RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ZBED4O75132 1171 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 SCNN1DP51172 638 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 ZC3H12AQ5D1E8 599 aaKnown RBP15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 HAUS6Q7Z4H7 955 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 GALNT15Q8N3T1 639 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 SUPT20HQ8NEM7 779 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 FAM136AQ96C01 138 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 SYT15Q9BQS2 421 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 TIPINQ9BVW5 301 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 ETAA1Q9NY74 926 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 ANKFY1Q9P2R3 1169 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 PSMC3IPQ9P2W1 217 aaPredicted RBP15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 SCOCQ9UIL1 159 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 EXOC7Q9UPT5 735 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 HOXA10P31260 410 aaPredicted RBP15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 GTF2H1P32780 548 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 SNRNP35Q16560 246 aaKnown RBP15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 GNPTABQ3T906 1256 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 PRUNE1Q86TP1 453 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 TMC2Q8TDI7 906 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 NMRK1Q9NWW6 199 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 RAB20Q9NX57 234 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 FETUBQ9UGM5 382 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 GRID1Q9ULK0 1009 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 PRR12Q9ULL5 1215 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 SYNPO2Q9UMS6 1093 aa15.67■□□□□ 0.1
CACNA1A-220ENST00000635988 ADRB2P07550 413 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 FDX1P10109 184 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 GNAT1P11488 350 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 KRT5P13647 590 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 SP100P23497 879 aaPredicted RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 GCLCP48506 637 aaPredicted RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 INHBEP58166 350 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 MORF4L2Q15014 288 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 SLC1A5Q15758 541 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 ABCB5Q2M3G0 1257 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 LIN9Q5TKA1 542 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 DRICH1Q6PGQ1 229 aaPredicted RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 AMIGO3Q86WK7 504 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 C4orf33Q8N1A6 199 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 BTBD10Q9BSF8 475 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 VPS37BQ9H9H4 285 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 EIF4E1BA6NMX2 242 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 IPO5O00410 1097 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 ALOX15BO15296 676 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 P4HBP07237 508 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 VIL1P09327 827 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 NSFP46459 744 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 BPIFB4P59827 614 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 GCNT1Q02742 428 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 SEPT7Q16181 437 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 CTC1Q2NKJ3 1217 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 LVRNQ6Q4G3 990 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 MTDHQ86UE4 582 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 ZFPM1Q8IX07 1006 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 OGFOD1Q8N543 542 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 TRAPPC9Q96Q05 1148 aa15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 MRPL47Q9HD33 250 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.66■□□□□ 0.1
CACNA1A-220ENST00000635988 SPDYE5A6NIY4 337 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 RIMBP2O15034 1052 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 ZC3H11AO75152 810 aaKnown RBP eCLIP15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 SLURP2P0DP57 97 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 AOC3Q16853 763 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 CCDC142Q17RM4 750 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 CENPUQ71F23 418 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 PPFIBP2Q8ND30 876 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 MMADHCQ9H3L0 296 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 NPHS2Q9NP85 383 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 DLGAP2Q9P1A6 1054 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 PCDHB2Q9Y5E7 798 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 FAM196BA6NMK8 535 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 HAUS5O94927 633 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 ARP10275 920 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 TAL1P17542 331 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 SHROOM1Q2M3G4 852 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 KHDC1Q4VXA5 237 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 SNX30Q5VWJ9 437 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 CCDC174Q6PII3 467 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 MIER3Q7Z3K6 550 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 CCDC127Q96BQ5 260 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 ALKBH8Q96BT7 664 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 CADM1Q9BY67 442 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 ZC3H12CQ9C0D7 883 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 RBBP6Q7Z6E9 1792 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 UMODL1Q5DID0 1318 aa15.65■□□□□ 0.1
CACNA1A-220ENST00000635988 GOLGA8IPA6NC78 632 aa15.64■□□□□ 0.09
CACNA1A-220ENST00000635988 SIGLEC16A6NMB1 481 aa15.64■□□□□ 0.09
CACNA1A-220ENST00000635988 GOLGA8JA6NMD2 632 aa15.64■□□□□ 0.09
CACNA1A-220ENST00000635988 TM9SF1O15321 606 aa15.64■□□□□ 0.09
CACNA1A-220ENST00000635988 SLC34A1Q06495 639 aa15.64■□□□□ 0.09
CACNA1A-220ENST00000635988 ENPEPQ07075 957 aa15.64■□□□□ 0.09
CACNA1A-220ENST00000635988 EAPPQ56P03 285 aaPredicted RBP15.64■□□□□ 0.09
CACNA1A-220ENST00000635988 CBWD2Q8IUF1 395 aa15.64■□□□□ 0.09
CACNA1A-220ENST00000635988 SP8Q8IXZ3 490 aa15.64■□□□□ 0.09
CACNA1A-220ENST00000635988 ZDHHC15Q96MV8 337 aa15.64■□□□□ 0.09
CACNA1A-220ENST00000635988 MIPEPQ99797 713 aa15.64■□□□□ 0.09
CACNA1A-220ENST00000635988 TRIM55Q9BYV6 548 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms