RNA–Protein interactions for RNA: ENST00000483342.5

SNHG11-215, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 1 (best)

Gene SNHG11, Length 1,509 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-215ENST00000483342 TRIM44Q96DX7 344 aaPredicted RBP18.22■□□□□ 0.51
SNHG11-215ENST00000483342 MMS19Q96T76 1030 aa18.22■□□□□ 0.51
SNHG11-215ENST00000483342 PRO3102Q9H379 93 aa18.22■□□□□ 0.51
SNHG11-215ENST00000483342 SPTLC1O15269 473 aa18.21■□□□□ 0.51
SNHG11-215ENST00000483342 TRAPPC3O43617 180 aa18.21■□□□□ 0.51
SNHG11-215ENST00000483342 KIF4AO95239 1232 aa18.21■□□□□ 0.51
SNHG11-215ENST00000483342 STAU1O95793 577 aaKnown RBP18.21■□□□□ 0.51
SNHG11-215ENST00000483342 KLK7P49862 253 aa18.21■□□□□ 0.51
SNHG11-215ENST00000483342 RAB30Q15771 203 aa18.21■□□□□ 0.51
SNHG11-215ENST00000483342 NEK11Q8NG66 645 aa18.21■□□□□ 0.51
SNHG11-215ENST00000483342 CLP1Q92989 425 aaKnown RBP18.21■□□□□ 0.51
SNHG11-215ENST00000483342 VRTNQ9H8Y1 702 aa18.21■□□□□ 0.51
SNHG11-215ENST00000483342 FAM207AQ9NSI2 230 aaPredicted RBP18.21■□□□□ 0.51
SNHG11-215ENST00000483342 SPG21Q9NZD8 308 aa18.21■□□□□ 0.51
SNHG11-215ENST00000483342 ADAM28Q9UKQ2 775 aa18.21■□□□□ 0.51
SNHG11-215ENST00000483342 SIK3Q9Y2K2 1263 aa18.21■□□□□ 0.51
SNHG11-215ENST00000483342 SNX9Q9Y5X1 595 aa18.21■□□□□ 0.51
SNHG11-215ENST00000483342 LINC01553A4QN01 128 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 F8W810 466 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 TMEM189-UBE2V1I3L0A0 370 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 CYB561D2O14569 222 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 ADCY5O95622 1261 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 ITGB1P05556 798 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 CA3P07451 260 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 TIGD5Q53EQ6 642 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 HS1BP3Q53T59 392 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 PPM1KQ8N3J5 372 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 SENP8Q96LD8 212 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 PBX4Q9BYU1 374 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 APOBEC3GQ9HC16 384 aaKnown RBP18.2■□□□□ 0.5
SNHG11-215ENST00000483342 UBE2TQ9NPD8 197 aaPredicted RBP18.2■□□□□ 0.5
SNHG11-215ENST00000483342 APEX2Q9UBZ4 518 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 RWDD3Q9Y3V2 267 aa18.2■□□□□ 0.5
SNHG11-215ENST00000483342 FNDC1Q4ZHG4 1894 aaPredicted RBP18.2■□□□□ 0.5
SNHG11-215ENST00000483342 HUS1O60921 280 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 TRIM21P19474 475 aaKnown RBP18.19■□□□□ 0.5
SNHG11-215ENST00000483342 PPM1AP35813 382 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 BMPR1AP36894 532 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 PBX2P40425 430 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 BRCC3P46736 316 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 APBA1Q02410 837 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 KLHDC7AQ5VTJ3 777 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 PHLDB3Q6NSJ2 640 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 CD300LGQ6UXG3 332 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 RRAGAQ7L523 313 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 TMEM169Q96HH4 297 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 MRFAP1L1Q96HT8 127 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 IGSF21Q96ID5 467 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 NIF3L1Q9GZT8 377 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 PLCB1Q9NQ66 1216 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 GDAP2Q9NXN4 497 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 POLIQ9UNA4 740 aa18.19■□□□□ 0.5
SNHG11-215ENST00000483342 YBX2Q9Y2T7 364 aaKnown RBP18.19■□□□□ 0.5
SNHG11-215ENST00000483342 TDRD15B5MCY1 1934 aaKnown RBP18.19■□□□□ 0.5
SNHG11-215ENST00000483342 ARHGEF37A1IGU5 675 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 I3L4J1 428 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 TBXAS1P24557 533 aaPredicted RBP18.18■□□□□ 0.5
SNHG11-215ENST00000483342 CTNNB1P35222 781 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 PBX1P40424 430 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 MFAP3P55082 362 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 KRT17Q04695 432 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 ELAVL2Q12926 359 aaKnown RBP18.18■□□□□ 0.5
SNHG11-215ENST00000483342 ARHGEF19Q8IW93 802 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 DRC7Q8IY82 874 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 SLC39A11Q8N1S5 342 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 APPL2Q8NEU8 664 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 FAXDC2Q96IV6 333 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 SUSD3Q96L08 255 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 FAM81BQ96LP2 452 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 NUP58Q9BVL2 599 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 SIX2Q9NPC8 291 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 MARCH5Q9NX47 278 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNHG11-215ENST00000483342 UCHL3P15374 230 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 AARSP49588 968 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNHG11-215ENST00000483342 POLR2FP61218 127 aaKnown RBP18.18■□□□□ 0.5
SNHG11-215ENST00000483342 SPECC1LQ69YQ0 1117 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 FUT10Q6P4F1 479 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 GJB7Q6PEY0 223 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 SCARA5Q6ZMJ2 495 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 DPH6Q7L8W6 267 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 TMEM173Q86WV6 379 aaPredicted RBP18.18■□□□□ 0.5
SNHG11-215ENST00000483342 VSTM4Q8IW00 320 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 NKX2-4Q9H2Z4 354 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 DNAJC12Q9UKB3 198 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 COL4A6Q14031 1691 aa18.18■□□□□ 0.5
SNHG11-215ENST00000483342 PTPRSQ13332 1948 aa18.17■□□□□ 0.5
SNHG11-215ENST00000483342 SF3B1O75533 1304 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNHG11-215ENST00000483342 LAMA3Q16787 3333 aa18.17■□□□□ 0.5
SNHG11-215ENST00000483342 FGF18O76093 207 aa18.17■□□□□ 0.5
SNHG11-215ENST00000483342 WEE2P0C1S8 567 aa18.17■□□□□ 0.5
SNHG11-215ENST00000483342 LINC00271P0C7V0 271 aa18.17■□□□□ 0.5
SNHG11-215ENST00000483342 ODC1P11926 461 aa18.17■□□□□ 0.5
SNHG11-215ENST00000483342 SMAD3P84022 425 aaKnown RBP18.17■□□□□ 0.5
SNHG11-215ENST00000483342 GCNT1Q02742 428 aa18.17■□□□□ 0.5
SNHG11-215ENST00000483342 CUL2Q13617 745 aa18.17■□□□□ 0.5
SNHG11-215ENST00000483342 HABP4Q5JVS0 413 aaKnown RBP18.17■□□□□ 0.5
SNHG11-215ENST00000483342 FAM171A1Q5VUB5 890 aa18.17■□□□□ 0.5
SNHG11-215ENST00000483342 ENOSF1Q7L5Y1 443 aa18.17■□□□□ 0.5
SNHG11-215ENST00000483342 CACNA2D4Q7Z3S7 1137 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms