RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 CCDC6Q16204 474 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 SLC18A3Q16572 532 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 CNPY1Q3B7I2 92 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 PLEKHG6Q3KR16 790 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 ZNF598Q86UK7 904 aaKnown RBP10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 COL23A1Q86Y22 540 aaPredicted RBP10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 ECHDC2Q86YB7 292 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 NATD1Q8N6N6 113 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 SEC14L1Q92503 715 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 LENG1Q96BZ8 264 aaPredicted RBP10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 SETDB2Q96T68 719 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 CIB1Q99828 191 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 DDX50Q9BQ39 737 aaKnown RBP10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 PRKAG3Q9UGI9 489 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 POLG2Q9UHN1 485 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 TDRKHQ9Y2W6 561 aaKnown RBP10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 TRIM17Q9Y577 477 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 SLC4A7Q9Y6M7 1214 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 KANSL1LA0AUZ9 987 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 A8MX80 341 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 GOLGA8MH3BSY2 632 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 TSPAN9O75954 239 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 TJP3O95049 919 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 ASLP04424 464 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 CREB1P16220 341 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 EPHB2P29323 1055 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 LONP1P36776 959 aaKnown RBP10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 KCNMA1Q12791 1236 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 CEP78Q5JTW2 689 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 METTL11BQ5VVY1 283 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 SNX30Q5VWJ9 437 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 PPP4R4Q6NUP7 873 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 DTX3Q8N9I9 347 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 CDC26Q8NHZ8 85 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 LRRC8CQ8TDW0 803 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 TNFRSF25Q93038 417 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 FOXP3Q9BZS1 431 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 SEMA6BQ9H3T3 888 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 DENND2DQ9H6A0 471 aaPredicted RBP10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 PLEKHA5Q9HAU0 1116 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 C12orf4Q9NQ89 552 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 ATP8A2Q9NTI2 1148 aa10.93□□□□□ -0.66
EFCAB11-208ENST00000555872 TMEM120BA0PK00 339 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 SFI1A8K8P3 1242 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 ETS2P15036 469 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 UBA7P41226 1012 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 ADARP55265 1226 aaKnown RBP10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 NPY5RQ15761 445 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 MAN2A1Q16706 1144 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 CTC1Q2NKJ3 1217 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 FAM196AQ6ZSG2 479 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 INTS8Q75QN2 995 aaKnown RBP10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 ADAT2Q7Z6V5 191 aaKnown RBP10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 TREML1Q86YW5 311 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 AGGF1Q8N302 714 aaeCLIP10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 RSAD2Q8WXG1 361 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 TIPINQ9BVW5 301 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 TBC1D10AQ9BXI6 508 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 MYLK2Q9H1R3 596 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 LRMDAQ9H2I8 198 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 METTL5Q9NRN9 209 aaKnown RBP10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 INTUQ9ULD6 942 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 NR2E1Q9Y466 385 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 SPEF2Q9C093 1822 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 NID2Q14112 1375 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 hCG_1984214I3L0E3 225 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 RASGRF2O14827 1237 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 PLEKHA8P1O95397 391 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 UBTFL6P0CB48 400 aaPredicted RBP10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 ZCCHC18P0CG32 403 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 PSMA3P25788 255 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 HNF1BP35680 557 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 VHLP40337 213 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 MCAMP43121 646 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 ASIC1P78348 528 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 CCDC14Q49A88 953 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 CLVS1Q8IUQ0 354 aaPredicted RBP10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 IFNL3Q8IZI9 196 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 CADM3Q8N126 398 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 ZBTB38Q8NAP3 1195 aaPredicted RBP10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 FBXO25Q8TCJ0 367 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 ARHGEF2Q92974 986 aaKnown RBP10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 HAUS1Q96CS2 278 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 HEPHQ9BQS7 1158 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 HERC2P3Q9BVR0 1158 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 CALN1Q9BXU9 219 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 FAM192AQ9GZU8 254 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 SCPEP1Q9HB40 452 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 KCNK9Q9NPC2 374 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 CASS4Q9NQ75 786 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 KBTBD4Q9NVX7 518 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 STOML1Q9UBI4 398 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 SNX24Q9Y343 169 aa10.92□□□□□ -0.66
EFCAB11-208ENST00000555872 CCDC162PA2VCL2 907 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 ANKRD34BA5PLL1 514 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 SIGLEC16A6NMB1 481 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 ADAMTS3O15072 1205 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 FGFR4P22455 802 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 SERPINB6P35237 376 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 TMED10P49755 219 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms