RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 REPIN1Q9BWE0 567 aaKnown RBP6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 DPH1Q9BZG8 443 aa6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 GAREM1Q9H706 876 aa6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 IL21RQ9HBE5 538 aa6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 OBP2AQ9NY56 170 aa6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 ANAPC4Q9UJX5 808 aa6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 BTBD3Q9Y2F9 522 aa6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 FNDC3AQ9Y2H6 1198 aaKnown RBP6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 PCDHGB2Q9Y5G2 931 aa6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 ANKHD1Q8IWZ3 2542 aaKnown RBP6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 PLXND1Q9Y4D7 1925 aa6.35□□□□□ -1.39
SCARNA21.2-201ENST00000516600 NFASCO94856 1347 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 IGKV6D-21A0A0A0MT36 114 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 DIAPH2O60879 1101 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 PPFIA2O75334 1257 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 AGFG2O95081 481 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 ATG7O95352 703 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 ITGB2P05107 769 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 FGRP09769 529 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 CDK4P11802 303 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 ITGB6P18564 788 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 DCTP40126 519 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 MATKP42679 507 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 GRK6P43250 576 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 INHBCP55103 352 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 CDC42EP1Q00587 391 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 SCRN1Q12765 414 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 RUNX3Q13761 415 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 SYCP2LQ5T4T6 812 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 SWSAP1Q6NVH7 229 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 USP17L6PQ6QN14 398 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 IL27RAQ6UWB1 636 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 CCDC33Q8N5R6 958 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 TRIML1Q8N9V2 468 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 CNNM3Q8NE01 707 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 SHKBP1Q8TBC3 707 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 ARHGAP45Q92619 1136 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 MTMR8Q96EF0 704 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 KIF1BPQ96EK5 621 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 ZFP42Q96MM3 310 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 ZNF578Q96N58 590 aaPredicted RBP6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 EPN3Q9H201 632 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 EBF3Q9H4W6 596 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 CYP4F11Q9HBI6 524 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 KCNH7Q9NS40 1196 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 GKN1Q9NS71 199 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 AGPAT5Q9NUQ2 364 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 GMIPQ9P107 970 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 MTRRQ9UBK8 725 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 FTSJ1Q9UET6 329 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 MMP17Q9ULZ9 603 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 INSL5Q9Y5Q6 135 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 UBIAD1Q9Y5Z9 338 aa6.34□□□□□ -1.39
SCARNA21.2-201ENST00000516600 MED13LQ71F56 2210 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 A0A087WZ62 844 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 A0A1W2PRU2 124 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ESYT2A0FGR8 921 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 A1L4Q6 167 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 VPS37CA5D8V6 355 aaPredicted RBP6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 OTOL1A6NHN0 477 aaPredicted RBP6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 KLRF2D3W0D1 207 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 DDX39AO00148 427 aaKnown RBP6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SREBF1P36956 1147 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 EPHA5P54756 1037 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SEC13P55735 322 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 DDX10Q13206 875 aaKnown RBP6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 NCAPHQ15003 741 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SART3Q15020 963 aaKnown RBP6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 NAIF1Q69YI7 327 aaPredicted RBP6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 MIS18BP1Q6P0N0 1132 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ABHD15Q6UXT9 468 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 CCDC81Q6ZN84 652 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 NFXL1Q6ZNB6 911 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 DBX2Q6ZNG2 339 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 DGKHQ86XP1 1220 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SLC41A1Q8IVJ1 513 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 KRI1Q8N9T8 703 aaKnown RBP6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ZNF461Q8TAF7 563 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 USP33Q8TEY7 942 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 EZH1Q92800 747 aaPredicted RBP6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 CD101Q93033 1021 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 FDXACB1Q9BRP7 624 aaPredicted RBP6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ZKSCAN3Q9BRR0 538 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 LY9Q9HBG7 655 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 HPS4Q9NQG7 708 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 MIOSQ9NXC5 875 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 PCDHGA1Q9Y5H4 931 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 KIAA1549LQ6ZVL6 1849 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 BSNQ9UPA5 3926 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 MED13Q9UHV7 2174 aa6.33□□□□□ -1.4
SCARNA21.2-201ENST00000516600 MYO16Q9Y6X6 1858 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 IPO5O00410 1097 aaKnown RBP6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 RFPL3O75679 317 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 KIF4AO95239 1232 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 CCNE2O96020 404 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 PRKCBP05771 671 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 FAM87AP0C7U9 286 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ATP4AP20648 1035 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ROR1Q01973 937 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms