RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 AMOTL1Q8IY63 956 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 NME8Q8N427 588 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 ZSCAN18Q8TBC5 510 aaPredicted RBP5.39□□□□□ -1.55
CSTF1-207ENST00000498689 KCNE4Q8WWG9 221 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 CDC6Q99741 560 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 IL17RBQ9NRM6 502 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 ERAP1Q9NZ08 941 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 FNIP2Q9P278 1114 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 SSX2IPQ9Y2D8 614 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 PCDHA1Q9Y5I3 950 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 SLC4A4Q9Y6R1 1079 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 TDRD6O60522 2096 aaKnown RBP5.39□□□□□ -1.55
CSTF1-207ENST00000498689 ABCB11O95342 1321 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 WDR19Q8NEZ3 1342 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 PKDREJQ9NTG1 2253 aa5.39□□□□□ -1.55
CSTF1-207ENST00000498689 TLN2Q9Y4G6 2542 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 RRN3P2A6NIE6 340 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 KIAA1324LA8MWY0 1029 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-207ENST00000498689 TULP1O00294 542 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-207ENST00000498689 TNFSF14O43557 240 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 CILPO75339 1184 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 CSDE1O75534 798 aaKnown RBP5.38□□□□□ -1.55
CSTF1-207ENST00000498689 C1RP00736 705 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 POMCP01189 267 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 ALDH2P05091 517 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 HSPD1P10809 573 aaKnown RBP5.38□□□□□ -1.55
CSTF1-207ENST00000498689 KLRC1P26715 233 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 HOXA9P31269 272 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 HOXA13P31271 388 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-207ENST00000498689 HOXD12P35452 270 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 CLCN1P35523 988 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 HNF1BP35680 557 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 PHKA2P46019 1235 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 CRYBB1P53674 252 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-207ENST00000498689 OXCT1P55809 520 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 TFAP4Q01664 338 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 BNC1Q01954 994 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 FCHO2Q0JRZ9 810 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 WDR43Q15061 677 aaKnown RBP eCLIP5.38□□□□□ -1.55
CSTF1-207ENST00000498689 MAP7D1Q3KQU3 841 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 RTP2Q5QGT7 225 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 MRPL14Q6P1L8 145 aaKnown RBP5.38□□□□□ -1.55
CSTF1-207ENST00000498689 ZNF444Q8N0Y2 327 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-207ENST00000498689 NEDD1Q8NHV4 660 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 RABGGTAQ92696 567 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 CLUAP1Q96AJ1 413 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 MIB2Q96AX9 1013 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 CNOT6LQ96LI5 555 aaKnown RBP5.38□□□□□ -1.55
CSTF1-207ENST00000498689 SEMA3CQ99985 751 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 ARHGAP9Q9BRR9 750 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 UNKQ9C0B0 810 aaKnown RBP5.38□□□□□ -1.55
CSTF1-207ENST00000498689 GAREM1Q9H706 876 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 TM7SF3Q9NS93 570 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 RTEL1Q9NZ71 1219 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 PNMA2Q9UL42 364 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 PCDHGC3Q9UN70 934 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 STX8Q9UNK0 236 aa5.38□□□□□ -1.55
CSTF1-207ENST00000498689 TNRC6AQ8NDV7 1962 aaKnown RBP5.37□□□□□ -1.55
CSTF1-207ENST00000498689 SCN8AQ9UQD0 1980 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 SPATA31C2B4DYI2 1134 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 N4BP3O15049 544 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 MTSS1O43312 755 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 RPLP2P05387 115 aaKnown RBP5.37□□□□□ -1.55
CSTF1-207ENST00000498689 TSPY3P0CV98 308 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 TSPY8P0CW00 308 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 MAOBP27338 520 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 CASRP41180 1078 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 OR1G1P47890 313 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 WDR4P57081 412 aaKnown RBP5.37□□□□□ -1.55
CSTF1-207ENST00000498689 PTH1RQ03431 593 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 ZNF33AQ06730 810 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 GRSF1Q12849 480 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSTF1-207ENST00000498689 DNAJC3Q13217 504 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 SRSF6Q13247 344 aaKnown RBP5.37□□□□□ -1.55
CSTF1-207ENST00000498689 NEDD9Q14511 834 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 ARL13BQ3SXY8 428 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 ODR4Q5SWX8 454 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 GLB1LQ6UWU2 654 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 CCDC81Q6ZN84 652 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 YAF2Q8IY57 180 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 SPATA3Q8NHX4 192 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 SMARCC2Q8TAQ2 1214 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 PI4K2BQ8TCG2 481 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 DCAF4Q8WV16 495 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 CORO1BQ9BR76 489 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 SLC25A18Q9H1K4 315 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 TRPV4Q9HBA0 871 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 AVENQ9NQS1 362 aaPredicted RBP5.37□□□□□ -1.55
CSTF1-207ENST00000498689 SMC4Q9NTJ3 1288 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 DONSONQ9NYP3 566 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 CACNG4Q9UBN1 327 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 UBE4BO95155 1302 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 MN1Q10571 1320 aaPredicted RBP5.37□□□□□ -1.55
CSTF1-207ENST00000498689 PHLPP2Q6ZVD8 1323 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 ANK2Q01484 3957 aa5.37□□□□□ -1.55
CSTF1-207ENST00000498689 TRDMT1O14717 391 aaKnown RBP5.36□□□□□ -1.55
CSTF1-207ENST00000498689 PPFIA2O75334 1257 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 MPOP05164 745 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 POU2F2P09086 479 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 DRD2P14416 443 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms