RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 MAPK8P45983 427 aa9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 EXOSC10Q01780 885 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 PCBP1Q15365 356 aaKnown RBP eCLIP9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 INF2Q27J81 1249 aa9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 ADCK5Q3MIX3 580 aa9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 CD300LGQ6UXG3 332 aa9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 DHX32Q7L7V1 743 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 RALGPS2Q86X27 583 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 ARID3BQ8IVW6 561 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 C4orf19Q8IY42 314 aa9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 LRRC3BQ96PB8 259 aa9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 MKNK1Q9BUB5 465 aa9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 POLR3FQ9H1D9 316 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 PDZD7Q9H5P4 517 aa9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 NEUROG3Q9Y4Z2 214 aa9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 ZMYM2Q9UBW7 1377 aa9.87□□□□□ -0.83
SNRPA1-208ENST00000559686 CYP3A7-CYP3A51PA0A087WV96 503 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 CCDC196A0A1B0GTZ2 297 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 BCLAF3A2AJT9 711 aaKnown RBP9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 KHNYNO15037 678 aaKnown RBP9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 TRAPPC3O43617 180 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 RHOBTB1O94844 696 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 MICAL2O94851 1124 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 PDIA4P13667 645 aaKnown RBP9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 ATF2P15336 505 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 CYP3A7P24462 503 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 ARL2P36404 184 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 FOXK1P85037 733 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 PPP2R5CQ13362 524 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 EPHA7Q15375 998 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 SLC8B1Q6J4K2 584 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 C1orf228Q6PIY5 440 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 HAUS6Q7Z4H7 955 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 TCEAL8Q8IYN2 117 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 NUP205Q92621 2012 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 ZC3H10Q96K80 434 aaKnown RBP9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 TRPV4Q9HBA0 871 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 GPRC5CQ9NQ84 441 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 PPME1Q9Y570 386 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 TRIP11Q15643 1979 aa9.86□□□□□ -0.83
SNRPA1-208ENST00000559686 CDX4O14627 284 aaPredicted RBP9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 N4BP3O15049 544 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 USO1O60763 962 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 RNF40O75150 1001 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 AKAP3O75969 853 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 EGFP01133 1207 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 CPB1P15086 417 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 CSRP1P21291 193 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 MLLT6P55198 1093 aaPredicted RBP9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 CCT2P78371 535 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 IRX4P78413 519 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 SIM1P81133 766 aaPredicted RBP9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 DSG2Q14126 1118 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 UPP1Q16831 310 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 CTXN3Q4LDR2 81 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 ARHGAP29Q52LW3 1261 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 RNF20Q5VTR2 975 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 EEF1DP3Q658K8 133 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 FSTL4Q6MZW2 842 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 RNF19BQ6ZMZ0 732 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 Q6ZUG5 572 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 SYNPOQ8N3V7 929 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 CHCHD4Q8N4Q1 142 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 HNRNPLLQ8WVV9 542 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 BRF1Q92994 677 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 E2F7Q96AV8 911 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 PGLYRP2Q96PD5 576 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 BBC3Q96PG8 261 aaPredicted RBP9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 TMEM209Q96SK2 561 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 ADPGKQ9BRR6 497 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 ESYT1Q9BSJ8 1104 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 SMG9Q9H0W8 520 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 ZSWIM4Q9H7M6 989 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 NCOA5Q9HCD5 579 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 FBXL5Q9UKA1 691 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 PCDHA4Q9UN74 947 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 MSRB2Q9Y3D2 182 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 GPSM3Q9Y4H4 160 aa9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 NUP210Q8TEM1 1887 aaPredicted RBP9.85□□□□□ -0.83
SNRPA1-208ENST00000559686 TMEM189-UBE2V1I3L0A0 370 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 EDN1P05305 212 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 CDR1P51861 262 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 DGKEP52429 567 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 OSTNP61366 133 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 SOX4Q06945 474 aaPredicted RBP9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 FCHO2Q0JRZ9 810 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 PSMD2Q13200 908 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 PRPF4BQ13523 1007 aaKnown RBP9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 GPR158Q5T848 1215 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 NAIF1Q69YI7 327 aaPredicted RBP9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 PPP4R3AQ6IN85 833 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 CYP2U1Q7Z449 544 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 TTC30AQ86WT1 665 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 PROSER1Q86XN7 944 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 ZBTB8OSQ8IWT0 167 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 BLIDQ8IZY5 108 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 PIGOQ8TEQ8 1089 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 PIGKQ92643 395 aa9.84□□□□□ -0.83
SNRPA1-208ENST00000559686 PPP1R10Q96QC0 940 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms