RNA–Protein interactions for RNA: ENST00000554124.2

STRN3-204, Transcript of striatin 3, humanhuman

TSL 4

Gene STRN3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-204ENST00000554124 ZNF529Q6P280 563 aa4.85□□□□□ -1.63
STRN3-204ENST00000554124 AMOTL1Q8IY63 956 aa4.85□□□□□ -1.63
STRN3-204ENST00000554124 CYFIP2Q96F07 1278 aa4.85□□□□□ -1.63
STRN3-204ENST00000554124 NUP88Q99567 741 aaPredicted RBP4.85□□□□□ -1.63
STRN3-204ENST00000554124 CCDC8Q9H0W5 538 aaPredicted RBP4.85□□□□□ -1.63
STRN3-204ENST00000554124 VTA1Q9NP79 307 aa4.85□□□□□ -1.63
STRN3-204ENST00000554124 SCOCQ9UIL1 159 aa4.85□□□□□ -1.63
STRN3-204ENST00000554124 AJAP1Q9UKB5 411 aaPredicted RBP4.85□□□□□ -1.63
STRN3-204ENST00000554124 MRFAP1Q9Y605 127 aa4.85□□□□□ -1.63
STRN3-204ENST00000554124 PNPLA7Q6ZV29 1317 aa4.85□□□□□ -1.63
STRN3-204ENST00000554124 ATRNL1Q5VV63 1379 aa4.85□□□□□ -1.63
STRN3-204ENST00000554124 ABCC2Q92887 1545 aa4.85□□□□□ -1.63
STRN3-204ENST00000554124 KAT6AQ92794 2004 aa4.85□□□□□ -1.63
STRN3-204ENST00000554124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.84□□□□□ -1.63
STRN3-204ENST00000554124 FAM171A2A8MVW0 826 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 TSPAN6O43657 245 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 ORC4O43929 436 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 GUCY1A2P33402 732 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 ALDH1A3P47895 512 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 RAB27AP51159 221 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 ATXN1P54253 815 aaKnown RBP4.84□□□□□ -1.63
STRN3-204ENST00000554124 SCAND1P57086 179 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 HSD11B2P80365 405 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 SCAPQ12770 1279 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 MALLQ13021 153 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 HLTFQ14527 1009 aaKnown RBP eCLIP4.84□□□□□ -1.63
STRN3-204ENST00000554124 ZNF169Q14929 603 aaPredicted RBP4.84□□□□□ -1.63
STRN3-204ENST00000554124 TOR2AQ5JU69 321 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 CXorf57Q6NSI4 855 aaKnown RBP4.84□□□□□ -1.63
STRN3-204ENST00000554124 ACTRT2Q8TDY3 377 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 STON2Q8WXE9 905 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 FUBP1Q96AE4 644 aaKnown RBP4.84□□□□□ -1.63
STRN3-204ENST00000554124 HOOK2Q96ED9 719 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 PTCD3Q96EY7 689 aaKnown RBP4.84□□□□□ -1.63
STRN3-204ENST00000554124 FAXDC2Q96IV6 333 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 SMAD5Q99717 465 aaKnown RBP4.84□□□□□ -1.63
STRN3-204ENST00000554124 PRDM13Q9H4Q3 707 aa4.84□□□□□ -1.63
STRN3-204ENST00000554124 PNMA8BQ9ULN7 279 aaPredicted RBP4.84□□□□□ -1.63
STRN3-204ENST00000554124 ABCA8O94911 1581 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 KDM5BQ9UGL1 1544 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 PLB1Q6P1J6 1458 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 MYADML2A6NDP7 307 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 PLEKHD1A6NEE1 506 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 KIF3BO15066 747 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 GPR32O75388 356 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 SNUPNO95149 360 aaKnown RBP4.83□□□□□ -1.64
STRN3-204ENST00000554124 MYBL2P10244 700 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 CKBP12277 381 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 IARSP41252 1262 aaKnown RBP4.83□□□□□ -1.64
STRN3-204ENST00000554124 GPR3P46089 330 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 PTH2RP49190 550 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 CREMQ03060 361 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 PTPN21Q16825 1174 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 ABCB5Q2M3G0 1257 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 COLEC12Q5KU26 742 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 SEM1Q6ZVN7 128 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 FMNL3Q8IVF7 1028 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 TCEAL8Q8IYN2 117 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 CHPFQ8IZ52 775 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 FITM2Q8N6M3 262 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 PNKPQ96T60 521 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 AIFM2Q9BRQ8 373 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 LRFN3Q9BTN0 628 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 LDAHQ9H6V9 325 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 MANSC1Q9H8J5 431 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 DMRT3Q9NQL9 472 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 ZNF277Q9NRM2 450 aaPredicted RBP4.83□□□□□ -1.64
STRN3-204ENST00000554124 AASDHPPTQ9NRN7 309 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 DNAJC28Q9NX36 388 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 MKS1Q9NXB0 559 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 ZIM2Q9NZV7 527 aa4.83□□□□□ -1.64
STRN3-204ENST00000554124 ARHGEF11O15085 1522 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 ARAP3Q8WWN8 1544 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 ARAP1Q96P48 1450 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 AATKQ6ZMQ8 1374 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 IGLV2-14P01704 120 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 GSPT1P15170 499 aaKnown RBP4.82□□□□□ -1.64
STRN3-204ENST00000554124 CCND1P24385 295 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 MCAMP43121 646 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 RARRES1P49788 294 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 CACNA2D1P54289 1103 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 SIM1P81133 766 aaPredicted RBP4.82□□□□□ -1.64
STRN3-204ENST00000554124 SRSF2Q01130 221 aaKnown RBP4.82□□□□□ -1.64
STRN3-204ENST00000554124 MGAT2Q10469 447 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 FAM102BQ5T8I3 360 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 LRCH2Q5VUJ6 765 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 NOL8Q76FK4 1167 aaKnown RBP4.82□□□□□ -1.64
STRN3-204ENST00000554124 UBE3BQ7Z3V4 1068 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 KCNK18Q7Z418 384 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 ARHGEF25Q86VW2 580 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 CPA6Q8N4T0 437 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 NUP133Q8WUM0 1156 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 HOXB13Q92826 284 aaPredicted RBP4.82□□□□□ -1.64
STRN3-204ENST00000554124 MED15Q96RN5 788 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 CCM2LQ9NUG4 571 aaPredicted RBP4.82□□□□□ -1.64
STRN3-204ENST00000554124 SLC17A6Q9P2U8 582 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 ANKRD6Q9Y2G4 727 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 SIK3Q9Y2K2 1263 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 CFAP43Q8NDM7 1665 aa4.82□□□□□ -1.64
STRN3-204ENST00000554124 MAPKBP1O60336 1514 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms