RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 KCNH7Q9NS40 1196 aa12.69□□□□□ -0.38
ABCD4-222ENST00000555617 MTRRQ9UBK8 725 aa12.69□□□□□ -0.38
ABCD4-222ENST00000555617 MYO18AQ92614 2054 aaKnown RBP12.69□□□□□ -0.38
ABCD4-222ENST00000555617 ANK1P16157 1881 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 A0A1W2PRU2 124 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 ESYT2A0FGR8 921 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 DDX39AO00148 427 aaKnown RBP12.68□□□□□ -0.38
ABCD4-222ENST00000555617 KLK10O43240 276 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 TNFSF14O43557 240 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 TADA2AO75478 443 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 PARP1P09874 1014 aaKnown RBP12.68□□□□□ -0.38
ABCD4-222ENST00000555617 DRD1P21728 446 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 MAOBP27338 520 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 SPIRE1Q08AE8 756 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 SCRN1Q12765 414 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 CRY1Q16526 586 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 CYP4A22Q5TCH4 519 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 SWSAP1Q6NVH7 229 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 RTL10Q7L3V2 364 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 TMEM57Q8N5G2 664 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 RIN3Q8TB24 985 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 FAM83CQ9BQN1 747 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 LRRC3Q9BY71 257 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 GAREM1Q9H706 876 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 ZNF302Q9NR11 478 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 GKN1Q9NS71 199 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 INSL5Q9Y5Q6 135 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 ZFC3H1O60293 1989 aaKnown RBP12.68□□□□□ -0.38
ABCD4-222ENST00000555617 NBEAL1Q6ZS30 2694 aa12.68□□□□□ -0.38
ABCD4-222ENST00000555617 LRRK1Q38SD2 2015 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 NFASCO94856 1347 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 A0A1W2PQD8 194 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 CBX4O00257 560 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 FAM87AP0C7U9 286 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 HOXB4P17483 251 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-222ENST00000555617 HOXA11P31270 313 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-222ENST00000555617 SEC13P55735 322 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 ROR1Q01973 937 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 SKIDA1Q1XH10 827 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 FBXO43Q4G163 708 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 HES3Q5TGS1 186 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 CEP85Q6P2H3 762 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 HAUS6Q7Z4H7 955 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 HSPA12BQ96MM6 686 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 P2RY13Q9BPV8 354 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 EIF2AQ9BY44 585 aaKnown RBP12.67□□□□□ -0.38
ABCD4-222ENST00000555617 GCOM2Q9BZD3 368 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-222ENST00000555617 LY9Q9HBG7 655 aa12.67□□□□□ -0.38
ABCD4-222ENST00000555617 FLRT2O43155 660 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 CYTH3O43739 400 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 PRKCBP05771 671 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 ZNF883P0CG24 379 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 SFPQP23246 707 aaKnown RBP eCLIP12.66□□□□□ -0.38
ABCD4-222ENST00000555617 PCBP4P57723 403 aaKnown RBP12.66□□□□□ -0.38
ABCD4-222ENST00000555617 RUNX3Q13761 415 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 HSP90AA2PQ14568 343 aaPredicted RBP12.66□□□□□ -0.38
ABCD4-222ENST00000555617 CATSPER4Q7RTX7 472 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 RABEPKQ7Z6M1 372 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 SFTPA1Q8IWL2 248 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 CKAP2LQ8IYA6 745 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 BPIFB1Q8TDL5 484 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 OXER1Q8TDS5 423 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 ARHGAP45Q92619 1136 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 MMP17Q9ULZ9 603 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 TBX20Q9UMR3 447 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 IPPQ9Y573 584 aa12.66□□□□□ -0.38
ABCD4-222ENST00000555617 PRRG1O14668 218 aa12.65□□□□□ -0.38
ABCD4-222ENST00000555617 MAGEB2O15479 319 aa12.65□□□□□ -0.38
ABCD4-222ENST00000555617 AP5Z1O43299 807 aa12.65□□□□□ -0.38
ABCD4-222ENST00000555617 ITGA4P13612 1032 aa12.65□□□□□ -0.38
ABCD4-222ENST00000555617 FAM160B1Q5W0V3 765 aa12.65□□□□□ -0.38
ABCD4-222ENST00000555617 TBC1D10CQ8IV04 446 aa12.65□□□□□ -0.38
ABCD4-222ENST00000555617 TRIML1Q8N9V2 468 aa12.65□□□□□ -0.38
ABCD4-222ENST00000555617 CD93Q9NPY3 652 aa12.65□□□□□ -0.38
ABCD4-222ENST00000555617 TP53BP1Q12888 1972 aaPredicted RBP12.65□□□□□ -0.38
ABCD4-222ENST00000555617 ZNF638Q14966 1978 aaKnown RBP12.65□□□□□ -0.38
ABCD4-222ENST00000555617 NEDD4P46934 1319 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 CCDC168Q8NDH2 2452 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 PCSK5Q92824 1860 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
ABCD4-222ENST00000555617 WIPF3A6NGB9 483 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 CASTOR2A6NHX0 329 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 KLRF2D3W0D1 207 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 ABLIM3O94929 683 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 GJA4P35212 333 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 HNF1BP35680 557 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 C1QL3Q5VWW1 255 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 DHX40Q8IX18 779 aaKnown RBP12.64□□□□□ -0.39
ABCD4-222ENST00000555617 HMGB4Q8WW32 186 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 KCNE4Q8WWG9 221 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
ABCD4-222ENST00000555617 SDF4Q9BRK5 362 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 CXCL16Q9H2A7 254 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 MINDY3Q9H8M7 445 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 CYP4F11Q9HBI6 524 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 ZDHHC4Q9NPG8 344 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 MAD2L2Q9UI95 211 aa12.64□□□□□ -0.39
ABCD4-222ENST00000555617 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms