RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 NCAPHQ15003 741 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 CRY1Q16526 586 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 SLC41A1Q8IVJ1 513 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 DEFB119Q8N690 84 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 LEMD2Q8NC56 503 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 ENGASEQ8NFI3 743 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 P2RY13Q9BPV8 354 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 BOLA2Q9H3K6 86 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 PKD2L1Q9P0L9 805 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 MMP17Q9ULZ9 603 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 MYOFQ9NZM1 2061 aa12.01□□□□□ -0.49
HDGFL3-204ENST00000563790 OTOL1A6NHN0 477 aaPredicted RBP12□□□□□ -0.49
HDGFL3-204ENST00000563790 MAGEB2O15479 319 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 DHX16O60231 1041 aaKnown RBP12□□□□□ -0.49
HDGFL3-204ENST00000563790 PPFIA2O75334 1257 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 ATG7O95352 703 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 SFPQP23246 707 aaKnown RBP eCLIP12□□□□□ -0.49
HDGFL3-204ENST00000563790 TMOD1P28289 359 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 MATKP42679 507 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 CTDSPL2Q05D32 466 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 HES3Q5TGS1 186 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 SLC36A4Q6YBV0 504 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 TTC30AQ86WT1 665 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 HS6ST3Q8IZP7 471 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 CCDC26Q8TAB7 109 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 SSC4DQ8WTU2 575 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 TBC1D32Q96NH3 1257 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 SCLT1Q96NL6 688 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 NAPBQ9H115 298 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 VAT1LQ9HCJ6 419 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 MRS2Q9HD23 443 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 TPCN1Q9ULQ1 816 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 NOB1Q9ULX3 412 aaKnown RBP12□□□□□ -0.49
HDGFL3-204ENST00000563790 OBSL1O75147 1896 aa12□□□□□ -0.49
HDGFL3-204ENST00000563790 ARL5CA6NH57 179 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 DPYSL4O14531 572 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 TADA2AO75478 443 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 RECQL4O94761 1208 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 AGFG2O95081 481 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 FGRP09769 529 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 HNRNPLP14866 589 aaKnown RBP eCLIP11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 GNSP15586 552 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 PSMD2Q13200 908 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 MTMR1Q13613 665 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 RUNX3Q13761 415 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 SUZ12Q15022 739 aaKnown RBP11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 ASPRV1Q53RT3 343 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 FAM171A1Q5VUB5 890 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 EFCAB12Q6NXP0 572 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 FBXL19Q6PCT2 694 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 CEP57Q86XR8 500 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 CACTIN-AS1Q8N1I8 211 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 SHKBP1Q8TBC3 707 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 BPIFB1Q8TDL5 484 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 USP33Q8TEY7 942 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 APPBP2Q92624 585 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 EXOC4Q96A65 974 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 MTMR8Q96EF0 704 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 FAM83CQ9BQN1 747 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 ARHGAP9Q9BRR9 750 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 UBN1Q9NPG3 1134 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 HPS4Q9NQG7 708 aa11.99□□□□□ -0.49
HDGFL3-204ENST00000563790 NOTCH1P46531 2555 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 A1L4Q6 167 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 PALM3A6NDB9 673 aaPredicted RBP11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 MAFGO15525 162 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 C1SP09871 688 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 FAM87AP0C7U9 286 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 MYL4P12829 197 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 SREBF1P36956 1147 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 GRK6P43250 576 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 SKIDA1Q1XH10 827 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 EML3Q32P44 896 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 ARL13BQ3SXY8 428 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 IQCEQ6IPM2 695 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 TMEM92Q6UXU6 159 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 CCDC81Q6ZN84 652 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 ERC1Q8IUD2 1116 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 GPIHBP1Q8IV16 184 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 MIER1Q8N108 512 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 PI4K2BQ8TCG2 481 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 NLRP7Q8WX94 980 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 HSPA12BQ96MM6 686 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 GCOM2Q9BZD3 368 aaPredicted RBP11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 MIOSQ9NXC5 875 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 MTRRQ9UBK8 725 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 TBX20Q9UMR3 447 aa11.98□□□□□ -0.49
HDGFL3-204ENST00000563790 TRIM66O15016 1216 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 ZBTB5O15062 677 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 DXOO77932 396 aaKnown RBP11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 ATP5JP18859 108 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 ATP4AP20648 1035 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 U2AF2P26368 475 aaKnown RBP eCLIP11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 CASRP41180 1078 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 MCM2P49736 904 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 SCNN1GP51170 649 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 ERVPABLB-1P60509 514 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 NAIF1Q69YI7 327 aaPredicted RBP11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 IL27RAQ6UWB1 636 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms