RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 DEF6Q9H4E7 631 aa13.36□□□□□ -0.27
TNFAIP3-211ENST00000621150 PDE11AQ9HCR9 933 aa13.36□□□□□ -0.27
TNFAIP3-211ENST00000621150 XIRP2A4UGR9 3374 aa13.36□□□□□ -0.27
TNFAIP3-211ENST00000621150 PTPRSQ13332 1948 aa13.36□□□□□ -0.27
TNFAIP3-211ENST00000621150 INO80B-WBP1J3KQ70 363 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 FOXN3O00409 490 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 DDX3XO00571 662 aaKnown RBP eCLIP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 IPO7O95373 1038 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 VNN1O95497 513 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 VTNP04004 478 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 DLATP10515 647 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 TNFSF9P41273 254 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 PRPF4BQ13523 1007 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 PTGISQ16647 500 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 KIAA0753Q2KHM9 967 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 CCDC122Q5T0U0 273 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 ATF7IP2Q5U623 682 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 TDRD10Q5VZ19 366 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 DEFB128Q7Z7B8 93 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 ZNF410Q86VK4 478 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 FMNL3Q8IVF7 1028 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 SLC35F6Q8N357 371 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 KAT5Q92993 513 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 ZNF668Q96K58 619 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 FAM84AQ96KN4 292 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 TSGA10Q9BZW7 698 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 INO80BQ9C086 356 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 CDT1Q9H211 546 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 UBE2TQ9NPD8 197 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 SETD4Q9NVD3 440 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 ADAMTS1Q9UHI8 967 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 NOD1Q9Y239 953 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 DUSP10Q9Y6W6 482 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 MEFVO15553 781 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 KRT86O43790 486 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 PFKMP08237 780 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 FOSL2P15408 326 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 MAGEA1P43355 309 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 PSEN2P49810 448 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 POU5F1Q01860 360 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 GCNT1Q02742 428 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 ARID5AQ03989 594 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 BMS1Q14692 1282 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 TSNAXIP1Q2TAA8 658 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 ZNF569Q5MCW4 686 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 KIAA1328Q86T90 577 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 FAM71AQ8IYT1 594 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 MAFAQ8NHW3 353 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 LNX1Q8TBB1 728 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 HDAC6Q9UBN7 1215 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 GTF2IRD1Q9UHL9 959 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 SALL4Q9UJQ4 1053 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 NAGPAQ9UK23 515 aa13.35□□□□□ -0.27
TNFAIP3-211ENST00000621150 SMIM35A0A1B0GVV1 85 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 BTNL10A8MVZ5 291 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 GPR32O75388 356 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 CASQ1P31415 396 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 RFC2P35250 354 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 AMPD2Q01433 879 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 KIF5AQ12840 1032 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 BFSP2Q13515 415 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 SEZ6Q53EL9 994 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 LMBRD2Q68DH5 695 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 SRGAP1Q7Z6B7 1085 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 WDR49Q8IV35 697 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 C7orf31Q8N865 590 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 OR5B17Q8NGF7 314 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 FAM174AQ8TBP5 190 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 FNBP1Q96RU3 617 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 KATNAL1Q9BW62 490 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 PDZD7Q9H5P4 517 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 GUCA1BQ9UMX6 200 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 AKT3Q9Y243 479 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 SLC4A7Q9Y6M7 1214 aa13.34□□□□□ -0.27
TNFAIP3-211ENST00000621150 MUC3AQ02505 3323 aa13.33□□□□□ -0.27
TNFAIP3-211ENST00000621150 UQCRHLA0A096LP55 91 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 ZBBXA8MT70 800 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 DLL1O00548 723 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 TSPAN1O60635 241 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 HLA-DRAP01903 254 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 UQCRHP07919 91 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 ARF4P18085 180 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 AP3M2P53677 418 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 NAB2Q15742 525 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 RAB30Q15771 203 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 ENOX2Q16206 610 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 ARHGAP44Q17R89 818 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 C10orf76Q5T2E6 689 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 ZBTB33Q86T24 672 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 CEP120Q8N960 986 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 CAGE1Q8TC20 777 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 DHX38Q92620 1227 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 TATDN2Q93075 761 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 NT5C1BQ96P26 610 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 MAP7D2Q96T17 732 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 MSRAQ9UJ68 235 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 YBX2Q9Y2T7 364 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 MRFAP1Q9Y605 127 aa13.33□□□□□ -0.28
TNFAIP3-211ENST00000621150 A0A1B0GUA9 196 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms