RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 RBBP8NLQ8NC74 664 aaPredicted RBP13□□□□□ -0.33
PCDHGA9-201ENST00000573521 IFT43Q96FT9 208 aa13□□□□□ -0.33
PCDHGA9-201ENST00000573521 NLRP4Q96MN2 994 aa13□□□□□ -0.33
PCDHGA9-201ENST00000573521 PNKPQ96T60 521 aa13□□□□□ -0.33
PCDHGA9-201ENST00000573521 NIF3L1Q9GZT8 377 aa13□□□□□ -0.33
PCDHGA9-201ENST00000573521 COX16Q9P0S2 106 aa13□□□□□ -0.33
PCDHGA9-201ENST00000573521 STX18Q9P2W9 335 aaKnown RBP13□□□□□ -0.33
PCDHGA9-201ENST00000573521 NWD1Q149M9 1564 aa13□□□□□ -0.33
PCDHGA9-201ENST00000573521 CPS1P31327 1500 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 GLRA3O75311 464 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 NEK2P51955 445 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 PDK2Q15119 407 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 SCARA5Q6ZMJ2 495 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 FRA10AC1Q70Z53 315 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 EXD1Q8NHP7 514 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 CEP70Q8NHQ1 597 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 SCFD2Q8WU76 684 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 E2F7Q96AV8 911 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 MXRA8Q9BRK3 442 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 EHD4Q9H223 541 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 PLEKHA5Q9HAU0 1116 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 A8MXQ7 604 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 POLBP06746 335 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 TSHRP16473 764 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 CALB2P22676 271 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 DNAJB2P25686 324 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 WLSQ5T9L3 541 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 RNF169Q8NCN4 708 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 CHCHD3Q9NX63 227 aaKnown RBP12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 ADA2Q9NZK5 511 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 TTC7AQ9ULT0 858 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 PHF20L1A8MW92 1017 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 PTK7Q13308 1070 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 SLC29A2Q14542 456 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 NTRK3Q16288 839 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 COBLL1Q53SF7 1204 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 NLRP9Q7RTR0 991 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 TRIM51Q9BSJ1 452 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 DCDC2Q9UHG0 476 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 DAGLAQ9Y4D2 1042 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 ACTL7BQ9Y614 415 aa12.99□□□□□ -0.33
PCDHGA9-201ENST00000573521 RPLP2P05387 115 aaKnown RBP12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 KCNA3P22001 575 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 NMT1P30419 496 aaKnown RBP12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 CASP2P42575 452 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 LRRC14Q15048 493 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 TRMT5Q32P41 509 aaKnown RBP12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 IER5Q5VY09 327 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 C1orf131Q8NDD1 294 aaKnown RBP12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 CASKIN2Q8WXE0 1202 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 SMYD3Q9H7B4 428 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 RXFP1Q9HBX9 757 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 WARS2Q9UGM6 360 aaKnown RBP12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 SHOC2Q9UQ13 582 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 ANGPT2O15123 496 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 HMGB3O15347 200 aaKnown RBP12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 CAMTA2O94983 1202 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 FSBPO95073 299 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 PDHA1P08559 390 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 ITGA8P53708 1063 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 PRAMEP78395 509 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 NCOA4Q13772 614 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 SEC23AQ15436 765 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 CDO1Q16878 200 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 Q4G0T1 1027 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 EFHC1Q5JVL4 640 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 SNRNP48Q6IEG0 339 aaKnown RBP12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 SWSAP1Q6NVH7 229 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 TRIM65Q6PJ69 517 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 MS4A14Q96JA4 679 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 C10orf88Q9H8K7 445 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 PRMT7Q9NVM4 692 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 PCYT1AP49585 367 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 SLC44A5Q8NCS7 719 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 DTX3LQ8TDB6 740 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 AP4S1Q9Y587 144 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 ADGRA3Q8IWK6 1321 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 PNPLA4P41247 253 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 NAB1Q13506 487 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 FBXW10Q5XX13 1052 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 XPO7Q9UIA9 1087 aaKnown RBP12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 SUFUQ9UMX1 484 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 SORCS3Q9UPU3 1222 aa12.98□□□□□ -0.33
PCDHGA9-201ENST00000573521 TMEM131LA2VDJ0 1609 aa12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 ECE2O60344 883 aa12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 SCTRP47872 440 aa12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 LRRC6Q86X45 466 aa12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 RAPGEF5Q92565 580 aa12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 ULK4Q96C45 1275 aa12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 DHX35Q9H5Z1 703 aaKnown RBP12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 SAR1AQ9NR31 198 aa12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 AGPAT3Q9NRZ7 376 aa12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 PRKCBP05771 671 aa12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 THRAP10827 490 aa12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 SLC9A1P19634 815 aa12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 NFX1Q12986 1120 aaKnown RBP12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 CCDC92Q53HC0 331 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA9-201ENST00000573521 NAPEPLDQ6IQ20 393 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms