RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 SLITRK6Q9H5Y7 841 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 TNFSF13BQ9Y275 285 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 CYP46A1Q9Y6A2 500 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 A0A087WWV3 80 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 TMEM8BA6NDV4 472 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 NEMFO60524 1076 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 KCNE1P15382 129 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 TXKP42681 527 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 STK3Q13188 491 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 PLD1Q13393 1074 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 HAUS6Q7Z4H7 955 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 CATSPER3Q86XQ3 398 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 TMC8Q8IU68 726 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 APPL2Q8NEU8 664 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 ZC3H10Q96K80 434 aaKnown RBP15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 VPS45Q9NRW7 570 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 GJB4Q9NTQ9 266 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 ZMIZ1Q9ULJ6 1067 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 YIPF1Q9Y548 306 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 NUB1Q9Y5A7 615 aa15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 ANKRD11Q6UB99 2663 aaPredicted RBP15.61■□□□□ 0.09
PRPF40A-211ENST00000493468 PKD1L2Q7Z442 2459 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 EPB41L2O43491 1005 aaKnown RBP15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 REC8O95072 547 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 LIG1P18858 919 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 WEE1P30291 646 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 KRT2P35908 639 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 MPLP40238 635 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 PLCB2Q00722 1185 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 NR5A1Q13285 461 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 PON2Q15165 354 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 CCDC6Q16204 474 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 PSAPL1Q6NUJ1 521 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 PADI6Q6TGC4 694 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 KBTBD6Q86V97 674 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 ZMAT2Q96NC0 199 aaKnown RBP15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 POLR3CQ9BUI4 534 aaPredicted RBP15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 OXCT2Q9BYC2 517 aaPredicted RBP15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 TM6SF1Q9BZW5 370 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 CDT1Q9H211 546 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 BRMS1Q9HCU9 246 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 CNTN3Q9P232 1028 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 NUP205Q92621 2012 aa15.6■□□□□ 0.09
PRPF40A-211ENST00000493468 A0A1W2PRU2 124 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 C1QTNF9BB2RNN3 333 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 EXTL3O43909 919 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 MED24O75448 989 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 C1QTNF9P0C862 333 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 CPB1P15086 417 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 SCRN1Q12765 414 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 RNF43Q68DV7 783 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 RNF19BQ6ZMZ0 732 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 ARID3BQ8IVW6 561 aaPredicted RBP15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 CEP120Q8N960 986 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 WASF1Q92558 559 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 DDX12PQ92771 950 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 KIFAP3Q92845 792 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 IFT74Q96LB3 600 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 MKNK1Q9BUB5 465 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 KIFC3Q9BVG8 833 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 TMEM121BQ9BXQ6 578 aaPredicted RBP15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 PTPRHQ9HD43 1115 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 GTSE1Q9NYZ3 720 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 TPCN1Q9ULQ1 816 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 PCDHB8Q9UN66 801 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 WASF3Q9UPY6 502 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 WDFY3Q8IZQ1 3526 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 PHLPP2Q6ZVD8 1323 aa15.59■□□□□ 0.09
PRPF40A-211ENST00000493468 ARHGEF35A5YM69 484 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 ATG13O75143 517 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 FGF19O95750 216 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 CCDC192P0DO97 292 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 RPA1P27694 616 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 HOXC13P31276 330 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 MCM4P33991 863 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 ZNF568Q3ZCX4 644 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 SKAP1Q86WV1 359 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 LRRC3BQ96PB8 259 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 LARP6Q9BRS8 491 aaKnown RBP15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 DNAJC25Q9H1X3 360 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 ASB3Q9Y575 518 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 KIAA1549LQ6ZVL6 1849 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 DENND4CQ5VZ89 1909 aa15.58■□□□□ 0.08
PRPF40A-211ENST00000493468 K7ERI5 159 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 DPYSL4O14531 572 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 OAZ2O95190 189 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 VNN2O95498 520 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 HOXB3P14651 431 aaPredicted RBP15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 MUTP22033 750 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 NOVA1P51513 510 aaKnown RBP15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 EPHB3P54753 998 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 IRX6P78412 446 aaPredicted RBP15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 PTPAQ15257 358 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 ITPRIPL2Q3MIP1 535 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 CAMKK1Q8N5S9 505 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 TBC1D32Q96NH3 1257 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 ACAP3Q96P50 834 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 TMEM209Q96SK2 561 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 ACO2Q99798 780 aaKnown RBP15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 EDEM2Q9BV94 578 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms