RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, human

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSA-215	ENST00000607187	POMGNT1	Q8WZA1	660 aa		10.84	□□□□□ -0.67
CTSA-215	ENST00000607187	HPS3	Q969F9	1004 aa		10.84	□□□□□ -0.67
CTSA-215	ENST00000607187	NECTIN4	Q96NY8	510 aa		10.84	□□□□□ -0.67
CTSA-215	ENST00000607187	CLSTN3	Q9BQT9	956 aa		10.84	□□□□□ -0.67
CTSA-215	ENST00000607187	MAN1C1	Q9NR34	630 aa		10.84	□□□□□ -0.67
CTSA-215	ENST00000607187	KIAA1468	Q9P260	1216 aa		10.84	□□□□□ -0.67
CTSA-215	ENST00000607187	DPP7	Q9UHL4	492 aa		10.84	□□□□□ -0.67
CTSA-215	ENST00000607187	UBQLN1	Q9UMX0	589 aa	Known RBP	10.84	□□□□□ -0.67
CTSA-215	ENST00000607187	FAM237A	A0A1B0GTK4	181 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187		A0A1B0GVL5	298 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	PI4K2B	G5E9Z4	385 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	SYN3	O14994	580 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	ADAM12	O43184	909 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	TGM5	O43548	720 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	XPOT	O43592	962 aa	Known RBP	10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	ACTN4	O43707	911 aa	Known RBP	10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	PAPLN	O95428	1278 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	WEE2	P0C1S8	567 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	SLFN14	P0C7P3	912 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	PFKFB1	P16118	471 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	TKT	P29401	623 aa	Known RBP	10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	CASP1	P29466	404 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	MTHFR	P42898	656 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	ATAT1	Q5SQI0	421 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	JADE1	Q6IE81	842 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	ELMSAN1	Q6PJG2	1045 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	TMC5	Q6UXY8	1006 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	C15orf39	Q6ZRI6	1047 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	STXBP4	Q6ZWJ1	553 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	UNC13D	Q70J99	1090 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	EPM2AIP1	Q7L775	607 aa	Predicted RBP	10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	GPR149	Q86SP6	731 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	PALB2	Q86YC2	1186 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	GLYCTK	Q8IVS8	523 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	CEP57L1	Q8IYX8	460 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	SYCP3	Q8IZU3	236 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	TMEM130	Q8N3G9	435 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	GLIS3	Q8NEA6	775 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	FEZF2	Q8TBJ5	459 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	RIPOR3	Q96MK2	946 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	RHOBTB2	Q9BYZ6	727 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	BLZF1	Q9H2G9	400 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	PLEKHA4	Q9H4M7	779 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	POMK	Q9H5K3	350 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	ASB7	Q9H672	318 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	EPHX3	Q9H6B9	360 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	TMEM206	Q9H813	350 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	MTRR	Q9UBK8	725 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	USP25	Q9UHP3	1055 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	HPSE	Q9Y251	543 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	DERA	Q9Y315	318 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	C2CD2	Q9Y426	696 aa		10.83	□□□□□ -0.68
CTSA-215	ENST00000607187	NOTCH4	Q99466	2003 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	PVALEF	A0A1B0GWK0	134 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	EIF3D	O15371	548 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	NFIC	P08651	508 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	SPATA31D3	P0C874	917 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	GART	P22102	1010 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	HOXD13	P35453	343 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	AFM	P43652	599 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	AARS	P49588	968 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	NUCB2	P80303	420 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	CUL4B	Q13620	913 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	RAB33A	Q14088	237 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	TMEM132D	Q14C87	1099 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	FAM26F	Q5R3K3	315 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	VARS2	Q5ST30	1063 aa	Known RBP	10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	SPATA1	Q5VX52	437 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	CYP26C1	Q6V0L0	522 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	SPATA31D4	Q6ZUB0	917 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	ANKS3	Q6ZW76	656 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	RNF135	Q8IUD6	432 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	ZSWIM2	Q8NEG5	633 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	ZNF507	Q8TCN5	953 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	PAGE5	Q96GU1	130 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	RPGRIP1	Q96KN7	1286 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	SUSD3	Q96L08	255 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	SERTAD1	Q9UHV2	236 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	FBXW11	Q9UKB1	542 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	NUB1	Q9Y5A7	615 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	BACE2	Q9Y5Z0	518 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	TECTA	O75443	2155 aa		10.82	□□□□□ -0.68
CTSA-215	ENST00000607187	TSC2	P49815	1807 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187	WDFY4	Q6ZS81	3184 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187	CCDC195	A0A1B0GUA6	201 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187		A0A1W2PQ27	194 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187		A0A1W2PQ64	194 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187		A0A1W2PQD8	194 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187		M0QZQ0	153 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187	EXTL3	O43909	919 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187	TBC1D4	O60343	1298 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187	RFPL2	O75678	378 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187	IL18RAP	O95256	599 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187	LDHA	P00338	332 aa	Known RBP	10.81	□□□□□ -0.68
CTSA-215	ENST00000607187	ALAD	P13716	330 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187	MCM4	P33991	863 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187	OR1D2	P34982	312 aa		10.81	□□□□□ -0.68
CTSA-215	ENST00000607187	SYK	P43405	635 aa		10.81	□□□□□ -0.68

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