RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 BICD1Q96G01 975 aa21.62■■□□□ 1.05
NEK3-208ENST00000618534 TMEM39BQ9GZU3 492 aa21.62■■□□□ 1.05
NEK3-208ENST00000618534 RAVER2Q9HCJ3 691 aaKnown RBP21.62■■□□□ 1.05
NEK3-208ENST00000618534 ZSCAN5DPP0CG00 497 aa21.61■■□□□ 1.05
NEK3-208ENST00000618534 WNT7BP56706 349 aa21.61■■□□□ 1.05
NEK3-208ENST00000618534 HP1BP3Q5SSJ5 553 aaPredicted RBP21.61■■□□□ 1.05
NEK3-208ENST00000618534 OGFOD1Q8N543 542 aa21.61■■□□□ 1.05
NEK3-208ENST00000618534 EXD1Q8NHP7 514 aa21.61■■□□□ 1.05
NEK3-208ENST00000618534 SPIRE2Q8WWL2 714 aa21.61■■□□□ 1.05
NEK3-208ENST00000618534 CFAP57Q96MR6 1250 aa21.61■■□□□ 1.05
NEK3-208ENST00000618534 PI4K2BG5E9Z4 385 aa21.61■■□□□ 1.05
NEK3-208ENST00000618534 NOMO3P69849 1222 aa21.61■■□□□ 1.05
NEK3-208ENST00000618534 ATP11AP98196 1134 aa21.61■■□□□ 1.05
NEK3-208ENST00000618534 FASTKD3Q14CZ7 662 aaKnown RBP21.61■■□□□ 1.05
NEK3-208ENST00000618534 MEX3CQ5U5Q3 659 aaKnown RBP21.61■■□□□ 1.05
NEK3-208ENST00000618534 KAZNQ674X7 775 aa21.61■■□□□ 1.05
NEK3-208ENST00000618534 ERP27Q96DN0 273 aa21.61■■□□□ 1.05
NEK3-208ENST00000618534 NTPCRQ9BSD7 190 aaKnown RBP21.61■■□□□ 1.05
NEK3-208ENST00000618534 POC1B-GALNT4F8VUJ3 575 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 HLA-DRAP01903 254 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 KRT10P13645 584 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 SFNP31947 248 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 POLGP54098 1239 aaPredicted RBP21.6■■□□□ 1.05
NEK3-208ENST00000618534 BPIFB4P59827 614 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 RPS6P62753 249 aaKnown RBP21.6■■□□□ 1.05
NEK3-208ENST00000618534 ATP13A4Q4VNC1 1196 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 CEP170P1Q96L14 293 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 ZNF341Q9BYN7 854 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 KIAA1586Q9HCI6 787 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 SLCO1B3Q9NPD5 702 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 TXLNGQ9NUQ3 528 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 DNPEPQ9ULA0 475 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 PHTF1Q9UMS5 762 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 STARD13Q9Y3M8 1113 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 TESPA1A2RU30 521 aaPredicted RBP21.6■■□□□ 1.05
NEK3-208ENST00000618534 H0YIN7 160 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 CHRNA5P30532 468 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 KRT76Q01546 638 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 GHRHRQ02643 423 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 PKN2Q16513 984 aaKnown RBP21.6■■□□□ 1.05
NEK3-208ENST00000618534 WDR44Q5JSH3 913 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 CAPN12Q6ZSI9 719 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 TAS1R3Q7RTX0 852 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 SAMD3Q8N6K7 520 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 DENND1AQ8TEH3 1009 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 TRABDQ9H4I3 376 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 GRID1Q9ULK0 1009 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 CHKBQ9Y259 395 aa21.6■■□□□ 1.05
NEK3-208ENST00000618534 DNALI1O14645 258 aaPredicted RBP21.59■■□□□ 1.05
NEK3-208ENST00000618534 MAGEB2O15479 319 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 LIASO43766 372 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 ETS1P14921 441 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 TCF4P15884 667 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 ACO1P21399 889 aaKnown RBP21.59■■□□□ 1.05
NEK3-208ENST00000618534 GARTP22102 1010 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 PIK3CAP42336 1068 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 NFX1Q12986 1120 aaKnown RBP21.59■■□□□ 1.05
NEK3-208ENST00000618534 DLGAP5Q15398 846 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 TDRD10Q5VZ19 366 aaKnown RBP21.59■■□□□ 1.05
NEK3-208ENST00000618534 C4orf33Q8N1A6 199 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 FOXP3Q9BZS1 431 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 MRPL47Q9HD33 250 aaKnown RBP21.59■■□□□ 1.05
NEK3-208ENST00000618534 TLR3O15455 904 aaKnown RBP21.59■■□□□ 1.05
NEK3-208ENST00000618534 ZNF862O60290 1169 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 PECAM1P16284 738 aaPredicted RBP21.59■■□□□ 1.05
NEK3-208ENST00000618534 ATP2A2P16615 1042 aaKnown RBP21.59■■□□□ 1.05
NEK3-208ENST00000618534 PAX7P23759 505 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 ZACNQ401N2 412 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 PLEKHA7Q6IQ23 1121 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 STYK1Q6J9G0 422 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 VSIG1Q86XK7 387 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 TMEM237Q96Q45 408 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 RAB3IPQ96QF0 476 aaPredicted RBP21.59■■□□□ 1.05
NEK3-208ENST00000618534 SLC5A4Q9NY91 659 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 PTPRJQ12913 1337 aa21.59■■□□□ 1.05
NEK3-208ENST00000618534 PRPF4O43172 522 aaKnown RBP eCLIP21.58■■□□□ 1.05
NEK3-208ENST00000618534 TNNI1P19237 187 aa21.58■■□□□ 1.05
NEK3-208ENST00000618534 TARSP26639 723 aaKnown RBP21.58■■□□□ 1.05
NEK3-208ENST00000618534 NR1H3Q13133 447 aa21.58■■□□□ 1.05
NEK3-208ENST00000618534 DGKZQ13574 1117 aa21.58■■□□□ 1.05
NEK3-208ENST00000618534 MOGSQ13724 837 aa21.58■■□□□ 1.05
NEK3-208ENST00000618534 SPARCL1Q14515 664 aa21.58■■□□□ 1.05
NEK3-208ENST00000618534 SETDB1Q15047 1291 aa21.58■■□□□ 1.05
NEK3-208ENST00000618534 BRDTQ58F21 947 aaPredicted RBP21.58■■□□□ 1.05
NEK3-208ENST00000618534 BZW1Q7L1Q6 419 aaKnown RBP21.58■■□□□ 1.05
NEK3-208ENST00000618534 ABRAQ8N0Z2 381 aa21.58■■□□□ 1.05
NEK3-208ENST00000618534 PDCD2LQ9BRP1 358 aa21.58■■□□□ 1.05
NEK3-208ENST00000618534 UBN1Q9NPG3 1134 aa21.58■■□□□ 1.05
NEK3-208ENST00000618534 ZNF148Q9UQR1 794 aa21.58■■□□□ 1.05
NEK3-208ENST00000618534 ATF7P17544 494 aaPredicted RBP21.58■■□□□ 1.04
NEK3-208ENST00000618534 KRT15P19012 456 aa21.58■■□□□ 1.04
NEK3-208ENST00000618534 GNA15P30679 374 aa21.58■■□□□ 1.04
NEK3-208ENST00000618534 YARSP54577 528 aaKnown RBP21.58■■□□□ 1.04
NEK3-208ENST00000618534 ZFYVE27Q5T4F4 411 aa21.58■■□□□ 1.04
NEK3-208ENST00000618534 TMEM270Q6UE05 265 aa21.58■■□□□ 1.04
NEK3-208ENST00000618534 CEP128Q6ZU80 1094 aa21.58■■□□□ 1.04
NEK3-208ENST00000618534 RMDN3Q96TC7 470 aa21.58■■□□□ 1.04
NEK3-208ENST00000618534 APOBEC3GQ9HC16 384 aaKnown RBP21.58■■□□□ 1.04
NEK3-208ENST00000618534 GABBR1Q9UBS5 961 aa21.58■■□□□ 1.04
NEK3-208ENST00000618534 PCDHB4Q9Y5E5 795 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms