RNA–Protein interactions for RNA: ENST00000485781.5

MDH1-213, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-213ENST00000485781 TTC8Q8TAM2 541 aa12.62□□□□□ -0.39
MDH1-213ENST00000485781 INTS4Q96HW7 963 aaKnown RBP12.62□□□□□ -0.39
MDH1-213ENST00000485781 LOXL4Q96JB6 756 aa12.62□□□□□ -0.39
MDH1-213ENST00000485781 ANP32EQ9BTT0 268 aa12.62□□□□□ -0.39
MDH1-213ENST00000485781 KIFC3Q9BVG8 833 aa12.62□□□□□ -0.39
MDH1-213ENST00000485781 PDRG1Q9NUG6 133 aa12.62□□□□□ -0.39
MDH1-213ENST00000485781 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
MDH1-213ENST00000485781 MAFFQ9ULX9 164 aa12.62□□□□□ -0.39
MDH1-213ENST00000485781 CEP295Q9C0D2 2601 aa12.62□□□□□ -0.39
MDH1-213ENST00000485781 COL4A2P08572 1712 aa12.62□□□□□ -0.39
MDH1-213ENST00000485781 A0A1W2PRU2 124 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 ARNTLO00327 626 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 DTNBO60941 627 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 MOSPD3O75425 235 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 PROS1P07225 676 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 SPATA31C1P0DKV0 1188 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 CTHP32929 405 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 RPL9P32969 192 aaKnown RBP12.61□□□□□ -0.39
MDH1-213ENST00000485781 GRM5P41594 1212 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 EPHA5P54756 1037 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 NUCB2P80303 420 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 SCRN1Q12765 414 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 PLD1Q13393 1074 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 ZNF568Q3ZCX4 644 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 NT5DC1Q5TFE4 455 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 CACNA2D4Q7Z3S7 1137 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 CATSPER3Q86XQ3 398 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 ERMNQ8TAM6 284 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 SHKBP1Q8TBC3 707 aa12.61□□□□□ -0.39
MDH1-213ENST00000485781 PDCD11Q14690 1871 aaKnown RBP12.61□□□□□ -0.39
MDH1-213ENST00000485781 GREB1Q4ZG55 1949 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 SPAG17Q6Q759 2223 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 MYBPHLA2RUH7 354 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 MED24O75448 989 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 RPP40O75818 363 aaKnown RBP12.6□□□□□ -0.39
MDH1-213ENST00000485781 EPN2O95208 641 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 HOXA6P31267 233 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 EPHB3P54753 998 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 COL9A2Q14055 689 aaPredicted RBP12.6□□□□□ -0.39
MDH1-213ENST00000485781 MRPL58Q14197 206 aaKnown RBP12.6□□□□□ -0.39
MDH1-213ENST00000485781 ARHGAP29Q52LW3 1261 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 TXNDC11Q6PKC3 985 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 RNF19BQ6ZMZ0 732 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 GPIHBP1Q8IV16 184 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 ARID3BQ8IVW6 561 aaPredicted RBP12.6□□□□□ -0.39
MDH1-213ENST00000485781 SYNPOQ8N3V7 929 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 CEP120Q8N960 986 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 GAB3Q8WWW8 586 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 KIFAP3Q92845 792 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 SUSD3Q96L08 255 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 ACAP3Q96P50 834 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 TCHPQ9BT92 498 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 POLD4Q9HCU8 107 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 LIMCH1Q9UPQ0 1083 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 TNFSF13BQ9Y275 285 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 YIPF1Q9Y548 306 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 NCANO14594 1321 aa12.6□□□□□ -0.39
MDH1-213ENST00000485781 CCDC169A6NNP5 214 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 TM4SF5O14894 197 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 KCNK5O95279 499 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 HARSP12081 509 aaKnown RBP12.59□□□□□ -0.39
MDH1-213ENST00000485781 PTMSP20962 102 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 ALDH1A3P47895 512 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 PXNP49023 591 aaPredicted RBP12.59□□□□□ -0.39
MDH1-213ENST00000485781 FCHO2Q0JRZ9 810 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 PTPAQ15257 358 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 ARHGAP15Q53QZ3 475 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 RNF43Q68DV7 783 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 PSAPL1Q6NUJ1 521 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 KBTBD6Q86V97 674 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 DDX12PQ92771 950 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 RSPRY1Q96DX4 576 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 ZFYVE19Q96K21 471 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 MTMR9Q96QG7 549 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 POLR3CQ9BUI4 534 aaPredicted RBP12.59□□□□□ -0.39
MDH1-213ENST00000485781 CDT1Q9H211 546 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 ATXN3LQ9H3M9 355 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 RXFP3Q9NSD7 469 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 C2orf42Q9NWW7 574 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 GTSE1Q9NYZ3 720 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 SLC8A2Q9UPR5 921 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 PCDHGA5Q9Y5G8 931 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 ZFHX4Q86UP3 3567 aa12.59□□□□□ -0.39
MDH1-213ENST00000485781 EXTL3O43909 919 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 PFKFB2O60825 505 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 KCNE1P15382 129 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 RPA1P27694 616 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 MCM7P33993 719 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 MPLP40238 635 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 FOSBP53539 338 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 PLCB2Q00722 1185 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 YWHAHQ04917 246 aaPredicted RBP12.58□□□□□ -0.4
MDH1-213ENST00000485781 CUL4AQ13619 759 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 TRIM29Q14134 588 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 XKR4Q5GH76 650 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 GPR158Q5T848 1215 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 ALKAL1Q6UXT8 129 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 USP37Q86T82 979 aa12.58□□□□□ -0.4
MDH1-213ENST00000485781 DIS3L2Q8IYB7 885 aaKnown RBP12.58□□□□□ -0.4
MDH1-213ENST00000485781 TNFRSF25Q93038 417 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms