RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CACNA2D4Q7Z3S7 1137 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 BSNDQ8WZ55 320 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 TNFRSF25Q93038 417 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SUSD3Q96L08 255 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 GJB4Q9NTQ9 266 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PDRG1Q9NUG6 133 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ORC3Q9UBD5 711 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PCDHGA5Q9Y5G8 931 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CITO14578 2027 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 A0A087WWV3 80 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 FAM205CA6NFA0 338 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SLC38A8A6NNN8 435 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 DPYSL4O14531 572 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 TM4SF5O14894 197 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PFKFB2O60825 505 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 EPN2O95208 641 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 EDN1P05305 212 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 KCNE1P15382 129 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 RPA1P27694 616 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 MARCKSP29966 332 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CTHP32929 405 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PLCB2Q00722 1185 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SOX4Q06945 474 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SRSF5Q13243 272 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PTPAQ15257 358 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 TEAD2Q15562 447 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 NT5DC1Q5TFE4 455 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 HS6ST3Q8IZP7 471 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 GAB3Q8WWW8 586 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ARRDC1-AS1Q9H2J1 176 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 RBM12Q9NTZ6 932 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 OBP2AQ9NY56 170 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 TPCN1Q9ULQ1 816 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 USP20Q9Y2K6 914 aa13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SETXQ7Z333 2677 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 GCN1Q92616 2671 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-216ENST00000579853 LAMA5O15230 3695 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 NRG2O14511 850 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ATG13O75143 517 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 MED24O75448 989 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 AKAP3O75969 853 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PROS1P07225 676 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 MCM4P33991 863 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 RAP1GAPP47736 663 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 EPHB3P54753 998 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CCINQ13939 588 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ZNF568Q3ZCX4 644 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 STPG1Q5TH74 334 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 HAUS3Q68CZ6 603 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 Q6ZS52 159 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SHKBP1Q8TBC3 707 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ACAP3Q96P50 834 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ACO2Q99798 780 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 MRPL4Q9BYD3 311 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CNTN3Q9P232 1028 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ASB3Q9Y575 518 aa13.35□□□□□ -0.27
CDK5RAP3-216ENST00000579853 FREM2Q5SZK8 3169 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 A0A1W2PRU2 124 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 HAX1O00165 279 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 AXIN1O15169 862 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 RPP40O75818 363 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 KCNK5O95279 499 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 MCF2P10911 925 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 GJA1P17302 382 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ALDH1A3P47895 512 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ORC2Q13416 577 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SF3A2Q15428 464 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 RNF19BQ6ZMZ0 732 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SKAP1Q86WV1 359 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ARID3BQ8IVW6 561 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CEP120Q8N960 986 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 BEST2Q8NFU1 509 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 DDX12PQ92771 950 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 TBC1D32Q96NH3 1257 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 TCHPQ9BT92 498 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 LSM14BQ9BX40 385 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CDT1Q9H211 546 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 TMEM134Q9H6X4 195 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 VPS45Q9NRW7 570 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 RBM19Q9Y4C8 960 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 YIPF1Q9Y548 306 aa13.34□□□□□ -0.27
CDK5RAP3-216ENST00000579853 FLNBO75369 2602 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 OAZ2O95190 189 aa13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 CCDC192P0DO97 292 aa13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 WEE1P30291 646 aa13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 SOX9P48436 509 aa13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 OSTNP61366 133 aa13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 YWHAHQ04917 246 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 TRIM29Q14134 588 aa13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 PON2Q15165 354 aa13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 ANKRD1Q15327 319 aa13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 ARHGAP15Q53QZ3 475 aa13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 PLA2G2CQ5R387 149 aa13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 TXNDC11Q6PKC3 985 aa13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 DIS3L2Q8IYB7 885 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 ZC3H10Q96K80 434 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-216ENST00000579853 ZMAT2Q96NC0 199 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms