RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 ZNF286BP0CG31 522 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 P4HA1P13674 534 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 RWDD2BP57060 319 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 INHBEP58166 350 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 MYL6P60660 151 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 NOMO3P69849 1222 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 DHX34Q14147 1143 aaKnown RBP12.01□□□□□ -0.49
LIG3-204ENST00000585740 AMHR2Q16671 573 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 DCAF4L1Q3SXM0 396 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 SEZ6Q53EL9 994 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 GJC2Q5T442 439 aaPredicted RBP12.01□□□□□ -0.49
LIG3-204ENST00000585740 NAA35Q5VZE5 725 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 ALS2CLQ60I27 953 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 SND1Q7KZF4 910 aaKnown RBP eCLIP12.01□□□□□ -0.49
LIG3-204ENST00000585740 RASAL3Q86YV0 1011 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 EFCAB13Q8IY85 973 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 NPLOC4Q8TAT6 608 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 HDAC7Q8WUI4 952 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 NLRP7Q8WX94 980 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 CD101Q93033 1021 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 PKNOX2Q96KN3 472 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 RAB17Q9H0T7 212 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 PDZD7Q9H5P4 517 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 FAM114A2Q9NRY5 505 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 RASAL2Q9UJF2 1139 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 MTUS1Q9ULD2 1270 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.01□□□□□ -0.49
LIG3-204ENST00000585740 CEP83Q9Y592 693 aa12.01□□□□□ -0.49
LIG3-204ENST00000585740 DOCK3Q8IZD9 2030 aa12□□□□□ -0.49
LIG3-204ENST00000585740 GPR25O00155 361 aa12□□□□□ -0.49
LIG3-204ENST00000585740 MYO1FO00160 1098 aa12□□□□□ -0.49
LIG3-204ENST00000585740 B4GALT5O43286 388 aa12□□□□□ -0.49
LIG3-204ENST00000585740 MED7O43513 233 aa12□□□□□ -0.49
LIG3-204ENST00000585740 ERLIN2O94905 339 aa12□□□□□ -0.49
LIG3-204ENST00000585740 CST3P01034 146 aaPredicted RBP12□□□□□ -0.49
LIG3-204ENST00000585740 GJB1P08034 283 aa12□□□□□ -0.49
LIG3-204ENST00000585740 GLI1P08151 1106 aa12□□□□□ -0.49
LIG3-204ENST00000585740 STAG3L1P0CL83 205 aa12□□□□□ -0.49
LIG3-204ENST00000585740 GBP1P32455 592 aa12□□□□□ -0.49
LIG3-204ENST00000585740 MAN1A1P33908 653 aa12□□□□□ -0.49
LIG3-204ENST00000585740 PEX5P50542 639 aa12□□□□□ -0.49
LIG3-204ENST00000585740 TAP1Q03518 808 aa12□□□□□ -0.49
LIG3-204ENST00000585740 PTPROQ16827 1216 aa12□□□□□ -0.49
LIG3-204ENST00000585740 ZNF667Q5HYK9 610 aa12□□□□□ -0.49
LIG3-204ENST00000585740 DCAF12L1Q5VU92 463 aa12□□□□□ -0.49
LIG3-204ENST00000585740 MON1BQ7L1V2 547 aa12□□□□□ -0.49
LIG3-204ENST00000585740 MREGQ8N565 214 aa12□□□□□ -0.49
LIG3-204ENST00000585740 TMEM35BQ8NCS4 154 aa12□□□□□ -0.49
LIG3-204ENST00000585740 ZNF606Q8WXB4 792 aa12□□□□□ -0.49
LIG3-204ENST00000585740 CYFIP2Q96F07 1278 aa12□□□□□ -0.49
LIG3-204ENST00000585740 SCLT1Q96NL6 688 aa12□□□□□ -0.49
LIG3-204ENST00000585740 AP1M1Q9BXS5 423 aa12□□□□□ -0.49
LIG3-204ENST00000585740 GCOM2Q9BZD3 368 aaPredicted RBP12□□□□□ -0.49
LIG3-204ENST00000585740 MINDY3Q9H8M7 445 aa12□□□□□ -0.49
LIG3-204ENST00000585740 VRTNQ9H8Y1 702 aa12□□□□□ -0.49
LIG3-204ENST00000585740 CYP3A43Q9HB55 503 aa12□□□□□ -0.49
LIG3-204ENST00000585740 CISHQ9NSE2 258 aa12□□□□□ -0.49
LIG3-204ENST00000585740 ADAM22Q9P0K1 906 aa12□□□□□ -0.49
LIG3-204ENST00000585740 ANAPC7Q9UJX3 599 aa12□□□□□ -0.49
LIG3-204ENST00000585740 PCDHGC3Q9UN70 934 aa12□□□□□ -0.49
LIG3-204ENST00000585740 UTP11Q9Y3A2 253 aaKnown RBP12□□□□□ -0.49
LIG3-204ENST00000585740 Q9Y3F1 56 aa12□□□□□ -0.49
LIG3-204ENST00000585740 SMIM35A0A1B0GVV1 85 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 A6NJR5 290 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 LACTBL1A8MY62 500 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 ATMINO43313 823 aaPredicted RBP11.99□□□□□ -0.49
LIG3-204ENST00000585740 OPA1O60313 960 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 HSF2BPO75031 334 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 PHF2O75151 1096 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 STAU1O95793 577 aaKnown RBP11.99□□□□□ -0.49
LIG3-204ENST00000585740 PAEPP09466 180 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 CXCL8P10145 99 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 MYBL2P10244 700 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 CHRNA3P32297 505 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 CDH5P33151 784 aaPredicted RBP11.99□□□□□ -0.49
LIG3-204ENST00000585740 RGS2P41220 211 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 PTP4A2Q12974 167 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 TAF1CQ15572 869 aaPredicted RBP11.99□□□□□ -0.49
LIG3-204ENST00000585740 OLFML2BQ68BL8 750 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 FBXO46Q6PJ61 603 aaPredicted RBP11.99□□□□□ -0.49
LIG3-204ENST00000585740 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.99□□□□□ -0.49
LIG3-204ENST00000585740 CASKIN2Q8WXE0 1202 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 SOCS4Q8WXH5 440 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 CPA5Q8WXQ8 436 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 IFT81Q8WYA0 676 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 ALG3Q92685 438 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 FAM84AQ96KN4 292 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 RUFY1Q96T51 708 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 PARVAQ9NVD7 372 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 CPA4Q9UI42 421 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 DERAQ9Y315 318 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 C2CD2Q9Y426 696 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 UMODL1Q5DID0 1318 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 NRCAMQ92823 1304 aa11.99□□□□□ -0.49
LIG3-204ENST00000585740 MROH7Q68CQ1 1323 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 GOLGA6BA6NDN3 693 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 DYNC1LI2O43237 492 aaPredicted RBP11.98□□□□□ -0.49
LIG3-204ENST00000585740 PSTPIP1O43586 416 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 TSPAN1O60635 241 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms