4
PHGDH-216ENST00000641375 FAM170AA1A519 330 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 RHOXF2BP0C7M4 288 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 CST5P28325 142 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-216ENST00000641375 POLR2BP30876 1174 aaKnown RBP17.53■□□□□ 0.4
PHGDH-216ENST00000641375 CAP1Q01518 475 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 NAA35Q5VZE5 725 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 MMGT1Q8N4V1 131 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 CPA5Q8WXQ8 436 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 HPDLQ96IR7 371 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 RPS6KC1Q96S38 1066 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 TSPAN18Q96SJ8 248 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 RHOXF2Q9BQY4 288 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 AGAP1Q9UPQ3 857 aa17.53■□□□□ 0.4
PHGDH-216ENST00000641375 ATMINO43313 823 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-216ENST00000641375 TRPA1O75762 1119 aa17.52■□□□□ 0.4
PHGDH-216ENST00000641375 LSM8O95777 96 aaKnown RBP17.52■□□□□ 0.4
PHGDH-216ENST00000641375 GNRH1P01148 92 aa17.52■□□□□ 0.4
PHGDH-216ENST00000641375 HMGCRP04035 888 aa17.52■□□□□ 0.4
PHGDH-216ENST00000641375 ELNP15502 786 aa17.52■□□□□ 0.4
PHGDH-216ENST00000641375 CCND3P30281 292 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-216ENST00000641375 NOMO3P69849 1222 aa17.52■□□□□ 0.4
PHGDH-216ENST00000641375 MRPS6P82932 125 aaKnown RBP17.52■□□□□ 0.4
PHGDH-216ENST00000641375 SESTD1Q86VW0 696 aa17.52■□□□□ 0.4
PHGDH-216ENST00000641375 TTC39CQ8N584 583 aa17.52■□□□□ 0.4
PHGDH-216ENST00000641375 PCSK9Q8NBP7 692 aaKnown RBP17.52■□□□□ 0.4
PHGDH-216ENST00000641375 POLIQ9UNA4 740 aa17.52■□□□□ 0.4
PHGDH-216ENST00000641375 ALG6Q9Y672 507 aa17.52■□□□□ 0.4
PHGDH-216ENST00000641375 TARSL2A2RTX5 802 aaKnown RBP17.52■□□□□ 0.39
PHGDH-216ENST00000641375 CCDC66A2RUB6 948 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 MIF4GDA9UHW6 222 aaKnown RBP17.52■□□□□ 0.39
PHGDH-216ENST00000641375 ASGR1P07306 291 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 MCM3P25205 808 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 MAP2K2P36507 400 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 CLCN6P51797 869 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 C2orf54Q08AI8 447 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 MYO1EQ12965 1108 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 BRD3Q15059 726 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 FAM47CQ5HY64 1035 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 LIN9Q5TKA1 542 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 MON1BQ7L1V2 547 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 PHF13Q86YI8 300 aaPredicted RBP17.52■□□□□ 0.39
PHGDH-216ENST00000641375 KLHDC9Q8NEP7 349 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 ACTRT1Q8TDG2 376 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 MS4A14Q96JA4 679 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 ZNF518BQ9C0D4 1074 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 CNTN3Q9P232 1028 aa17.52■□□□□ 0.39
PHGDH-216ENST00000641375 RAB21Q9UL25 225 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms