RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 C8orf34Q49A92 452 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 TMEM119Q4V9L6 283 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 CYP4A22Q5TCH4 519 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 ZBTB44Q8NCP5 570 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 APPL2Q8NEU8 664 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 SHKBP1Q8TBC3 707 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 ZSCAN18Q8TBC5 510 aaPredicted RBP19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 SMARCD2Q92925 531 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 KIF12Q96FN5 646 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 TMEM209Q96SK2 561 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 NELL2Q99435 816 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 TIPINQ9BVW5 301 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 DNAJC25Q9H1X3 360 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 ZNF334Q9HCZ1 680 aaPredicted RBP19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 DNAH14Q0VDD8 3507 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 FAM189A1O60320 539 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 OAZ2O95190 189 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 CD2BP2O95400 341 aaKnown RBP19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 CLTAP09496 248 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 MARCKSP29966 332 aaPredicted RBP19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 LRPAP1P30533 357 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 RPS9P46781 194 aaKnown RBP19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 SMTNP53814 917 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 EPHA5P54756 1037 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 NCKAP1LP55160 1127 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 IQCEQ6IPM2 695 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 HAUS6Q7Z4H7 955 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 TTC9BQ8N6N2 239 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 BEST2Q8NFU1 509 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 ATRIPQ8WXE1 791 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 DNASE1L2Q92874 299 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 ZSCAN32Q9NX65 697 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 SLC27A5Q9Y2P5 690 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 YIPF1Q9Y548 306 aa19.49■□□□□ 0.71
PRPF40B-215ENST00000551418 LILRB5O75023 590 aa19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 SOAT2O75908 522 aa19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 PSMC3P17980 439 aa19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 AARSP49588 968 aaKnown RBP eCLIP19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 YWHAHQ04917 246 aaPredicted RBP19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 DUSP4Q13115 394 aa19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 DHX8Q14562 1220 aaKnown RBP19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 ENOX2Q16206 610 aaKnown RBP19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 RILPL1Q5EBL4 403 aa19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 STXBP5Q5T5C0 1151 aa19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 DGLUCYQ7Z3D6 616 aa19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 TMC8Q8IU68 726 aa19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 BICD1Q96G01 975 aa19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 PLEKHA5Q9HAU0 1116 aa19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 PRMT8Q9NR22 394 aaPredicted RBP19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 PCDHGA2Q9Y5H1 932 aa19.48■□□□□ 0.71
PRPF40B-215ENST00000551418 SPTLC1O15269 473 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 NCAM2O15394 837 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 TDGF1P13385 188 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 MAGEA9P43362 315 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 GRIN1Q05586 938 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 SLC39A4Q6P5W5 647 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 ELMOD1Q8N336 334 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 ATAD1Q8NBU5 361 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 LRRC3BQ96PB8 259 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 REEP2Q9BRK0 252 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 LMAN1LQ9HAT1 526 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 ASAH2Q9NR71 780 aa19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 MRPS17Q9Y2R5 130 aaKnown RBP19.47■□□□□ 0.71
PRPF40B-215ENST00000551418 SCN1AP35498 2009 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 A0A1W2PRU2 124 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 HEPACAM2A8MVW5 462 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 ARNTLO00327 626 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 HOXC13P31276 330 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 SOX9P48436 509 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 GAS6Q14393 721 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 RSPO4Q2I0M5 234 aaPredicted RBP19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 WDR44Q5JSH3 913 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 DSTYKQ6XUX3 929 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 GPBP1Q86WP2 473 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 MFSD6LQ8IWD5 586 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 FAM3CQ92520 227 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 IRF7Q92985 503 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 FAM212AQ96EL1 285 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 CDK5RAP3Q96JB5 506 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 TMX3Q96JJ7 454 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 IKZF4Q9H2S9 585 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 CHRDQ9H2X0 955 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 TRPV4Q9HBA0 871 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 BLOC1S4Q9NUP1 217 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 DLL3Q9NYJ7 618 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 NCDNQ9UBB6 729 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 TBX20Q9UMR3 447 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 UBQLN1Q9UMX0 589 aaKnown RBP19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 SMG5Q9UPR3 1016 aaKnown RBP19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 PIAS3Q9Y6X2 628 aa19.46■□□□□ 0.71
PRPF40B-215ENST00000551418 NCOR2Q9Y618 2525 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 TISP43B9A030 160 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 MAN2B1O00754 1011 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 ADRB2P07550 413 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 TGM1P22735 817 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 CCNE1P24864 410 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 GJB2P29033 226 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 LIG4P49917 911 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 PPP2R3AQ06190 1150 aa19.45■□□□□ 0.7
PRPF40B-215ENST00000551418 MCM6Q14566 821 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms