RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 MROH9Q5TGP6 573 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 KRT40Q6A162 431 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 LCNL1Q6ZST4 164 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 C16orf86Q6ZW13 317 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 DEFB128Q7Z7B8 93 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 DCP2Q8IU60 420 aaKnown RBP7.03□□□□□ -1.28
CRNDE-207ENST00000559598 IGDCC3Q8IVU1 814 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 SCUBE1Q8IWY4 988 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 GDPD5Q8WTR4 605 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 SIGLEC10Q96LC7 697 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 CDC6Q99741 560 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 ATP8A2Q9NTI2 1148 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 CTNNA3Q9UI47 895 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 SYNPO2Q9UMS6 1093 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 IRAK3Q9Y616 596 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 LCTP09848 1927 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 FAM186AA6NE01 2351 aa7.03□□□□□ -1.28
CRNDE-207ENST00000559598 ASTN1O14525 1302 aa7.02□□□□□ -1.28
CRNDE-207ENST00000559598 GRIN2DO15399 1336 aa7.02□□□□□ -1.28
CRNDE-207ENST00000559598 RAD50Q92878 1312 aa7.02□□□□□ -1.28
CRNDE-207ENST00000559598 BLACEA4D250 179 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 H7BY64 318 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 EFCAB14O75071 495 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 FAM153BP0C7A2 387 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 KCNA5P22460 613 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 CPT1AP50416 773 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 BRDTQ58F21 947 aaPredicted RBP7.02□□□□□ -1.29
CRNDE-207ENST00000559598 FOXB2Q5VYV0 432 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 IQSEC1Q6DN90 963 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 FAM133AQ8N9E0 248 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.02□□□□□ -1.29
CRNDE-207ENST00000559598 SSH3Q8TE77 659 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 TGS1Q96RS0 853 aaKnown RBP7.02□□□□□ -1.29
CRNDE-207ENST00000559598 IRF2BPLQ9H1B7 796 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 ACAD9Q9H845 621 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 SLC38A10Q9HBR0 1119 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 VTA1Q9NP79 307 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 CLDND1Q9NY35 253 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 CNOT6Q9ULM6 557 aaKnown RBP7.02□□□□□ -1.29
CRNDE-207ENST00000559598 COA3Q9Y2R0 106 aaPredicted RBP7.02□□□□□ -1.29
CRNDE-207ENST00000559598 SIT1Q9Y3P8 196 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 RIPK3Q9Y572 518 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 KMT2EQ8IZD2 1858 aa7.02□□□□□ -1.29
CRNDE-207ENST00000559598 TRIOO75962 3097 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 RIF1Q5UIP0 2472 aaKnown RBP7.01□□□□□ -1.29
CRNDE-207ENST00000559598 COL4A6Q14031 1691 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 TRBV23-1A0A0A0MS06 115 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 LOC102724159A0A0B4J2E5 919 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.01□□□□□ -1.29
CRNDE-207ENST00000559598 IPO8O15397 1037 aaKnown RBP7.01□□□□□ -1.29
CRNDE-207ENST00000559598 BUB1BO60566 1050 aaPredicted RBP7.01□□□□□ -1.29
CRNDE-207ENST00000559598 IQCF3P0C7M6 154 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 IL9P15248 144 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 PDE6AP16499 860 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 SLC6A11P48066 632 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 ERVK-21P61565 698 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 SSPNQ14714 243 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 PWP2Q15269 919 aaKnown RBP7.01□□□□□ -1.29
CRNDE-207ENST00000559598 TARBP2Q15633 366 aaKnown RBP7.01□□□□□ -1.29
CRNDE-207ENST00000559598 PTPROQ16827 1216 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 TKFCQ3LXA3 575 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 FAM209AQ5JX71 171 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 SLC9C2Q5TAH2 1124 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 NFRKBQ6P4R8 1299 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 KCNT2Q6UVM3 1135 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 DPH6Q7L8W6 267 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 ERC1Q8IUD2 1116 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 RPAP2Q8IXW5 612 aaPredicted RBP7.01□□□□□ -1.29
CRNDE-207ENST00000559598 FAM9BQ8IZU0 186 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 CAGE1Q8TC20 777 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 NEK9Q8TD19 979 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 SDR42E1Q8WUS8 393 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 SEC14L1Q92503 715 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 ALG3Q92685 438 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 ZFYVE21Q9BQ24 234 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 FTOQ9C0B1 505 aaKnown RBP eCLIP7.01□□□□□ -1.29
CRNDE-207ENST00000559598 RNF38Q9H0F5 515 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 BCAS3Q9H6U6 928 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 TRMT13Q9NUP7 481 aaKnown RBP7.01□□□□□ -1.29
CRNDE-207ENST00000559598 FEM1BQ9UK73 627 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 KCTD3Q9Y597 815 aa7.01□□□□□ -1.29
CRNDE-207ENST00000559598 MYO7AQ13402 2215 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 ATG2AQ2TAZ0 1938 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 F5H6K3 240 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 NCK2O43639 380 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 KPNA6O60684 536 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 SURF6O75683 361 aaKnown RBP7□□□□□ -1.29
CRNDE-207ENST00000559598 GJB5O95377 273 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 NDUFB10O96000 172 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 CYP2C9P11712 490 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 NCAM1P13591 858 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 PFKLP17858 780 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 PI3P19957 117 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 WDR5P61964 334 aaKnown RBP7□□□□□ -1.29
CRNDE-207ENST00000559598 PSMC6P62333 389 aa7□□□□□ -1.29
CRNDE-207ENST00000559598 SUMO1P63165 101 aaKnown RBP7□□□□□ -1.29
CRNDE-207ENST00000559598 PURAQ00577 322 aaKnown RBP7□□□□□ -1.29
CRNDE-207ENST00000559598 KLRC3Q07444 240 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms