RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 C19orf57Q0VDD7 668 aa15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 GRSF1Q12849 480 aaKnown RBP eCLIP15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 TPGS2Q68CL5 300 aa15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 RAB44Q7Z6P3 723 aaPredicted RBP15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 TMC8Q8IU68 726 aa15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 PIGKQ92643 395 aa15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 PPP1R10Q96QC0 940 aaKnown RBP15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 LSG1Q9H089 658 aaKnown RBP15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 CCDC86Q9H6F5 360 aaKnown RBP15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 FBRSL1Q9HCM7 1045 aaKnown RBP15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 USP20Q9Y2K6 914 aa15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 RAXQ9Y2V3 346 aa15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 PRPF3O43395 683 aaKnown RBP15.08■□□□□ 0
EXOSC3-207ENST00000490516 SLC37A4O43826 429 aa15.08■□□□□ 0
EXOSC3-207ENST00000490516 APBB3O95704 486 aa15.08■□□□□ 0
EXOSC3-207ENST00000490516 RDXP35241 583 aaKnown RBP15.08■□□□□ 0
EXOSC3-207ENST00000490516 DHPSP49366 369 aaPredicted RBP15.08■□□□□ 0
EXOSC3-207ENST00000490516 DGKEP52429 567 aa15.08■□□□□ 0
EXOSC3-207ENST00000490516 EXOSC10Q01780 885 aaKnown RBP15.08■□□□□ 0
EXOSC3-207ENST00000490516 SEMA3BQ13214 749 aa15.08■□□□□ 0
EXOSC3-207ENST00000490516 CTTNQ14247 550 aaKnown RBP15.08■□□□□ 0
EXOSC3-207ENST00000490516 TRIM61Q5EBN2 209 aa15.08■□□□□ 0
EXOSC3-207ENST00000490516 RNF19BQ6ZMZ0 732 aa15.08■□□□□ 0
EXOSC3-207ENST00000490516 MDM1Q8TC05 714 aa15.08■□□□□ 0
EXOSC3-207ENST00000490516 DYDC2Q96IM9 177 aa15.08■□□□□ 0
EXOSC3-207ENST00000490516 TPSD1Q9BZJ3 242 aa15.08■□□□□ 0
EXOSC3-207ENST00000490516 EBF1Q9UH73 591 aa15.08■□□□□ 0
EXOSC3-207ENST00000490516 DDX25Q9UHL0 483 aaKnown RBP15.08■□□□□ 0
EXOSC3-207ENST00000490516 ZNF638Q14966 1978 aaKnown RBP15.07■□□□□ 0
EXOSC3-207ENST00000490516 OTOL1A6NHN0 477 aaPredicted RBP15.07■□□□□ 0
EXOSC3-207ENST00000490516 H7C4K7 107 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 TRDMT1O14717 391 aaKnown RBP15.07■□□□□ 0
EXOSC3-207ENST00000490516 PRAMEF12O95522 483 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 CYP4A11Q02928 519 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 SOX4Q06945 474 aaPredicted RBP15.07■□□□□ 0
EXOSC3-207ENST00000490516 LMAN2Q12907 356 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 MRPL58Q14197 206 aaKnown RBP15.07■□□□□ 0
EXOSC3-207ENST00000490516 NECTIN1Q15223 517 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 CTXN3Q4LDR2 81 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 PPP4R3CPQ6ZMV5 832 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 CCDC148Q8NFR7 591 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 RPLP0P6Q8NHW5 317 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 BPIFB1Q8TDL5 484 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 CRELD1Q96HD1 420 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 UROC1Q96N76 676 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 DNAJC25Q9H1X3 360 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 AFF4Q9UHB7 1163 aaKnown RBP15.07■□□□□ 0
EXOSC3-207ENST00000490516 EVLQ9UI08 416 aaPredicted RBP15.07■□□□□ 0
EXOSC3-207ENST00000490516 YIPF1Q9Y548 306 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 PTPRBP23467 1997 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 GON4LQ3T8J9 2241 aa15.07■□□□□ 0
EXOSC3-207ENST00000490516 LRRIQ4A6NIV6 560 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 N4BP3O15049 544 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 KALRNO60229 2985 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 C1QL1O75973 258 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 ENGP17813 658 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 U2AF2P26368 475 aaKnown RBP eCLIP15.06■□□□□ 05e-10■■■■■ 27.4
EXOSC3-207ENST00000490516 PLCB2Q00722 1185 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 DMC1Q14565 340 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 TMEM132AQ24JP5 1023 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 NAIF1Q69YI7 327 aaPredicted RBP15.06■□□□□ 0
EXOSC3-207ENST00000490516 GAREM2Q75VX8 874 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 SYT13Q7L8C5 426 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 NUSAP1Q9BXS6 441 aaKnown RBP15.06■□□□□ 0
EXOSC3-207ENST00000490516 SMG9Q9H0W8 520 aaKnown RBP15.06■□□□□ 0
EXOSC3-207ENST00000490516 POLR3FQ9H1D9 316 aaPredicted RBP15.06■□□□□ 0
EXOSC3-207ENST00000490516 HPS4Q9NQG7 708 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 GKN1Q9NS71 199 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 PRMT7Q9NVM4 692 aaPredicted RBP15.06■□□□□ 0
EXOSC3-207ENST00000490516 OBP2AQ9NY56 170 aa15.06■□□□□ 0
EXOSC3-207ENST00000490516 MBD1Q9UIS9 605 aaPredicted RBP15.06■□□□□ 0
EXOSC3-207ENST00000490516 CEP192Q8TEP8 1941 aa15.05■□□□□ 0
EXOSC3-207ENST00000490516 UPK3BL1B0FP48 263 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 UPK3BL2E5RIL1 263 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 NLRP5P59047 1200 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 PTPAQ15257 358 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 EPHA7Q15375 998 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 ZNF423Q2M1K9 1284 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 USP39Q53GS9 565 aaKnown RBP15.05■□□□□ -0
EXOSC3-207ENST00000490516 GPR158Q5T848 1215 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 EEF1DP3Q658K8 133 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 TRIM68Q6AZZ1 485 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 NCAPH2Q6IBW4 605 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 TPH2Q8IWU9 490 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 PIAS4Q8N2W9 510 aaPredicted RBP15.05■□□□□ -0
EXOSC3-207ENST00000490516 PRIMPOLQ96LW4 560 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 POLR3CQ9BUI4 534 aaPredicted RBP15.05■□□□□ -0
EXOSC3-207ENST00000490516 FZD8Q9H461 694 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 ZSWIM4Q9H7M6 989 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 SCUBE2Q9NQ36 999 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 FSCN3Q9NQT6 498 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 TMEM74BQ9NUR3 256 aa15.05■□□□□ -0
EXOSC3-207ENST00000490516 URB1O60287 2271 aaKnown RBP15.05■□□□□ -0
EXOSC3-207ENST00000490516 DENND4CQ5VZ89 1909 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 PODXLO00592 558 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 SYN3O14994 580 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 VNN2O95498 520 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 EDN1P05305 212 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 PLA2G2AP14555 144 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 CPB1P15086 417 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms